| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is deaD
Identifier: 161486429
GI number: 161486429
Start: 3289294
End: 3291183
Strand: Reverse
Name: deaD
Synonym: S3420
Alternate gene names: 161486429
Gene position: 3291183-3289294 (Counterclockwise)
Preceding gene: 30064503
Following gene: 30064501
Centisome position: 71.56
GC content: 55.87
Gene sequence:
>1890_bases ATGGCTGAATTCGAAACCACTTTTGCAGATCTGGGCCTGAAGGCTCCTATCCTTGAAGCCCTTAACGATCTGGGTTACGA AAAACCATCTCCAATTCAGGCAGAGTGTATTCCACATCTGCTGAATGGCCGCGACGTTCTGGGTATGGCCCAGACGGGGA GCGGAAAAACTGCAGCATTCTCTTTACCTCTGCTGCAGAATCTTGATCCTGAGCTGAAAGCACCACAGATTCTGGTGCTG GCACCGACCCGCGAACTGGCGGTACAGGTTGCTGAAGCAATGACGGATTTCTCTAAACACATGCGCGGCGTAAATGTGGT TGCCCTGTACGGCGGCCAGCGTTATGACGTGCAATTACGCGCCCTGCGTCAGGGGCCGCAGATCGTTGTCGGTACTCCGG GCCGTCTGCTGGACCACCTGAAACGTGGCACTCTGGACCTCTCTAAACTGAGCGGTCTGGTTCTGGATGAAGCTGACGAA ATGCTGCGCATGGGCTTCATCGAAGACGTTGAAACCATTATGGCGCAGATCCCGGAAGGTCATCAGACCGCTCTGTTCTC TGCAACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGTATTCAGTCCAGCG TGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTGTGGGGTATGCGTAAAAACGAAGCACTGGTACGTTTCCTG GAAGCGGAAGATTTTGATGCGGCGATTATCTTCGTTCGTACCAAAAACGCGACTCTGGAAGTGGCTGAAGCTCTTGAGCG TAACGGCTACAATAGCGCCGCGCTGAACGGTGACATGAACCAGGCGCTGCGTGAGCAGACACTGGAACGCCTTAAAGACG GTCGTCTGGACATCCTGATTGCGACCGACGTTGCGGCCCGTGGCCTGGACGTTGAGCGTATCAGCCTGGTGGTTAACTAC GATATCCCGATGGATTCTGAGTCTTACGTTCACCGTATCGGTCGTACCGGTCGTGCGGGTCGTGCTGGCCGCGCGCTGCT GTTCGTTGAGAACCGCGAGCGTCGTCTGCTGCGCAACATTGAACGTACTATGAAGCTGACTATTCCGGAAGTAGAACTGC CGAACGCAGAACTGCTGGGCAAACGCCGTCTGGAAAAATTCGCCGCTAAAGTACAGCAGCAGCTGGAAAGCAGCGATCTG GATCAATACCGCGCACTGCTGAGCAAAATTCAGCCGACTGCAGAAGGTGAAGAGCTGGATCTCGAAACTCTGGCTGCGGC ACTGCTGAAAATGGCACAGGGTGAACGTACTCTGATTGTTCCGCCAGATGCGCCGATGCGTCCGAAACGTGAATTCCGTG ACCGTGATGACCGTGGTCCGCGCGATCGTAACGACCGTGGCCCGCGTGGCGACCGTGAAGATCGTCCGCGTCGTGAACGT CGTGATGTTGGCGATATGCAGCTGTACCGCATTGAAGTGGGCCGCGATGATGGTGTTGAAGTTCGTCATATCGTTGGCGC GATTGCTAACGAAGGCGACATCAGCAGCCGTTACATCGGTAACATCAAGCTGTTTGCTTCTCACTCCACCATCGAACTGC CGAAAGGTATGCCGGGTGAAGTGCTGCAACACTTTACGCGCACTCGCATTCTCAACAAGCCGATGAACATGCAGTTACTG GGCGATGCACAGCCGCATACTGGCGGTGAGCGTCGTGGCGGTGGTCGTGGTTTCGGTGGCGAGCGTCGTGAAGGCGGTCG TAACTTCAGCGGTGAACGCCGTGAAGGTGGTCGTGGTGATGGTCGTCGTTTTAGCGGCGAACGTCGTGAAGGCCGCGCAC CGCGTCGTGATGACTCTACCGGTCGTCGTCGTTTCGGTGGTGATGCGTAA
Upstream 100 bases:
>100_bases CTACTTTGAGCCGGTTCACACTTTTCAATGAAAATTGCTGATCAATTTCATGATGAGTTATGTAGACTGGCCGCCATTAA TTTTGAGGCACACGTACTAC
Downstream 100 bases:
>100_bases TCATCGCTGAACAGCGAACACAATCTGTAAAATAATATATACAGCCCCGATTTTAACCATCGGGGCTTTTTTTCTGTCTT TTGTACTCATGTACTGGTAC
Product: ATP-dependent RNA helicase DeaD
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD [H]
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVL APTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNY DIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDL DQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLL GDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA
Sequences:
>Translated_629_residues MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVL APTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNY DIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDL DQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLL GDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA >Mature_628_residues AEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLA PTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEM LRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLE AEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYD IPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLD QYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERR DVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLG DAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA
Specific function: Has a helix-destabilizing activity. Plays a key role in optimal cell growth at low temperature and is required for normal cell division [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=390, Percent_Identity=38.2051282051282, Blast_Score=270, Evalue=4e-72, Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=40.5994550408719, Blast_Score=268, Evalue=2e-71, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=39.8416886543536, Blast_Score=262, Evalue=9e-70, Organism=Homo sapiens, GI31542656, Length=440, Percent_Identity=36.8181818181818, Blast_Score=256, Evalue=7e-68, Organism=Homo sapiens, GI224593278, Length=415, Percent_Identity=37.1084337349398, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI13129006, Length=400, Percent_Identity=37.75, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI50659095, Length=429, Percent_Identity=35.1981351981352, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI148613856, Length=368, Percent_Identity=37.7717391304348, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI38201710, Length=368, Percent_Identity=37.7717391304348, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI4758112, Length=368, Percent_Identity=35.5978260869565, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI18375623, Length=368, Percent_Identity=35.5978260869565, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI21040371, Length=368, Percent_Identity=35.5978260869565, Blast_Score=243, Evalue=5e-64, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=37.027027027027, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI83700235, Length=382, Percent_Identity=38.2198952879581, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=38.1766381766382, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI45446747, Length=372, Percent_Identity=37.0967741935484, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI45446743, Length=372, Percent_Identity=37.0967741935484, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI164664518, Length=357, Percent_Identity=33.8935574229692, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI4503529, Length=382, Percent_Identity=37.434554973822, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI222352149, Length=384, Percent_Identity=36.9791666666667, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=37.9310344827586, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=37.9310344827586, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=37.9310344827586, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=37.9310344827586, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI87196351, Length=377, Percent_Identity=37.9310344827586, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=37.3297002724796, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI51094101, Length=346, Percent_Identity=35.2601156069364, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI164419743, Length=346, Percent_Identity=35.2601156069364, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.7094972067039, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.7094972067039, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.7094972067039, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=37.7094972067039, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=36.1643835616438, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=34.3575418994413, