| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161509665
Identifier: 161509665
GI number: 161509665
Start: 1565218
End: 1566684
Strand: Reverse
Name: 161509665
Synonym: USA300HOU_1436
Alternate gene names: NA
Gene position: 1566684-1565218 (Counterclockwise)
Preceding gene: 161509666
Following gene: 161509664
Centisome position: 54.53
GC content: 33.4
Gene sequence:
>1467_bases ATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGAAAATATTTCAAATCTAGATATAAC TTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCATTAAAAATAATCAACCGTTATTACTGAGTGAAG AAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTAATGGTAGTTGCTCCACTAGAAATATTAGATCCATTTAAA GGTATTTTAAAATTTCAATTACCTAATGATGTAATTAAAAGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATT AGGTAATTCAGACGTGGTAGTTGTAGAGAGAACTATCACATTTAACGTTGAAAAAAGTTTGTTTAGCAAGATTCCCTCTG AAACAAAACTACACTATATTGTTGAGTTTCAAGAATTAGAAAAAACTATTATGGATCGCGCGAAAGCAATGGACGAGGCT ATAAAAAATGGTGAGGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGTCTATCAGATATTCAAATAGCAAAATC TTCAAGTATTGATGAATTAAAGCAACTTGCTAATAGCCGTATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAA CATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACA AGTGGTTCTACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTT TAATAATCCAGAACAAAGAATAGGTGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGATGTTA GTACTAACGGTACTGTCGAATATTTAGTAGTAACTTCAGATTACAAGCGTATGACTTATCGACCGAACGGTACAAATAAA GTGTTTGTTAAAAGAAAAGAAGCGGGTTCATGGTCTGAGTGGTCAGAATTAGCTATTAATGATTACAATACACCTTTTGA AACTGTTCAAAGTGCCCAATCAAAAGCTAATATGGCCGAAAGTAACGCTAAATTATACGCAGATGACAAGTTTAATAAAA GGTATTCGGTTATTTTTGATGGAACAGCAAATGGTGTGGGCTCTACATTGTACTTAAATGAGAGTTTAGACCAATTTATT TTATTAATTTTTTATGGGACTTTTCCAGGTGGTGACTTTACAGAGTTTGGCAGTCCTTTTGGAGGAGGAAAGATTTCATT GAATCCCTCAAATCTTCCAGATGGTGATGGAAATGGTGGAGGTGTTTATGAGTTTGGATTAACTAAATCTAGTCGTACAT CTTTAACTATATCAAACGATGTCTATTTCGACTTAGGAAGTCAAAGAGGCTCTGGTGCGAACGCAAATAGAGGGACAATT AACAAAATTATAGGAGTGAGAAAATAA
Upstream 100 bases:
>100_bases GTAATAGTGTTACAGCATCTGCTGAGATACTATTGAAAAATTATGATAGTAAAACAAGTTCAGGGCCATGGACTTTACAC GAAGGGAGAATTATAAGTTA
Downstream 100 bases:
>100_bases TGCAAATATTAGTTAACAAGCGTAATGAGATAATTTCATACGCTATCATTGGCGGCTTTGAAGAAGGTATTGATATTGAA AATTTACCAGAAAATTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFK GILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEA IKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNK VFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFI LLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI NKIIGVRK
Sequences:
>Translated_488_residues MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFK GILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEA IKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNK VFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFI LLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI NKIIGVRK >Mature_487_residues SNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKG ILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAI KNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTS GSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKV FVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFIL LIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTIN KIIGVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54127; Mature: 53996
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARI CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEECCCCEEEE AIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTIT EEECCCEEEEECHHHHCCHHHHEEECCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEEEE FNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLS EEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC DIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVE CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEE YLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAE EEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHH SNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPF CCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHEEEEEEEECCCCCCHHHCCCCC GGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCCCCCHH NKIIGVRK HHHHCCCC >Mature Secondary Structure SNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARI CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEECCCCEEEE AIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTIT EEECCCEEEEECHHHHCCHHHHEEECCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEEEE FNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLS EEEHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC DIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVT EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVE CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEE YLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAE EEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHH SNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPF CCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCHHHEEEEEEEECCCCCCHHHCCCCC GGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTI CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCCCCCHH NKIIGVRK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA