Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is imuA [H]
Identifier: 16119905
GI number: 16119905
Start: 109282
End: 110034
Strand: Direct
Name: imuA [H]
Synonym: Atu6091
Alternate gene names: 16119905
Gene position: 109282-110034 (Clockwise)
Preceding gene: 16119903
Following gene: 16119906
Centisome position: 51.01
GC content: 62.68
Gene sequence:
>753_bases ATGACTGCTGCCCGCGAAAGGGTAATCTGCGATCTGCGGGAGCGTATTGCATCGCTCGAAACCAGCACGGCGAAAAAAGC CGGTTGGTTGCCATTTGGCGTGCCGGAGATGGATGCGGTTCTGCCTGGCGGCGGCCTTGCTCATGGCGCGCTTCACGAAT TTGCCGGTGGTGGATCGGGCACCGTCGATGGTGCGGCCGCTGCTCTTTTTGCAGCCGGCATAGCGGCACGGACGAAGGGG CCGATCGTGTGGTGTCTGACGCGACCAGATCTGTTTTTCCCCGCGCTTGCGCAGGTCGGACTGCATCACGACCGGATAAT CTTCGTCGAGTCCGACAAGGAGGAAGACGTGCTCGCCAACATGGAGGAGGGGCTGTCCTTTGGTGGGCTCGGCGCCGTCG TCGGTGAACTCGTTCGCCTGCCGATGGTCAGCTCGCGCCGCCTGCAGCTGGCGGCCGAGCGCACGGGGACAATGGCATTG GCTGTGCGTCGTTGGAGGCGGCAGACAGAGGCCAATGATTTCGGGCAGCCGACGGCGTCGACCACGCGGTGGCGGGTGAG CGTGATGCCATCGGAGGATTTGCCAGTGCCGGGTGTGGGGAGGGCCCAATGGTTGCTGGAATTGATGCGCGTGAAAGCGG GTGAATGTGCTGAGTTTCTCGTGAGGGCGTGCGATGACAAGGGTTGTCTCGATCTATCTTCCGGATCTGCCGACGGATCG CATTCGTCGCGCCGATCCATCCATTCCGCCTGA
Upstream 100 bases:
>100_bases CGCCTTGACTCCTTTCTCATATGGGAACAAAAACAGAACATTGACATTTGCACGACATGAAGTCGCCCTGCCAACACGAC CTTGAAGGGAGCCGTGAACA
Downstream 100 bases:
>100_bases ACAGGCGATCGCGGTGATCGCCAGGAGCGGCTCGAAACGCTGGGTATCGGCGGCCGACGCAGCCGCCAGACAAGCCGGCG TTCATGTCGGCATGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTAARERVICDLRERIASLETSTAKKAGWLPFGVPEMDAVLPGGGLAHGALHEFAGGGSGTVDGAAAALFAAGIAARTKG PIVWCLTRPDLFFPALAQVGLHHDRIIFVESDKEEDVLANMEEGLSFGGLGAVVGELVRLPMVSSRRLQLAAERTGTMAL AVRRWRRQTEANDFGQPTASTTRWRVSVMPSEDLPVPGVGRAQWLLELMRVKAGECAEFLVRACDDKGCLDLSSGSADGS HSSRRSIHSA
Sequences:
>Translated_250_residues MTAARERVICDLRERIASLETSTAKKAGWLPFGVPEMDAVLPGGGLAHGALHEFAGGGSGTVDGAAAALFAAGIAARTKG PIVWCLTRPDLFFPALAQVGLHHDRIIFVESDKEEDVLANMEEGLSFGGLGAVVGELVRLPMVSSRRLQLAAERTGTMAL AVRRWRRQTEANDFGQPTASTTRWRVSVMPSEDLPVPGVGRAQWLLELMRVKAGECAEFLVRACDDKGCLDLSSGSADGS HSSRRSIHSA >Mature_249_residues TAARERVICDLRERIASLETSTAKKAGWLPFGVPEMDAVLPGGGLAHGALHEFAGGGSGTVDGAAAALFAAGIAARTKGP IVWCLTRPDLFFPALAQVGLHHDRIIFVESDKEEDVLANMEEGLSFGGLGAVVGELVRLPMVSSRRLQLAAERTGTMALA VRRWRRQTEANDFGQPTASTTRWRVSVMPSEDLPVPGVGRAQWLLELMRVKAGECAEFLVRACDDKGCLDLSSGSADGSH SSRRSIHSA
Specific function: Along with dnaE2 and imuB is required for the error- prone processing of DNA lesions [H]
COG id: COG4544
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017026 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26649; Mature: 26518
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARERVICDLRERIASLETSTAKKAGWLPFGVPEMDAVLPGGGLAHGALHEFAGGGSG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC TVDGAAAALFAAGIAARTKGPIVWCLTRPDLFFPALAQVGLHHDRIIFVESDKEEDVLAN CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHH MEEGLSFGGLGAVVGELVRLPMVSSRRLQLAAERTGTMALAVRRWRRQTEANDFGQPTAS HHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC TTRWRVSVMPSEDLPVPGVGRAQWLLELMRVKAGECAEFLVRACDDKGCLDLSSGSADGS CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCC HSSRRSIHSA CHHHHHHCCC >Mature Secondary Structure TAARERVICDLRERIASLETSTAKKAGWLPFGVPEMDAVLPGGGLAHGALHEFAGGGSG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC TVDGAAAALFAAGIAARTKGPIVWCLTRPDLFFPALAQVGLHHDRIIFVESDKEEDVLAN CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHH MEEGLSFGGLGAVVGELVRLPMVSSRRLQLAAERTGTMALAVRRWRRQTEANDFGQPTAS HHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC TTRWRVSVMPSEDLPVPGVGRAQWLLELMRVKAGECAEFLVRACDDKGCLDLSSGSADGS CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCC HSSRRSIHSA CHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA