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The map label for this gene is nrtB [H]

Identifier: 16119900

GI number: 16119900

Start: 104051

End: 104851

Strand: Direct

Name: nrtB [H]

Synonym: Atu6086

Alternate gene names: 16119900

Gene position: 104051-104851 (Clockwise)

Preceding gene: 159161970

Following gene: 159161971

Centisome position: 48.57

GC content: 59.55

Gene sequence:

>801_bases
ATGATCACGACCAGCGCGAAGACTCCAACCACAGCAGGACGGTATCTGGCCCAGGCGTTTGCTCCGTGGGCGTTTCCTGT
AATCGTCGTCATTCTCTGGCAGATCGCCTCATCGGGAGGACTGCTCTCCCAAGGCATTCTTCCGTCGCCGCTCGCCGTCC
TGGAGGCCGCCTGGTCTCTGGCGGCAAGCGGCGAGCTTGTGCAGCACATGGCAGCCAGCTTTTGGCGCGCGGCCGTCGGC
TTCGGTATAGGTTCGGCTCTGGGGCTGTTCTTCGGTTTTGTGAACGGCCTGTGGCGAACCGGGGAAACGCTCTTCGACAG
TTCGCTTCAGATGCTCCGTAACATTCCGTCGCTCGCCATGGTGCCACTCGTCATCATGTGGTTCGGAATCGGCGAGGAAG
CCAAGATTTTCCTCGTGGCGTTCGCTACCATGTTTCCGATCTACCTCAACACCTTCCACGGCATCAAATCAGTCGATCAG
GGTCTGATCGAGATGGGGCGGAACTACGGACTGACACGAACCGGTCTTGTGCGCGATGTCATCTTGCCTGGAGCCATGTC
GTCTATTCTCGTTGGTGTGCGGTACGCGCTCGGGGTGGCCTGGATCGTGCTGATCGTGGCCGAGACGATCGCGGCGAGTT
CCGGTATCGGCCTTCTCGCTACCAACGCGCGTGAATTCCTTCAGTCCGATGTCGTGGTGCTCTCGATCATCCTGTACGCG
CTTCTTGGCAAGCTGACAGACTGGCTGGCGCGGCTCGCGGAGAACCGTTGGCTACGCTGGCATCCATCCTATCAGAAGTA
A

Upstream 100 bases:

>100_bases
TTATGGAGCCGGGATCATCGACAAGAAGCTGAAAGCCAGCGACCTGCTGGATGACTCCTTCTCTCCCAAGCAGACAGACT
GACGAACGCAGAGGCTGACG

Downstream 100 bases:

>100_bases
GAGAGGTCTCTGGTGACTGTAGTCTCCTTGAAATCGACGCGGCCGAACGTGGCAAAAGAGGTTTCGTTAAGCAACACCTC
CGCGGGCGGAGCCGCGCTGG

Product: ABC transporter, membrane spanning protein (nitrate/sulfonate)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MITTSAKTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVG
FGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIGEEAKIFLVAFATMFPIYLNTFHGIKSVDQ
GLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIVLIVAETIAASSGIGLLATNAREFLQSDVVVLSIILYA
LLGKLTDWLARLAENRWLRWHPSYQK

Sequences:

>Translated_266_residues
MITTSAKTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVG
FGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIGEEAKIFLVAFATMFPIYLNTFHGIKSVDQ
GLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIVLIVAETIAASSGIGLLATNAREFLQSDVVVLSIILYA
LLGKLTDWLARLAENRWLRWHPSYQK
>Mature_266_residues
MITTSAKTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVG
FGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIGEEAKIFLVAFATMFPIYLNTFHGIKSVDQ
GLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIVLIVAETIAASSGIGLLATNAREFLQSDVVVLSIILYA
LLGKLTDWLARLAENRWLRWHPSYQK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=63.6734693877551, Blast_Score=290, Evalue=9e-80,
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=34.9794238683128, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28817; Mature: 28817

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]