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The map label for this gene is ydfK [H]

Identifier: 160902601

GI number: 160902601

Start: 1221786

End: 1222478

Strand: Direct

Name: ydfK [H]

Synonym: Pmob_1140

Alternate gene names: 160902601

Gene position: 1221786-1222478 (Clockwise)

Preceding gene: 160902595

Following gene: 160902602

Centisome position: 56.32

GC content: 37.66

Gene sequence:

>693_bases
GTGTTCAACATAGCTGTCATAGTTAACACTTTAGCCGTTTTGATTGGAGGCACATTGGGAACGCTTGTAGGAAATAAATT
GCCGGATAATTTGAGACTGATTTTATTTCAAAGTGTTGGTCTAACTACCTTTTTGATTGGAGTAGGGATGGGGTTAGATG
CAAGCAATTTGATCGTGGTTTTAGTATCTTTGGCGCTTGGAGGGGTAATTGGAGAGTTATTGAGAATTGAAAACGGTCTG
GGAAAATTAGCAAACATCGTTGAAAGGTCACAAGGAGAAACACCGTTTGTAAGGGGATTTATTACTGCCACTGTTCTTTT
TGTTATTGGCCCTATGACGATAATCGGATGTCTAAATGCGGGTCTTTCGGGAGATAACTCTGTTATTTTCTTAAAATCTG
TTCTGGATGGAATCTCTTCTATGGTCTTAGCCTCGGTTTATGGCGTGGGGGTTACATTCTCTGCTGTGAGTGTTTTCTTG
ATTCAAGGGTCAATAGTTAGTTTGGCTGGAATGCTTTCTTTTCTTTCGGATCCTTACTATTTGAATGATTTTACAGCCGT
AGGAGGCGCAATGATAATTGCCATTGGAATAAGACTTTTAGAGATAAAAGATATAAAAGTAGGAAATTTTCTTCCTTCTT
TAATAATTGTCGTTTTGATAAATTATATTCTTACCTTTTTTGGCAGGTTTTGA

Upstream 100 bases:

>100_bases
TTGTAAGTTTTTTGTAATTAAACATCCATTTGATTCTTTGGTATAATTATTAAAAAACTTTTAATGGATTTAATTCCGCA
AAGAGGGAGGGGAATTAGAA

Downstream 100 bases:

>100_bases
CAAATTCCTACAAAATATGTTATAATAATTGATAGAAAGATTAATAAATATTTCCTTCTTATTTAAACTACTATTCATAT
CTCTACTACTCATACTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFNIAVIVNTLAVLIGGTLGTLVGNKLPDNLRLILFQSVGLTTFLIGVGMGLDASNLIVVLVSLALGGVIGELLRIENGL
GKLANIVERSQGETPFVRGFITATVLFVIGPMTIIGCLNAGLSGDNSVIFLKSVLDGISSMVLASVYGVGVTFSAVSVFL
IQGSIVSLAGMLSFLSDPYYLNDFTAVGGAMIIAIGIRLLEIKDIKVGNFLPSLIIVVLINYILTFFGRF

Sequences:

>Translated_230_residues
MFNIAVIVNTLAVLIGGTLGTLVGNKLPDNLRLILFQSVGLTTFLIGVGMGLDASNLIVVLVSLALGGVIGELLRIENGL
GKLANIVERSQGETPFVRGFITATVLFVIGPMTIIGCLNAGLSGDNSVIFLKSVLDGISSMVLASVYGVGVTFSAVSVFL
IQGSIVSLAGMLSFLSDPYYLNDFTAVGGAMIIAIGIRLLEIKDIKVGNFLPSLIIVVLINYILTFFGRF
>Mature_230_residues
MFNIAVIVNTLAVLIGGTLGTLVGNKLPDNLRLILFQSVGLTTFLIGVGMGLDASNLIVVLVSLALGGVIGELLRIENGL
GKLANIVERSQGETPFVRGFITATVLFVIGPMTIIGCLNAGLSGDNSVIFLKSVLDGISSMVLASVYGVGVTFSAVSVFL
IQGSIVSLAGMLSFLSDPYYLNDFTAVGGAMIIAIGIRLLEIKDIKVGNFLPSLIIVVLINYILTFFGRF

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24115; Mature: 24115

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNIAVIVNTLAVLIGGTLGTLVGNKLPDNLRLILFQSVGLTTFLIGVGMGLDASNLIVV
CEEHHHHHHHHHHHHCCHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCHHHHHHH
LVSLALGGVIGELLRIENGLGKLANIVERSQGETPFVRGFITATVLFVIGPMTIIGCLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSGDNSVIFLKSVLDGISSMVLASVYGVGVTFSAVSVFLIQGSIVSLAGMLSFLSDPYY
CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LNDFTAVGGAMIIAIGIRLLEIKDIKVGNFLPSLIIVVLINYILTFFGRF
ECHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNIAVIVNTLAVLIGGTLGTLVGNKLPDNLRLILFQSVGLTTFLIGVGMGLDASNLIVV
CEEHHHHHHHHHHHHCCHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHCCCCCHHHHHHH
LVSLALGGVIGELLRIENGLGKLANIVERSQGETPFVRGFITATVLFVIGPMTIIGCLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSGDNSVIFLKSVLDGISSMVLASVYGVGVTFSAVSVFLIQGSIVSLAGMLSFLSDPYY
CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LNDFTAVGGAMIIAIGIRLLEIKDIKVGNFLPSLIIVVLINYILTFFGRF
ECHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]