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The map label for this gene is cvfC

Identifier: 161509596

GI number: 161509596

Start: 1467189

End: 1468313

Strand: Reverse

Name: cvfC

Synonym: USA300HOU_1366

Alternate gene names: 161509596

Gene position: 1468313-1467189 (Counterclockwise)

Preceding gene: 161509597

Following gene: 161509595

Centisome position: 51.11

GC content: 34.76

Gene sequence:

>1125_bases
ATGGAAATTTTACGTATAGAGCCAACACCAAGTCCAAATACAATGAAAGTTGTTTTGTCATATACAAGAGAAGACAAGTT
ATCTAATACTTATAAAAAAGTAGAAGAAACACAACCAAGATTTATAAATCAGTTGTTATCTATAGATGGTATCACTTCCA
TTTTTCATGTCATGAACTTCTTAGCTGTTGATAAGGCACCAAAAGCTGATTGGGAAGTCATATTACCTGATATTAAAGCT
GCTTTTTCTGATGCGAATAAGGTTTTAGAATCTGTAAATGAACCTCAAATTGACAATCATTTTGGTGAAATTAAAGCTGA
ATTATTAACTTTTAAGGGTATACCGTATCAAATTAAGCTAACTTCTGCTGACCAAGAATTAAGAGAACAATTACCACAAA
CATATGTTGACCATATGACTCAAGCGCAAACAGCACATGACAATATTGTTTTTATGCGTAAATGGCTAGATTTAGGAAAT
CGCTATGGAAATATTCAAGAAGTAATGGATGGTGTCCTAGAAGAAGTGCTAACTACCTATCCAGAATCACAGTTACCCGT
ATTGGTAAAACATGCTTTAGAAGAAAATCACGCAACTAATAATTATCATTTCTATCGACATGTCTCTTTGGATGAATATC
ATGCAACTGATAATTGGAAGACTCGATTACGAATGTTAAACCATTTTCCAAAGCCGACTTTTGAAGATATACCGCTGCTT
GATTTAGCTTTATCTGATGAAAAAGTACCGGTTAGACGTCAAGCGATTGTATTATTAGGTATGATTGAAAGTAAAGAAAT
TTTACCGTATTTATATAAGGGGCTTCGTGATAAAAGTCCTGTTGTAAGAAGAACAGCAGGGGATTGCATAAGCGATTTAG
GGTATCCAGAGGCACTACCAGAAATGGTGCTACTATTAGATGATCCACAGAAAATCGTTAGGTGGCGTGCTGCTATGTTT
ATCTTTGATGAAGGTAATGCAGAGCAGCTTCCCGCACTAAAAGCCCATATTAATGACAATGCGTTTGAAGTTAAATTACA
AATTGAAATGGCCATATCTCGTATTGAAAACGGAGATGAAGCACTTGGTTCAGTATGGAAACAAATGGCAAACAGAACAA
TTTAA

Upstream 100 bases:

>100_bases
GATAAAGAAAATGACGCAAATTGGGAAACAGTATTGCCAAAAGTAGAGGCTGTATTCGAATAAATTTTTCATCAACTAGT
ATTCGGGGGGAATAAAGTAT

Downstream 100 bases:

>100_bases
TTGGAGGAATTAAATATGAATGCATATGATGCTTATATGAAAGAAATTGCGCAACAAATGCGTGGCGAATTAACTCAAAA
TGGTTTTACAAGTTTAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKA
AFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGN
RYGNIQEVMDGVLEEVLTTYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLL
DLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPVVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMF
IFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI

Sequences:

>Translated_374_residues
MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKA
AFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGN
RYGNIQEVMDGVLEEVLTTYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLL
DLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPVVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMF
IFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI
>Mature_374_residues
MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKA
AFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGN
RYGNIQEVMDGVLEEVLTTYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLL
DLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPVVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMF
IFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI

Specific function: Required for hemolysin production

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CvfC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CVFC_STAA3 (Q2FH09)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_494019.1
- ProteinModelPortal:   Q2FH09
- STRING:   Q2FH09
- EnsemblBacteria:   EBSTAT00000036454
- GeneID:   3913208
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1322
- eggNOG:   COG1413
- GeneTree:   EBGT00050000024607
- HOGENOM:   HBG313586
- OMA:   AMFLYEV
- ProtClustDB:   CLSK873110
- GO:   GO:0009405
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR000357
- InterPro:   IPR014824
- InterPro:   IPR004155
- Gene3D:   G3DSA:1.25.10.10
- Gene3D:   G3DSA:3.30.1370.70
- SMART:   SM00567
- SMART:   SM00932

Pfam domain/function: PF02985 HEAT; PF08712 Nfu_N; SSF48371 ARM-type_fold; SSF110836 NIF_FeS_clus_asmbl_NifU-like_N

EC number: NA

Molecular weight: Translated: 42982; Mature: 42982

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNF
CCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAVDKAPKADWEVILPDIKAAFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKL
HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
TSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGNRYGNIQEVMDGVLEEVLTTY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
PESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLL
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCEE
DLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPVVRRTAGDCISDLGYPEALP
EEEECCCCCCHHHHHHHEEEHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH
EMVLLLDDPQKIVRWRAAMFIFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDE
HHEEEECCHHHHHHHHHHEEEEECCCCHHCCHHHHCCCCCEEEEEEEHHHHHHHHCCCHH
ALGSVWKQMANRTI
HHHHHHHHHHCCCC
>Mature Secondary Structure
MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNF
CCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAVDKAPKADWEVILPDIKAAFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKL
HHHCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
TSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGNRYGNIQEVMDGVLEEVLTTY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
PESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLL
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCEE
DLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPVVRRTAGDCISDLGYPEALP
EEEECCCCCCHHHHHHHEEEHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH
EMVLLLDDPQKIVRWRAAMFIFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDE
HHEEEECCHHHHHHHHHHEEEEECCCCHHCCHHHHCCCCCEEEEEEEHHHHHHHHCCCHH
ALGSVWKQMANRTI
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA