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The map label for this gene is thf1 [H]

Identifier: 161407965

GI number: 161407965

Start: 689803

End: 690456

Strand: Reverse

Name: thf1 [H]

Synonym: P9301_08011

Alternate gene names: 161407965

Gene position: 690456-689803 (Counterclockwise)

Preceding gene: 126696141

Following gene: 126696137

Centisome position: 42.05

GC content: 28.29

Gene sequence:

>654_bases
TTGAGTCAACATACGCTAACCTTATTAAGGTTTACATATAAAAAATTGAAAGAAAAATTGACTGTTTCAGATAGCAAAAG
GTTATTCCATGAAAAATTCCCTTACGTCATTCCAGGTTTATATAAAAGAATAGTTGATGAAATACTTGTCGAACTTAATC
TTCTAAACCATCAAAATGAATTTACGCAAGAGTATCTCTTTTGTATCGGTCTCACCGAAACATTCAAAGAATTAATGAAA
GGATATCAACCAAATAAACACTTGGATCTACTTTTTGAATCTTTATGCAGTTCTACAAATTTTGAAGCGAAGGAAATTAA
TGAAATATCTCAGAAATCTCAAAAGGAATTCAAAAATAAAACATCTAATGATATTTTGAAATTGTTAATAGAAAAAAGCA
ATTCTAAACTTTATCCCTCAAGGATTTTGAACTTAGCTATATATATATTAATTTCAAGCGCCCAAGATCTCAAAGAGAAA
GAAGAGTCAGGGAGAAATAAGATCATTTCTGACATCTTTGAAAAATTAAACTTATCGGCTAATAAAGCAGAGAAAGATAT
CGGAATTTATAAAAGCAGCATATCAAAAATGGAACAAGCAAAAGAATTAATTGAAGAACTCAAGACTAAAGATAAGAAAA
AAGAACAAAAATAA

Upstream 100 bases:

>100_bases
AGTCTCGAATAAATATCAAAGACTCTTTCGCTTCCGCCAGATTCTTCTAATACTAAAGGGATCATAATAATATTTATTTG
TTTATTAGATATTAACGATA

Downstream 100 bases:

>100_bases
TAATACTTATTTTTTTAATCTTTTTTTATCTTTCCAAGAGACATAGGATATATAAATTACAGCGAAAGTTATAAATATGA
GTAAAACGAACGATGTTAGG

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSQHTLTLLRFTYKKLKEKLTVSDSKRLFHEKFPYVIPGLYKRIVDEILVELNLLNHQNEFTQEYLFCIGLTETFKELMK
GYQPNKHLDLLFESLCSSTNFEAKEINEISQKSQKEFKNKTSNDILKLLIEKSNSKLYPSRILNLAIYILISSAQDLKEK
EESGRNKIISDIFEKLNLSANKAEKDIGIYKSSISKMEQAKELIEELKTKDKKKEQK

Sequences:

>Translated_217_residues
MSQHTLTLLRFTYKKLKEKLTVSDSKRLFHEKFPYVIPGLYKRIVDEILVELNLLNHQNEFTQEYLFCIGLTETFKELMK
GYQPNKHLDLLFESLCSSTNFEAKEINEISQKSQKEFKNKTSNDILKLLIEKSNSKLYPSRILNLAIYILISSAQDLKEK
EESGRNKIISDIFEKLNLSANKAEKDIGIYKSSISKMEQAKELIEELKTKDKKKEQK
>Mature_216_residues
SQHTLTLLRFTYKKLKEKLTVSDSKRLFHEKFPYVIPGLYKRIVDEILVELNLLNHQNEFTQEYLFCIGLTETFKELMKG
YQPNKHLDLLFESLCSSTNFEAKEINEISQKSQKEFKNKTSNDILKLLIEKSNSKLYPSRILNLAIYILISSAQDLKEKE
ESGRNKIISDIFEKLNLSANKAEKDIGIYKSSISKMEQAKELIEELKTKDKKKEQK

Specific function: May be involved in photosynthetic membrane biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017499 [H]

Pfam domain/function: PF11264 ThylakoidFormat [H]

EC number: NA

Molecular weight: Translated: 25405; Mature: 25274

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHTLTLLRFTYKKLKEKLTVSDSKRLFHEKFPYVIPGLYKRIVDEILVELNLLNHQNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
FTQEYLFCIGLTETFKELMKGYQPNKHLDLLFESLCSSTNFEAKEINEISQKSQKEFKNK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TSNDILKLLIEKSNSKLYPSRILNLAIYILISSAQDLKEKEESGRNKIISDIFEKLNLSA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NKAEKDIGIYKSSISKMEQAKELIEELKTKDKKKEQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQHTLTLLRFTYKKLKEKLTVSDSKRLFHEKFPYVIPGLYKRIVDEILVELNLLNHQNE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
FTQEYLFCIGLTETFKELMKGYQPNKHLDLLFESLCSSTNFEAKEINEISQKSQKEFKNK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
TSNDILKLLIEKSNSKLYPSRILNLAIYILISSAQDLKEKEESGRNKIISDIFEKLNLSA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NKAEKDIGIYKSSISKMEQAKELIEELKTKDKKKEQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA