| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
Click here to switch to the map view.
The map label for this gene is 161509668
Identifier: 161509668
GI number: 161509668
Start: 1568900
End: 1570483
Strand: Reverse
Name: 161509668
Synonym: USA300HOU_1439
Alternate gene names: NA
Gene position: 1570483-1568900 (Counterclockwise)
Preceding gene: 161509669
Following gene: 161509667
Centisome position: 54.67
GC content: 30.43
Gene sequence:
>1584_bases ATGGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGATGTAGATTATGGTTC TTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTTTACAGTTTATAGAACTACTCATAATAGTTTTGTTT TTGATTTATTGATTTGTGAAAACTTCATAATTTATCATGGTGAAAAATATACAATTAAGCAGACAGCGCCAAAGGTTGAA GGTGATAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGTGGAATCAAATAAGCT TGATGACGACAGTAGCGAAACTGGTAAAACGCCAGAATACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAA AAACTTCGGTCAAAATGACCTATAAAATAATTGGAGATTTTAAGCGAAAAGTACCGATTGACGAATTAGGTAACAAAAAC GGCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAATGATACAGAGATTGGTTTTTATTC TCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGATTCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTA CATTGGAATTAAGAACAGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAGGAAAAGAAAAATTATAATCCTATTAGA ACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCGAAACAATTGGGTCTAAAGCTACTAT TAACTTTGATTGCAAGTATGGTAATGAAACAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGA TTTTAGACGGCAAGCAAATTAAGCAAATTTCTTGTTTTGCTAAGTCGGTTCAGTCTGAAACAATAGATTTAATAAAAAAT ATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAAGACCCCAAAAATAGAATTGATATATCTTCAAATAA AAAAGCTAAGCCTTGTATGTATGTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATC AATACAAAGCAATTGTCGACTACGTCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAATACGCAAACAAATGAA GATATCGAAACACAGGATAAGCTGTTAGAATTTGCAAAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAA TTATATAGGTTATGAAAAAATAGAGCCAAGAGATAGCGTATTTTTTGTTCATGAATTAATGGGATATAACACTGAATTAA AGGTTGTTAAACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTTTCAGCAATGAAATAAAAGATATG GTACAAATTCAACAAGCACTTAACAGACGAGTTATTGCACAAGATAATAGATATAACTATCAAGCAAATCGTATAAATCA TTTATACACTAGTACTTTGAATTCTCCTTTCGAGACAATGGATATAGGGAGTGTATTAATATAA
Upstream 100 bases:
>100_bases TAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTCAGTGATATTAAAACTACATTTAAGTTTCCTTTT ATTTATAGGTAGGTGATTTA
Downstream 100 bases:
>100_bases TGGCAACAGAAGAAGTTAAAATCAAAGCGCTACTTGAAAACGATAAACAGTACTTTCCAGCTACACACTGGAAAGCTATA AATGGGATACCTTATGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVE GDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKN GLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIR TTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKN IDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNE DIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDM VQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
Sequences:
>Translated_527_residues MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVE GDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKN GLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIR TTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKN IDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNE DIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDM VQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI >Mature_527_residues MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVE GDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKN GLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIR TTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKN IDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNE DIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDM VQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60932; Mature: 60932
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICE CCCCCCCEEECHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCEEEHHHHC NFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEY CEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKNGLEYCKEAVDLFGCIIYPND CHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCCHHHCCCCCCHHHHHHHHHHHEEEEECCC TEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIR CCCEEECCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCE TTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQI EEEEEECCCCEECCCEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCHH KQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKS HHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCEECCCCCCCCCEEEECCCCC TVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTP EEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCC KTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDM CCEEEEEEECCCCCCCCCCEEEEEHHHCCCCEEEEEEEECCCCCHHHHHHCCHHHHHHHH VQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI HHHHHHHCCCEEECCCCCCEEHHHHHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICE CCCCCCCEEECHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCEEEHHHHC NFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEY CEEEEECCEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SLDEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKNGLEYCKEAVDLFGCIIYPND CHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCCHHHCCCCCCHHHHHHHHHHHEEEEECCC TEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIR CCCEEECCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCE TTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQI EEEEEECCCCEECCCEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCHH KQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKS HHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCEECCCCCCCCCEEEECCCCC TVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTP EEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCC KTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDM CCEEEEEEECCCCCCCCCCEEEEEHHHCCCCEEEEEEEECCCCCHHHHHHCCHHHHHHHH VQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI HHHHHHHCCCEEECCCCCCEEHHHHHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA