| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902744
Identifier: 160902744
GI number: 160902744
Start: 1380204
End: 1381493
Strand: Direct
Name: 160902744
Synonym: Pmob_1290
Alternate gene names: NA
Gene position: 1380204-1381493 (Clockwise)
Preceding gene: 160902743
Following gene: 160902745
Centisome position: 63.62
GC content: 32.4
Gene sequence:
>1290_bases ATGAGCAACAAAATTATAGCACAAATACTGGGTATTGACAAAGGTTTTAAGTTAAAAGAGAGAAAAGATTTGAGAAAAGA TGGAGAGATTTATTTTGAAGTGAGATATTCGAAAAAGGTAGGGATACCAGAATGTCCGTATAAATGTAAAGGATGTAAAG ACAAGCGAGAATACATAGTACGTAACGGTAAAGCAAAAGAAAGGATTATCAAAGCCGGAAAAGTTGGGACACAAAGAATA TATCTGATACATAGACCACAAAGATACATGTGTAAAAAAACAGGGAAAAGCTTCAGAAATGAGAAGATAAGTTATAGATG GCAAAGAATAACAAGAGCAGAGACAGAAAACCTTGTAAAGAATTTGCGTAAGATGAGCATATCGGCAATCGCGAAAGAGC ACGGTGTAAGTGTGAGAACTGTGAGTAATTTATTAGATTCGATTGAAGTAAAGGTAGATTGGACGAAATTTCAAGATATG AAAGATATAAAGTTAGGGATAGATGAACACTCATTTAGAGGGTTTAAGATGGTGACGACGATAGTAGAATTGAACACATC AAACACGATAGCGATATTAAAATCAGACAAAAAAGAAGAGTTGAAAGGATTTTTAAATAAAATACCGTATAAAATAAAAC AAAAGATAACAGAAGCGGCTATCGATATGAGAACCTCTTTTAAGAATGCAGTCAAAGAAGAATTACTTGGAGTGAAAGTA GTAGCGGACCATTTTCATGTAGTAAAAGACGCACAGAAAAAGCTAAGAGAAAGTATAAAGATAGAAGAAGAAGTAACGAA TAACAATAAAAAGATACCTGTAAAATTGTTCTTTTTGAATGGAAAGAAATTATTAAAAGAGAAGAAAAAGGTAAAGAAAT TATACAAAACATTGAAGGAACATCCATATCTAAAAGAGTATTATAGATACCTACTAATGTTGAAATGGATGTATAAAGCA GAAACGTATGAAGAAGGGAAAAGAAGATTACACATATTGATAGGGAAGATGGAAGAAAGTGAAGATCCTCAGGTATGGAG ATGGGCCAAAACATATATAAGGTGGGAAAAAGAAATACTCCAATATTTCGTTAATAGAACAACGACGGTTAAAGTAGAAG GACGTCATACGCACATAAAATTAATAAAAAGAATAAGTTTTGGATTCAAGGAAGTTTTGAGATATACCAAAAAAGTTCTA TTAGGAGTGATGCCAGAAAGATTCATAAAACTACCAAATTTCATCACAGAAGGAACAACATATTGTAAACAGTTATCCTT TCTGAGCTGA
Upstream 100 bases:
>100_bases AAAAATGGTTGATGAGATACTTGACAAAAGGGGTAAAAAAAGATATCACTCCTCATAGAACAAAAAACAAAAAAATAAAA AGAGAGAGAGGAGTGATATC
Downstream 100 bases:
>100_bases AATTACTCAACAAAAAATCTCTGTAATACCTTTTTCATCATCTCTTCAGTCTATTCTATCAACCATATTTGACAAGGAGC CTTAAACATTTGACAAATAC
Product: transposase IS204/IS1001/IS1096/IS1165 family protein
Products: NA
Alternate protein names: Transposase Subfamily
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSNKIIAQILGIDKGFKLKERKDLRKDGEIYFEVRYSKKVGIPECPYKCKGCKDKREYIVRNGKAKERIIKAGKVGTQRI YLIHRPQRYMCKKTGKSFRNEKISYRWQRITRAETENLVKNLRKMSISAIAKEHGVSVRTVSNLLDSIEVKVDWTKFQDM KDIKLGIDEHSFRGFKMVTTIVELNTSNTIAILKSDKKEELKGFLNKIPYKIKQKITEAAIDMRTSFKNAVKEELLGVKV VADHFHVVKDAQKKLRESIKIEEEVTNNNKKIPVKLFFLNGKKLLKEKKKVKKLYKTLKEHPYLKEYYRYLLMLKWMYKA ETYEEGKRRLHILIGKMEESEDPQVWRWAKTYIRWEKEILQYFVNRTTTVKVEGRHTHIKLIKRISFGFKEVLRYTKKVL LGVMPERFIKLPNFITEGTTYCKQLSFLS
Sequences:
>Translated_429_residues MSNKIIAQILGIDKGFKLKERKDLRKDGEIYFEVRYSKKVGIPECPYKCKGCKDKREYIVRNGKAKERIIKAGKVGTQRI YLIHRPQRYMCKKTGKSFRNEKISYRWQRITRAETENLVKNLRKMSISAIAKEHGVSVRTVSNLLDSIEVKVDWTKFQDM KDIKLGIDEHSFRGFKMVTTIVELNTSNTIAILKSDKKEELKGFLNKIPYKIKQKITEAAIDMRTSFKNAVKEELLGVKV VADHFHVVKDAQKKLRESIKIEEEVTNNNKKIPVKLFFLNGKKLLKEKKKVKKLYKTLKEHPYLKEYYRYLLMLKWMYKA ETYEEGKRRLHILIGKMEESEDPQVWRWAKTYIRWEKEILQYFVNRTTTVKVEGRHTHIKLIKRISFGFKEVLRYTKKVL LGVMPERFIKLPNFITEGTTYCKQLSFLS >Mature_428_residues SNKIIAQILGIDKGFKLKERKDLRKDGEIYFEVRYSKKVGIPECPYKCKGCKDKREYIVRNGKAKERIIKAGKVGTQRIY LIHRPQRYMCKKTGKSFRNEKISYRWQRITRAETENLVKNLRKMSISAIAKEHGVSVRTVSNLLDSIEVKVDWTKFQDMK DIKLGIDEHSFRGFKMVTTIVELNTSNTIAILKSDKKEELKGFLNKIPYKIKQKITEAAIDMRTSFKNAVKEELLGVKVV ADHFHVVKDAQKKLRESIKIEEEVTNNNKKIPVKLFFLNGKKLLKEKKKVKKLYKTLKEHPYLKEYYRYLLMLKWMYKAE TYEEGKRRLHILIGKMEESEDPQVWRWAKTYIRWEKEILQYFVNRTTTVKVEGRHTHIKLIKRISFGFKEVLRYTKKVLL GVMPERFIKLPNFITEGTTYCKQLSFLS
Specific function: Unknown
COG id: COG3464
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50867; Mature: 50736
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKIIAQILGIDKGFKLKERKDLRKDGEIYFEVRYSKKVGIPECPYKCKGCKDKREYIV CCCHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH RNGKAKERIIKAGKVGTQRIYLIHRPQRYMCKKTGKSFRNEKISYRWQRITRAETENLVK CCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NLRKMSISAIAKEHGVSVRTVSNLLDSIEVKVDWTKFQDMKDIKLGIDEHSFRGFKMVTT HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHCCCHHHHCCCCCCCCCCCEEEHH IVELNTSNTIAILKSDKKEELKGFLNKIPYKIKQKITEAAIDMRTSFKNAVKEELLGVKV HEEECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADHFHVVKDAQKKLRESIKIEEEVTNNNKKIPVKLFFLNGKKLLKEKKKVKKLYKTLKE HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHH HPYLKEYYRYLLMLKWMYKAETYEEGKRRLHILIGKMEESEDPQVWRWAKTYIRWEKEIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH QYFVNRTTTVKVEGRHTHIKLIKRISFGFKEVLRYTKKVLLGVMPERFIKLPNFITEGTT HHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH YCKQLSFLS HHHHHHCCC >Mature Secondary Structure SNKIIAQILGIDKGFKLKERKDLRKDGEIYFEVRYSKKVGIPECPYKCKGCKDKREYIV CCHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH RNGKAKERIIKAGKVGTQRIYLIHRPQRYMCKKTGKSFRNEKISYRWQRITRAETENLVK CCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NLRKMSISAIAKEHGVSVRTVSNLLDSIEVKVDWTKFQDMKDIKLGIDEHSFRGFKMVTT HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHCCCHHHHCCCCCCCCCCCEEEHH IVELNTSNTIAILKSDKKEELKGFLNKIPYKIKQKITEAAIDMRTSFKNAVKEELLGVKV HEEECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADHFHVVKDAQKKLRESIKIEEEVTNNNKKIPVKLFFLNGKKLLKEKKKVKKLYKTLKE HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHH HPYLKEYYRYLLMLKWMYKAETYEEGKRRLHILIGKMEESEDPQVWRWAKTYIRWEKEIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH QYFVNRTTTVKVEGRHTHIKLIKRISFGFKEVLRYTKKVLLGVMPERFIKLPNFITEGTT HHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH YCKQLSFLS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA