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The map label for this gene is frvX [C]

Identifier: 160902581

GI number: 160902581

Start: 1201829

End: 1202851

Strand: Direct

Name: frvX [C]

Synonym: Pmob_1120

Alternate gene names: 160902581

Gene position: 1201829-1202851 (Clockwise)

Preceding gene: 160902580

Following gene: 160902582

Centisome position: 55.4

GC content: 36.56

Gene sequence:

>1023_bases
ATGAGGAAGTATTTAAAAGACTTAACTAATCTTGCCGGTATATCTTCAAGAGAAGAAAAAATAAGAGAGTACATCAAATC
AAATGTTGCCAACAAGGTCGATGAAATTACCGAAGACAACATGGGAAACCTAATTTGTTTAATTAAAGGTAAAGATTCTT
CCAAAAAATTAATGCTTGACGCACACATGGATGAAGTTGGCTTTATGATCACCAGAATAAATGAAGACGGTACTTTTGGC
ATATCTCCCGTTGGAGGAGTTGACCCAAGGGTAGTAAAAAGTCAGAGATTAAAAATCGAAGAAAAAATATCTGCTGTTGT
CAATTCTACACCCATTCACTTAGAAAAAGAAACCGACAAAGTTGAACAGTATGAAAGTATAAAGGTCTACGCTGGATTTT
CCAACAAAGAGGAAGCATCTAAAAAGGTCCATTTGGGCGATATGGTTACATTTGATACTACTTATTATGAGGAAAATAGC
TATGCTGTAGCCAAAGCCTTTGATGATAGGGTTGGATGTTCTATTATGATGGATATAATTGACTATTTTTTTGAGAACAA
CGAGAAACCTCTTTACGATACATACTTCAATTTTGCTACTCAGGAAGAAACGGGGTTGAGAGGTACAGGAACTGCAGCTT
CAAAAATACAGCCAAATTTCGCTATCGTATTAGAAGGTACAACTGCTGGTGACAACCCTGAAAACACCCCGGATAAATGG
GCAACCCATATCGGAAATGGGCCCGTCTTAACATTCATGCATAGCGGTTTAGTACTCAACAAAGAAATCTTCGAAAAAAT
TGTAGATACTGCAAAGAAATTAGGTATTAAATTTCAATACAAAATGCGAACAGCAGGAGGAACAAACGCCGCCAGACTCG
CAAAGACCCTTTATGGAATTCCAGCAGGGGTAATATCCGTTCCATGCCGATATATTCATTCTCCACAATCTATAATGAAT
TTACAAGATTATGAAAATACCTACCAATTGGTAAAACAATTAGTCGTTAATACACCATTTTAA

Upstream 100 bases:

>100_bases
CCAACGAGGTTGTAGATGTAAAAGATGTGGAAGAAAGCGCAAAATTATTATCTTTCTTTGCTTTAAACACCAGCTTAACT
TGGAAAGGAAGTAGAAATTT

Downstream 100 bases:

>100_bases
GAGAGGTGGCAAAAAAATTGAAAGAGCTAATAAAAAATATTACGGAACTTTATGGACCAAGTGGAAGAGAAGATCAAGTG
AGAGATTTTATAAAAGAACA

Product: cellulase

Products: D-glucose; GDP

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRKYLKDLTNLAGISSREEKIREYIKSNVANKVDEITEDNMGNLICLIKGKDSSKKLMLDAHMDEVGFMITRINEDGTFG
ISPVGGVDPRVVKSQRLKIEEKISAVVNSTPIHLEKETDKVEQYESIKVYAGFSNKEEASKKVHLGDMVTFDTTYYEENS
YAVAKAFDDRVGCSIMMDIIDYFFENNEKPLYDTYFNFATQEETGLRGTGTAASKIQPNFAIVLEGTTAGDNPENTPDKW
ATHIGNGPVLTFMHSGLVLNKEIFEKIVDTAKKLGIKFQYKMRTAGGTNAARLAKTLYGIPAGVISVPCRYIHSPQSIMN
LQDYENTYQLVKQLVVNTPF

Sequences:

>Translated_340_residues
MRKYLKDLTNLAGISSREEKIREYIKSNVANKVDEITEDNMGNLICLIKGKDSSKKLMLDAHMDEVGFMITRINEDGTFG
ISPVGGVDPRVVKSQRLKIEEKISAVVNSTPIHLEKETDKVEQYESIKVYAGFSNKEEASKKVHLGDMVTFDTTYYEENS
YAVAKAFDDRVGCSIMMDIIDYFFENNEKPLYDTYFNFATQEETGLRGTGTAASKIQPNFAIVLEGTTAGDNPENTPDKW
ATHIGNGPVLTFMHSGLVLNKEIFEKIVDTAKKLGIKFQYKMRTAGGTNAARLAKTLYGIPAGVISVPCRYIHSPQSIMN
LQDYENTYQLVKQLVVNTPF
>Mature_340_residues
MRKYLKDLTNLAGISSREEKIREYIKSNVANKVDEITEDNMGNLICLIKGKDSSKKLMLDAHMDEVGFMITRINEDGTFG
ISPVGGVDPRVVKSQRLKIEEKISAVVNSTPIHLEKETDKVEQYESIKVYAGFSNKEEASKKVHLGDMVTFDTTYYEENS
YAVAKAFDDRVGCSIMMDIIDYFFENNEKPLYDTYFNFATQEETGLRGTGTAASKIQPNFAIVLEGTTAGDNPENTPDKW
ATHIGNGPVLTFMHSGLVLNKEIFEKIVDTAKKLGIKFQYKMRTAGGTNAARLAKTLYGIPAGVISVPCRYIHSPQSIMN
LQDYENTYQLVKQLVVNTPF

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=339, Percent_Identity=27.1386430678466, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788727, Length=341, Percent_Identity=29.0322580645161, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87082417, Length=337, Percent_Identity=24.3323442136499, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: 3.2.1.4

Molecular weight: Translated: 38080; Mature: 38080

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYLKDLTNLAGISSREEKIREYIKSNVANKVDEITEDNMGNLICLIKGKDSSKKLMLD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE
AHMDEVGFMITRINEDGTFGISPVGGVDPRVVKSQRLKIEEKISAVVNSTPIHLEKETDK
CCHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH
VEQYESIKVYAGFSNKEEASKKVHLGDMVTFDTTYYEENSYAVAKAFDDRVGCSIMMDII
HHHHHCEEEEECCCCHHHHHCEEEECCEEEEECEEEECCCEEEEEHHCCCCCHHHHHHHH
DYFFENNEKPLYDTYFNFATQEETGLRGTGTAASKIQPNFAIVLEGTTAGDNPENTPDKW
HHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCHHHH
ATHIGNGPVLTFMHSGLVLNKEIFEKIVDTAKKLGIKFQYKMRTAGGTNAARLAKTLYGI
HHHCCCCCEEEEECCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
PAGVISVPCRYIHSPQSIMNLQDYENTYQLVKQLVVNTPF
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKYLKDLTNLAGISSREEKIREYIKSNVANKVDEITEDNMGNLICLIKGKDSSKKLMLD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE
AHMDEVGFMITRINEDGTFGISPVGGVDPRVVKSQRLKIEEKISAVVNSTPIHLEKETDK
CCHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH
VEQYESIKVYAGFSNKEEASKKVHLGDMVTFDTTYYEENSYAVAKAFDDRVGCSIMMDII
HHHHHCEEEEECCCCHHHHHCEEEECCEEEEECEEEECCCEEEEEHHCCCCCHHHHHHHH
DYFFENNEKPLYDTYFNFATQEETGLRGTGTAASKIQPNFAIVLEGTTAGDNPENTPDKW
HHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCHHHH
ATHIGNGPVLTFMHSGLVLNKEIFEKIVDTAKKLGIKFQYKMRTAGGTNAARLAKTLYGI
HHHCCCCCEEEEECCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
PAGVISVPCRYIHSPQSIMNLQDYENTYQLVKQLVVNTPF
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPglucose; H2O

Specific reaction: GDP-glucose + H2O = D-glucose + GDP

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]