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=34.5505617977528, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=31.5642458100559, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=32.8767123287671, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=32.6027397260274, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI41327779, Length=455, Percent_Identity=32.5274725274725, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=33.0459770114943, Blast_Score=193, Evalue=5e-49, Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=33.7874659400545, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=31.3131313131313, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=399, Percent_Identity=31.8295739348371, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=33.1288343558282, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI38569505, Length=393, Percent_Identity=30.7888040712468, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI38569503, Length=393, Percent_Identity=30.7888040712468, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI38327634, Length=452, Percent_Identity=30.5309734513274, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI256773275, Length=383, Percent_Identity=32.8981723237598, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=30.4347826086957, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI9966805, Length=384, Percent_Identity=28.3854166666667, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI17505907, Length=214, Percent_Identity=35.5140186915888, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=35.5140186915888, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI154759257, Length=402, Percent_Identity=28.3582089552239, Blast_Score=119, Evalue=8e-27, Organism=Escherichia coli, GI87082221, Length=629, Percent_Identity=100, Blast_Score=1261, Evalue=0.0, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=41.1140583554377, Blast_Score=291, Evalue=1e-79, Organism=Escherichia coli, GI1787605, Length=349, Percent_Identity=43.5530085959885, Blast_Score=279, Evalue=4e-76, Organism=Escherichia coli, GI1788930, Length=391, Percent_Identity=40.920716112532, Blast_Score=248, Evalue=1e-66, Organism=Escherichia coli, GI1790214, Length=377, Percent_Identity=37.9310344827586, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI48994977, Length=373, Percent_Identity=25.7372654155496, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17555296, Length=378, Percent_Identity=38.6243386243386, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=38.4615384615385, Blast_Score=268, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71995724, Length=377, Percent_Identity=37.9310344827586, Blast_Score=266, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17507121, Length=377, Percent_Identity=37.6657824933687, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=38.4615384615385, Blast_Score=251, Evalue=8e-67, Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=39.7849462365591, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71995514, Length=387, Percent_Identity=39.5348837209302, Blast_Score=249, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510307, Length=387, Percent_Identity=39.5348837209302, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510309, Length=387, Percent_Identity=39.5348837209302, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=39.6600566572238, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=36.6847826086957, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17537549, Length=409, Percent_Identity=38.3863080684597, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17510559, Length=404, Percent_Identity=35.3960396039604, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI71995718, Length=394, Percent_Identity=37.3096446700508, Blast_Score=232, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17552642, Length=388, Percent_Identity=35.8247422680412, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=31.5789473684211, Blast_Score=219, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17509811, Length=436, Percent_Identity=34.8623853211009, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI115532548, Length=367, Percent_Identity=34.3324250681199, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI115532546, Length=367, Percent_Identity=34.3324250681199, Blast_Score=208, Evalue=9e-54, Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=31.4606741573034, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=31.4606741573034, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=33.2460732984293, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=33.5078534031414, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507945, Length=375, Percent_Identity=34.6666666666667, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=32.8530259365994, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=33.4231805929919, Blast_Score=188, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17507879, Length=386, Percent_Identity=32.3834196891192, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193208216, Length=416, Percent_Identity=30.2884615384615, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=31.5363881401617, Blast_Score=175, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17505370, Length=475, Percent_Identity=29.6842105263158, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=29.8200514138817, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=30.5785123966942, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=28.4653465346535, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=32.2946175637394, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17556951, Length=372, Percent_Identity=27.6881720430108, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=40.5797101449275, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17507641, Length=403, Percent_Identity=28.0397022332506, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32564046, Length=394, Percent_Identity=27.6649746192893, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148291, Length=374, Percent_Identity=27.2727272727273, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71997889, Length=412, Percent_Identity=25.2427184466019, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=25.2906976744186, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71987152, Length=115, Percent_Identity=41.7391304347826, Blast_Score=101, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=40.1084010840108, Blast_Score=263, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=38.563829787234, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6320224, Length=380, Percent_Identity=36.3157894736842, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=40.2234636871508, Blast_Score=248, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=35.195530726257, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=383, Percent_Identity=37.0757180156658, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6322912, Length=374, Percent_Identity=38.2352941176471, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6322323, Length=374, Percent_Identity=38.2352941176471, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=389, Percent_Identity=35.73264781491, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=463, Percent_Identity=31.9654427645788, Blast_Score=227, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320119, Length=371, Percent_Identity=35.3099730458221, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6324620, Length=360, Percent_Identity=34.4444444444444, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=369, Percent_Identity=36.0433604336043, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=439, Percent_Identity=31.6628701594533, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=34.3163538873995, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=375, Percent_Identity=31.4666666666667, Blast_Score=190, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=33.0729166666667, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=32.5966850828729, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=382, Percent_Identity=33.2460732984293, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=398, Percent_Identity=29.1457286432161, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=427, Percent_Identity=26.2295081967213, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=30.0947867298578, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=211, Percent_Identity=37.4407582938389, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=423, Percent_Identity=26.7139479905437, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=366, Percent_Identity=25.4098360655738, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=24.7641509433962, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI24645031, Length=390, Percent_Identity=38.2051282051282, Blast_Score=265, Evalue=1e-70, Organism=Drosophila melanogaster, GI24585582, Length=408, Percent_Identity=37.7450980392157, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=40.7821229050279, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24662330, Length=371, Percent_Identity=39.622641509434, Blast_Score=251, Evalue=2e-66, Organism=Drosophila melanogaster, GI24584994, Length=429, Percent_Identity=35.8974358974359, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=40.2203856749311, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=38.9830508474576, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24642151, Length=377, Percent_Identity=37.4005305039788, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=36.3143631436314, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=36.3143631436314, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=36.3143631436314, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI24582080, Length=381, Percent_Identity=36.745406824147, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI24582078, Length=381, Percent_Identity=36.745406824147, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI17136248, Length=381, Percent_Identity=36.745406824147, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI24582075, Length=381, Percent_Identity=36.745406824147, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI21356161, Length=424, Percent_Identity=34.6698113207547, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=36.5921787709497, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=37.2703412073491, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24583281, Length=357, Percent_Identity=32.4929971988796, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24583279, Length=357, Percent_Identity=32.4929971988796, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=36.7231638418079, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI17136814, Length=409, Percent_Identity=35.6968215158924, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17977678, Length=374, Percent_Identity=34.2245989304813, Blast_Score=209, Evalue=5e-54, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=32.8530259365994, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=38.9240506329114, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571808, Length=396, Percent_Identity=31.5656565656566, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571809, Length=396, Percent_Identity=31.5656565656566, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI21355559, Length=447, Percent_Identity=32.4384787472036, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24643725, Length=399, Percent_Identity=30.3258145363409, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=29.8153034300792, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI24642822, Length=441, Percent_Identity=29.9319727891156, Blast_Score=162, Evalue=8e-40, Organism=Drosophila melanogaster, GI24666101, Length=450, Percent_Identity=29.3333333333333, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI20130173, Length=390, Percent_Identity=31.2820512820513, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=31.1178247734139, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI19920478, Length=400, Percent_Identity=29.25, Blast_Score=141, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=24.1050119331742, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24640164, Length=384, Percent_Identity=24.21875, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=33.9366515837104, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=33.9366515837104, Blast_Score=112, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021046 - InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF12343 DEADboxA; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 70547; Mature: 70416
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF CCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEE SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR ECHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEHH ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HHHCCCEEEEECCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL CCEEEEHHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCCCCCEEEECCCCCHHHHHHH EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI HCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI EECHHHCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHH ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEECCEEEEECCCEEECCCCCCHH VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRRFSGERREGRAPRRDDSTGRRRFGGDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF CCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEE SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR ECHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEHH ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HHHCCCEEEEECCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL CCEEEEHHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCCCCCEEEECCCCCHHHHHHH EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI HCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI EECHHHCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHH ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEECCEEEEECCCEEECCCCCCHH VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRRFSGERREGRAPRRDDSTGRRRFGGDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8056751 [H]