Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is fxsA
Identifier: 161486371
GI number: 161486371
Start: 4464477
End: 4464953
Strand: Direct
Name: fxsA
Synonym: S4561
Alternate gene names: 161486371
Gene position: 4464477-4464953 (Clockwise)
Preceding gene: 30065509
Following gene: 30065517
Centisome position: 97.07
GC content: 47.38
Gene sequence:
>477_bases TTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATT GGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGA ATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCTGCGGCGGAGATGATTAAAAGTGTTTCGCTGATTATT GCCGGTTTGCTGCTTTTATTACCGGGCTTTTTCACCGACTTCCTCGGTCTTCTGCTTTTATTGCCGCCGGTGCAAAAGCA TCTGACAGTGAAGTTGATGCCACATTTGCGCTTTTCTCGCATGCCAGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTA ATACTTTTGATGGTGAGTATCAGCGAAAGGATGATGACCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAA
Upstream 100 bases:
>100_bases ACATCTTGAAATTTTGCTAATGACCACAATATAAGCTGAAGGCGATTCGCAACCCATTCAGGTAGCCGGGTTTAACCGGC TGCTATTACAGGAGAAACCT
Downstream 100 bases:
>100_bases TGTCGAAACGCCGGATTATGTGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGAAACAGCCATAACCCCACCAGCA TGATCAGCGCATAGAGACTT
Product: FxsA
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7 [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD
Sequences:
>Translated_158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD >Mature_158_residues MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLII AGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD
Specific function: Overexpression alleviates the exclusion of phage T7 in cells harboring the F plasmid [H]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
Organism=Escherichia coli, GI87082376, Length=158, Percent_Identity=99.3670886075949, Blast_Score=316, Evalue=4e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 17678; Mature: 17678
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC MPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10497016; 7610040; 9278503; 3541901; 7984428; 10497017 [H]