Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is flgA
Identifier: 161484755
GI number: 161484755
Start: 3841012
End: 3841725
Strand: Direct
Name: flgA
Synonym: y3457
Alternate gene names: NA
Gene position: 3841012-3841725 (Clockwise)
Preceding gene: 22127329
Following gene: 22127333
Centisome position: 83.49
GC content: 51.26
Gene sequence:
>714_bases TTGATCTGTGGCGCATTGCTGTGTGCCAACACCATTTCAGCGGCTGAAAACAACACCAGAAAACAGGTTTATACGCAGGC TCTGCACGCCGCGACGGCCGATATCGCCCAAACCGCCAAGAATAAAAATTGGCAGGGCTATAGCGTCAAAATGAATATTT TTATTCCGGCAGAAATCAGCCGTTATAAGCCGTGCCAAAAAGCACTTCAGGTCGCATTGCCAACCGCAGAAACACAACAT TTATCGCGTTTGCGTTATGAGATAAGTTGTCCCGATGGTCAGGGCTGGGAAGTGGTCGCCACGGTAAAGCCGGATATTTA TCTGCCAATATGGGTGGCAAAACAGACCCTTGAGCGCGGGAGAAAAGTGCAGGCGGATGACATCGAATTGAAGAAGAAGA ATATTACCGGTGTTCAGGGCGGCTATATCACCGATCCAGACGAAATCCTCGGTTTAACCATCAAGCGCCGTATTCGCCAG TTGCAAGCCGTTATCCCCTCGCAATTAGAACAGCCCGTTTTAGTGACCCGTAATCAGCACGTTCTGATGCTGGCCGCGCA AGACGGTATCGAGGCCCAAATGTTAGGGATAGCACAAAAAAATGGCCGCAAAGGGGAGCTTATCAAGGTAAAAAACCTCA GCAGTGGCCGAGTGGTGACCGCCACGGTTGATGGCAGCGGGCGGGTCAGAATGCTAGGGCTGTCCACGCCCTAG
Upstream 100 bases:
>100_bases TAATAGTATTTTTTATTTTTATTGCTCGCCAAAATGGAAAGTTAACTTCCGCCTGTCGGTGACATTTAGTATCCGCGTCC GTCACTGCCTACAAAGCCTG
Downstream 100 bases:
>100_bases GGGTGACTTAATCATCAAGTTACGTTTCAGGCGGCCAGCTAAGTTTGAGACAGTAAGCTAAGTTTGAGGCAGTAAGTTAA GTTAGAGGTAATAAGTTAAG
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagella Basal Body P-Ring Formation Protein FlgA; SAF Domain-Containing Protein; Flageller Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal-Body P-Ring Formation Protein FlgA; Lateral Flagellar P-Ring Addition Protein; Flagellar Basal Body P-Ring Formation Protein FlgA; SAF Domain Protein
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MICGALLCANTISAAENNTRKQVYTQALHAATADIAQTAKNKNWQGYSVKMNIFIPAEISRYKPCQKALQVALPTAETQH LSRLRYEISCPDGQGWEVVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRMLGLSTP
Sequences:
>Translated_237_residues MICGALLCANTISAAENNTRKQVYTQALHAATADIAQTAKNKNWQGYSVKMNIFIPAEISRYKPCQKALQVALPTAETQH LSRLRYEISCPDGQGWEVVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRMLGLSTP >Mature_237_residues MICGALLCANTISAAENNTRKQVYTQALHAATADIAQTAKNKNWQGYSVKMNIFIPAEISRYKPCQKALQVALPTAETQH LSRLRYEISCPDGQGWEVVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRMLGLSTP
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26069; Mature: 26069
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICGALLCANTISAAENNTRKQVYTQALHAATADIAQTAKNKNWQGYSVKMNIFIPAEIS CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC RYKPCQKALQVALPTAETQHLSRLRYEISCPDGQGWEVVATVKPDIYLPIWVAKQTLERG CCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEEEEECCCEEEEHHHHHHHHHCC RKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQLQAVIPSQLEQPVLVTRNQH CCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCE VLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRMLGLSTP EEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC >Mature Secondary Structure MICGALLCANTISAAENNTRKQVYTQALHAATADIAQTAKNKNWQGYSVKMNIFIPAEIS CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC RYKPCQKALQVALPTAETQHLSRLRYEISCPDGQGWEVVATVKPDIYLPIWVAKQTLERG CCCHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCEEEEEECCCEEEEHHHHHHHHHCC RKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQLQAVIPSQLEQPVLVTRNQH CCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCE VLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRMLGLSTP EEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA