| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is thrB [H]
Identifier: 161484741
GI number: 161484741
Start: 4131817
End: 4132746
Strand: Reverse
Name: thrB [H]
Synonym: y3716
Alternate gene names: 161484741
Gene position: 4132746-4131817 (Counterclockwise)
Preceding gene: 229013121
Following gene: 22127589
Centisome position: 89.83
GC content: 52.58
Gene sequence:
>930_bases ATGGTTAAAATCTATGCTCCGGCATCAATTGGCAATGTCAGCGTCGGCTTCGATGTATTAGGTGCGGCGGTCTCGCCAAT AGATGGCACATTGCTCGGTGATTGTGTCAGCGTAACAGCCGCAGAGCGTTTTAGCCTGCATAATGAAGGCCGTTTTGTCA GCAAGCTGCCTGATGATCCCAAACAGAATATCGTTTATCAGTGTTGGGAACGCTTTTGCCAGGAAATGGGCAAAGAGATC CCCGTCGCTATGGTGCTGGAAAAGAATATGCCGATCGGTTCAGGGCTGGGTTCCAGCGCCTGTTCAGTGGTTGCCGGCCT GATGGCGATGAATGAGTTCTGCGGCCAACCGTTGGATAAAGTCACATTACTCGGCATGATGGGGGAACTGGAAGGGCGGG TCTCGGGCAGTATTCATTTCGATAATGTCGCGCCTTGTTATTTAGGGGGCATGCAGCTGATCCTTGAGCAGGAAGGTTAT ATCAGTCAGGATGTTCCTGGTTTTAGCGATTGGTTATGGGTGATGGCCTATCCGGGGATCAAAGTGTCTACCGCCGAAGC GCGGGCGATTTTACCGGCGCAGTATCGCCGTCAGGATTGCATCACTCATGGGCGTAATTTGGCGGGGTTCATTCACGCTT GTCACACTCAGCAGCCAGATTTAGCCGCTAAAATGATGAAGGATGTTATCGCGGAACCTTACCGCACTCAATTGCTGCCA GGCTTTGCTGCTGCACGACAAGCGGCACAGGATATCGGTGCGCTGGCCTGTGGTATTTCCGGATCCGGCCCCACGTTGTT TGCCGTCTGTAACGACCAGGCAACCGCACAACGCATGGCGGGCTGGCTACAAAATCATTACCTGCAAAACGACGAAGGTT TTGTTCATATTTGCCGTCTGGATACCGCAGGCGCACGACTACTGGGATAA
Upstream 100 bases:
>100_bases CGTTGGTGCTACGCGGTTATGGCGCAGGCAATGATGTGACTGCCGCTGGGGTGTTTGCCGATCTTTTACGCACATTATCA TGGAAGTTGGGAGTTTAAAT
Downstream 100 bases:
>100_bases CGCATGAAACTGTATAACCTTAAAGATCATAACGAGCAGGTCAGCTTCGCACAGGCGATCAAACAAGGCTTGGGCAAACA GCAGGGGCTATTTTTCCCGT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEI PVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGY ISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLP GFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRLDTAGARLLG
Sequences:
>Translated_309_residues MVKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEI PVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGY ISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLP GFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRLDTAGARLLG >Mature_309_residues MVKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEI PVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGY ISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLP GFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRLDTAGARLLG
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=308, Percent_Identity=76.6233766233766, Blast_Score=508, Evalue=1e-145,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 33232; Mature: 33232
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDP CEEEEECCCCCCCEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCH KQNIVYQCWERFCQEMGKEIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDK HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH VTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGYISQDVPGFSDWLWVMAYPGI HHHHHHHHHHCCCCCCCEEECCCCHHHHCCHHHEEECCCCCCCCCCCHHHHHHHEECCCE KVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLP EEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCC GFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRL CHHHHHHHHHHHHHEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEE DTAGARLLG CCCCHHCCC >Mature Secondary Structure MVKIYAPASIGNVSVGFDVLGAAVSPIDGTLLGDCVSVTAAERFSLHNEGRFVSKLPDDP CEEEEECCCCCCCEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCH KQNIVYQCWERFCQEMGKEIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDK HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH VTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGYISQDVPGFSDWLWVMAYPGI HHHHHHHHHHCCCCCCCEEECCCCHHHHCCHHHEEECCCCCCCCCCCHHHHHHHEECCCE KVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAAKMMKDVIAEPYRTQLLP EEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCC GFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHYLQNDEGFVHICRL CHHHHHHHHHHHHHEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEE DTAGARLLG CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA