Definition Yersinia pestis biovar Microtus str. 91001 chromosome, complete genome.
Accession NC_005810
Length 4,595,065

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The map label for this gene is rtn4

Identifier: 161511314

GI number:

Start: 3762792

End: 3764978

Strand: Reverse

Name: rtn4

Synonym: YP_3359

Alternate gene names: NA

Gene position: NA

Preceding gene: 45443109

Following gene: 45443107

Centisome position: NA

GC content: NA

Gene sequence:

>2187_bases
ATGGCGTTCCTAATAGGAAAAGACCGAAACCCACATTATTCTTGCCTTCCATTAGAGTATCGCAAGATAAAATCGGTAAG
CGATCGAGTATACTCAGACAGAATCGACGAGTGGTTAGAGGATAGTAACAACCACCTTATTTTATGCAGTCGGAATTGGC
GGAGAACGAGTTTGCGGGTAAGGCGCTCATTAACGATTAAACAAATGGCAGCGGTGGCAGTAGTTGCACTGGTGACTATC
TGTATTTTTATCATCCTTCAGTTGTTCCACTTTGTGCAACAGCGTAAAGATGATTATGCCAACCAGTTGGAAAGTATTGC
TTATTCGGTTCGCCAACCCCTATCTGAGGCCATACTCAGCGTTGATATTCCACAAGCTAAAAAAATCCTCAACAGCCTAT
TACCTATTGGTATTCTTAGCCGTGCTGAAGTGATATTACCGAACCAAATACAGGTATTGCACGCAAACTTTCCAACAGAG
CGGCCCATTCCACACTGGGCCAAGCGGGTTTTCTCCTTGCCCGTACAGATAACCGTGCCTTTATATGCGTTGGAACGGGT
ACCCGCAAACCCTCAGCCCTTAGCGCATTTAGTCCTGCGTGCTGACTCTTTCCGTATGTATCAATTTATTCTCAGCGCTC
TGTCAGCCATGCTCTCAACATATTTGTTACTGGCATTGGTGTTATCGGTATCTATCGCTTGGTGTATTAATCGCCTGATT
ATTCACCCGCTGCGGGCAATGGCCAAAGAGCTGGAGGATATTGGTGACCACGGGGTGCTGCATCATCAACTGACGCTACC
GGCGCATCATCAGGATGATGAACTGGGTGTGTTGGTGCGTAATTACAACCGCAATCAGCAACTGTTAGCGGATGCCTATG
CTGATATGGGCCGCATTAGTCACCGTTTCCCGGTGACTGAATTGCCCAATCGGTCATTATTTATCAGCCTGCTGGAGAAA
GAAATTGCCTCCAGTACGCGTACAGATCACTTTCATCTGTTGGTGATTGGTATTGAAACCCTGCAAGAGGTTTCTGGCGC
CATGAGTGAAGCCCAGCACCAACAGTTATTGTTGACGATAGTACAGCGGATCGAGCAGTGCATTGATGACAGCGACCTGT
TAGCGCAACTGAGTAAAACTGAATTTGCCGTGTTAGCCAGAGGTACCCGCCGCTCATTCCCAGCCATGCAATTGGCTCGG
CGGATTATGTCGCAAGTGACCCAACCGCTGTTTTTCGACGAGATAACATTGCGCCCCAGTGCCAGTATTGGTATCACCCG
CTATCAGGCTCAACAGGACACTGCCGAATCCATGATGCGCAATGCCAGTACAGCAATGATGGCGGCTCATCATGAGGGGC
GTAATCAGATAATGGTATTTGAGCCTCATTTGATTGAAAAAACGCACAAGCGGCTGACGCAGGAAAATGACCTCTTACAG
GCGATTGAAAACCACGATTTCACGTTATTCTTACAACCTCAATGGGATATGAAGCGCCAGCAGGTTATCGGTGCGGAGGC
GCTACTGCGTTGGTGCCAACCAGATGGCAGCTACGTTTTACCGTCAGGCTTTGTTCACTTCGCCGAAGAGGAGGGGATGA
TGGTGCCACTGGGGAACTGGGTGCTAGAAGAAGCCTGCCGTATTCTGGCTGATTGGAAAGCACGCGGTGTTAGCCTGCCG
TTATCGGTGAATATATCGGGCTTACAGGTACAAAATAAACAGTTCTTGCCGCATTTGAAAACGCTCATTAGCCACTATCA
TATTGATCCACAACAATTGTTACTGGAAATTACCGAAACTGCCCAGATTCAGGATCTCGATGAAGCATTGAGGCTACTGC
GTGAGTTACAGGGGCTGGGGTTATTGATCGCGTTAGATGATTTTGGTATTGGCTACTCAAGCTTACGGTATCTTAACCAC
CTGAAAAGCTTGCCTATCCATATGATTAAGTTGGATAAGAGCTTTGTGAAAAATTTGCCAGAGGATGACGCGATAGCGCG
CATTATTAGCTGTGTTTCTGATGTACTAAAGGTACGTGTGATGGCCGAAGGGGTCGAAACAGAAGAGCAGCGCCAATGGT
TGCTAGAGCATGGCATTCAATGCGGCCAAGGCTTCCTTTTCTCTCCGCCACTGCCACGTGCAGAATTTGAAGCCCAGTAT
TTCAGCAGCGCTCACCACGTAAGTTAA

Upstream 100 bases:

>100_bases
CTTAAGGGATCACAACTTACTCGATGGGGACTAAAAAGGGGCGTCTAAACACCAAGCACTTGAACACCAAACGTCTGAAC
ACCAAAAACAGTACTGCGAA

Downstream 100 bases:

>100_bases
CTCTTTGTATGGCGGTGTCCACCAGCAGTACTTAACACGCCGAGAATCTGCAGTGAATGACCGCCTACCCACCGTCAATT
CTGACGACAGCCGATGACGC

Product: biofilm formation regulator HmsP

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>728_residues
MAFLIGKDRNPHYSCLPLEYRKIKSVSDRVYSDRIDEWLEDSNNHLILCSRNWRRTSLRVRRSLTIKQMAAVAVVALVTI
CIFIILQLFHFVQQRKDDYANQLESIAYSVRQPLSEAILSVDIPQAKKILNSLLPIGILSRAEVILPNQIQVLHANFPTE
RPIPHWAKRVFSLPVQITVPLYALERVPANPQPLAHLVLRADSFRMYQFILSALSAMLSTYLLLALVLSVSIAWCINRLI
IHPLRAMAKELEDIGDHGVLHHQLTLPAHHQDDELGVLVRNYNRNQQLLADAYADMGRISHRFPVTELPNRSLFISLLEK
EIASSTRTDHFHLLVIGIETLQEVSGAMSEAQHQQLLLTIVQRIEQCIDDSDLLAQLSKTEFAVLARGTRRSFPAMQLAR
RIMSQVTQPLFFDEITLRPSASIGITRYQAQQDTAESMMRNASTAMMAAHHEGRNQIMVFEPHLIEKTHKRLTQENDLLQ
AIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPLGNWVLEEACRILADWKARGVSLP
LSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEITETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNH
LKSLPIHMIKLDKSFVKNLPEDDAIARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPLPRAEFEAQY
FSSAHHVS

Sequences:
NA

Specific function: NA

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA