| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902735
Identifier: 160902735
GI number: 160902735
Start: 1368919
End: 1369569
Strand: Direct
Name: 160902735
Synonym: Pmob_1280
Alternate gene names: NA
Gene position: 1368919-1369569 (Clockwise)
Preceding gene: 160902734
Following gene: 160902736
Centisome position: 63.1
GC content: 33.03
Gene sequence:
>651_bases ATGTATATCGACATCAACACCCATCTTCTACCCAATGTTGATAACGGCTCACAAACTCTTGAAGAAACGTTAAGAGAATT AAACAATTACAAACAACATGATATAACTCATGTTATCTTCACCCCACACATAAACCATCCAACCATAAAAACAGATATAA CAAAAATAAAGGAAAAATACGCCGAAGTTAAAGAAACAATAGAATACAACACCGGTGTAAAAACCTATTTAGCATCTGAA TTATACCTAACACCACAATATAACGAATTCATTCCATTCAACGATCACTTTGTTTTTATAACCCTACCAACAGAAGCTTT CCCAATATTTCTCCTTGACTCAATCTTTCAATTACAGTTGGATGGATACGATATCGTACTACTACAAGTTGAAAAATACG ATTGGCTACTCGAAATGAAAGACGTCCTTCACAGACTAAAAGAAATGGACGTTTATTTCTGTTTGAGCTTTAATGGCTTA AACTCAAAAGCAGCAAAATTCTATCGAGACAAACATTGTTTAGATTTTTTGGCAACGAACAACAAAGCCAACAACAACGA AAAAGAAATCAACTTAAGTCTGTTTAAAAAATACTCACCAATAACTGAAAAAGCCTTTGACATATTGAACATAAGCAATG TACCAGAATAA
Upstream 100 bases:
>100_bases ATTATAATAAAAATTTTGTTTTCATAAAAAATTATGTTATAATAACAACAATGAAAACGTTTTTTCATTTAAGCAAAATC TCTCGGGGGAGGGGCTCCCT
Downstream 100 bases:
>100_bases AACAATTTTTAATATTCGTTTAATATTTAAACATTAAGATAATGTTATAATAAATCTCGAAAAACAAATCAGGGGGTTAG ACTCGAAGATGCGAAAAGCA
Product: capsular polysaccharide biosynthesis protein-like protein
Products: NA
Alternate protein names: Capsular Polysaccharide Biosynthesis Protein-Like Protein; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYIDINTHLLPNVDNGSQTLEETLRELNNYKQHDITHVIFTPHINHPTIKTDITKIKEKYAEVKETIEYNTGVKTYLASE LYLTPQYNEFIPFNDHFVFITLPTEAFPIFLLDSIFQLQLDGYDIVLLQVEKYDWLLEMKDVLHRLKEMDVYFCLSFNGL NSKAAKFYRDKHCLDFLATNNKANNNEKEINLSLFKKYSPITEKAFDILNISNVPE
Sequences:
>Translated_216_residues MYIDINTHLLPNVDNGSQTLEETLRELNNYKQHDITHVIFTPHINHPTIKTDITKIKEKYAEVKETIEYNTGVKTYLASE LYLTPQYNEFIPFNDHFVFITLPTEAFPIFLLDSIFQLQLDGYDIVLLQVEKYDWLLEMKDVLHRLKEMDVYFCLSFNGL NSKAAKFYRDKHCLDFLATNNKANNNEKEINLSLFKKYSPITEKAFDILNISNVPE >Mature_216_residues MYIDINTHLLPNVDNGSQTLEETLRELNNYKQHDITHVIFTPHINHPTIKTDITKIKEKYAEVKETIEYNTGVKTYLASE LYLTPQYNEFIPFNDHFVFITLPTEAFPIFLLDSIFQLQLDGYDIVLLQVEKYDWLLEMKDVLHRLKEMDVYFCLSFNGL NSKAAKFYRDKHCLDFLATNNKANNNEKEINLSLFKKYSPITEKAFDILNISNVPE
Specific function: Unknown
COG id: COG4464
COG function: function code GM; Capsular polysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25394; Mature: 25394
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIDINTHLLPNVDNGSQTLEETLRELNNYKQHDITHVIFTPHINHPTIKTDITKIKEKY CEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH AEVKETIEYNTGVKTYLASELYLTPQYNEFIPFNDHFVFITLPTEAFPIFLLDSIFQLQL HHHHHHHHCCCCHHHEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEE DGYDIVLLQVEKYDWLLEMKDVLHRLKEMDVYFCLSFNGLNSKAAKFYRDKHCLDFLATN CCEEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC NKANNNEKEINLSLFKKYSPITEKAFDILNISNVPE CCCCCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MYIDINTHLLPNVDNGSQTLEETLRELNNYKQHDITHVIFTPHINHPTIKTDITKIKEKY CEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH AEVKETIEYNTGVKTYLASELYLTPQYNEFIPFNDHFVFITLPTEAFPIFLLDSIFQLQL HHHHHHHHCCCCHHHEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEE DGYDIVLLQVEKYDWLLEMKDVLHRLKEMDVYFCLSFNGLNSKAAKFYRDKHCLDFLATN CCEEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC NKANNNEKEINLSLFKKYSPITEKAFDILNISNVPE CCCCCCCCEEEHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA