Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 160902566

GI number: 160902566

Start: 1184339

End: 1185790

Strand: Direct

Name: glgA

Synonym: Pmob_1105

Alternate gene names: 160902566

Gene position: 1184339-1185790 (Clockwise)

Preceding gene: 160902565

Following gene: 160902567

Centisome position: 54.59

GC content: 32.51

Gene sequence:

>1452_bases
ATGAAAATAGCTTACGTATCCTACGAAGTCTCTCCATTTGCTAAAGCTGGAGGCTTGGCAGACGTAGCTGGAGCCTTACC
AAAATATATTAAAAATGCAGGAGAAGATATATACGTTGTGATGCCTTTTCATAAAAACATAGAAAATAATTATGATATTT
CTAAATTTGAGGTTGTAAAAACAGGCTTAATACCTGATTCTCATACACATAAATCTCCTTTCAGTGTTTATAAAAGTTAT
TTAGAAGGTTCCTCTGTAGTAATTTATTTCATAAAAACCGATTCTCTCTATGATTCAAAAAACATATATGATGAAGAAAA
TATCTTTTTGAAGACTTCATACTTCTGTGATTCTGCTTTAAAAACTATAAAAGAATGCGAACCCGACACAAACGTTATCA
ACATAAACGACTGGCACACTTCTCTTATACCTGTATATCTAAAAACCCATTATTTACAAGACAACATTTTAAAAAAGATA
GCAACAATATTAACTATTCACAACATAGGTTATCAAGGACTTTTTAACCCTGAAGTATTAAATCAGGCTGGATTACCAAA
TTACCTCTTCAACATGAACGCTCTGGAATATTATGGAAAAGTAAATGTGTTGAAAGGCGGAATTTTGTTCAGTAATATAA
TAAATACCGTGAGTCCCACGTATGCAAAAGAAATACAAAGCGAAGAATACGGTTATGGGCTAGAAGGTATATTAAAGGTT
CGATCTGAGGATTTGTTTGGTATATTAAACGGCATTGACTATAGCATTTATGACCCCTTAAAAGATCCTCATATTTTTCA
TCCCATTGAATCATACGAAGACAAGTTAAAAAATAAAACAAGTTTACAGGAATACTTAGGGCTCACTAAGGATGAAAATA
TAACCCTGATCTCTTTTATTGGTAGGCTCTTTGAGCAAAAAGGAATCGATTTAATTTCAAAAATAATGGACTTATTGTTA
CTCAATGATATTCAATTTGTGCTATTAGGAACAGGAGATAAAAAATATGAAGAATACTTTGTTACGTTGACAAAGCTTTA
TCCTAAAAAGATATCCATAAACATAACCTTCGATGTTGATTTAGCTCAAAAGATATACGCAGGATCTGATATATTTTTGA
TGCCCTCTAAGTATGAACCATGTGGATTAGGCCAAATGTACTCAATGAGATACGGTACCGTTCCTGTTGTAAGATACACT
GGAGGGTTGAAAGATACCGTCTCAGAATACAACCCTAAAGATAAAAAAGGAACAGGGTTTGGGTTTCATGAATACAAAGA
AGCGGATTTATTATACACTTTAATGAAAGCCATATACTTTCACCAAAAAAGGAAAGATGATTGGACAAATATTTTTGAAA
ACTGTATGAAAGAAGACTTCTCTTACGAAAAAACCGCCAAGAAATACATCGAATTATACAAAATTGCCCTTGACAAAAAA
CGAGGTTACTGA

Upstream 100 bases:

>100_bases
CTTTCCTTATGGGCGGGGAGCGGGGCGAAGGGGCGCTAAAACAAGTTTTTAGAATCTTTAAAGAAAAGACAGAATTACTC
ACTAGGAGGCGATACATATT

Downstream 100 bases:

>100_bases
AATGATGGAATTGAGAAAAGATCCTATAATAAAAAGATGGGTTATAATATCTTCCGAACGATCGAAAAGACCCATGGATT
TCAAAAAACAACAGCCAAAA

Product: glycogen/starch synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MKIAYVSYEVSPFAKAGGLADVAGALPKYIKNAGEDIYVVMPFHKNIENNYDISKFEVVKTGLIPDSHTHKSPFSVYKSY
LEGSSVVIYFIKTDSLYDSKNIYDEENIFLKTSYFCDSALKTIKECEPDTNVININDWHTSLIPVYLKTHYLQDNILKKI
ATILTIHNIGYQGLFNPEVLNQAGLPNYLFNMNALEYYGKVNVLKGGILFSNIINTVSPTYAKEIQSEEYGYGLEGILKV
RSEDLFGILNGIDYSIYDPLKDPHIFHPIESYEDKLKNKTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLL
LNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYT
GGLKDTVSEYNPKDKKGTGFGFHEYKEADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIELYKIALDKK
RGY

Sequences:

>Translated_483_residues
MKIAYVSYEVSPFAKAGGLADVAGALPKYIKNAGEDIYVVMPFHKNIENNYDISKFEVVKTGLIPDSHTHKSPFSVYKSY
LEGSSVVIYFIKTDSLYDSKNIYDEENIFLKTSYFCDSALKTIKECEPDTNVININDWHTSLIPVYLKTHYLQDNILKKI
ATILTIHNIGYQGLFNPEVLNQAGLPNYLFNMNALEYYGKVNVLKGGILFSNIINTVSPTYAKEIQSEEYGYGLEGILKV
RSEDLFGILNGIDYSIYDPLKDPHIFHPIESYEDKLKNKTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLL
LNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYT
GGLKDTVSEYNPKDKKGTGFGFHEYKEADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIELYKIALDKK
RGY
>Mature_483_residues
MKIAYVSYEVSPFAKAGGLADVAGALPKYIKNAGEDIYVVMPFHKNIENNYDISKFEVVKTGLIPDSHTHKSPFSVYKSY
LEGSSVVIYFIKTDSLYDSKNIYDEENIFLKTSYFCDSALKTIKECEPDTNVININDWHTSLIPVYLKTHYLQDNILKKI
ATILTIHNIGYQGLFNPEVLNQAGLPNYLFNMNALEYYGKVNVLKGGILFSNIINTVSPTYAKEIQSEEYGYGLEGILKV
RSEDLFGILNGIDYSIYDPLKDPHIFHPIESYEDKLKNKTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLL
LNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYT
GGLKDTVSEYNPKDKKGTGFGFHEYKEADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIELYKIALDKK
RGY

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=493, Percent_Identity=34.2799188640974, Blast_Score=285, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_PETMO (A9BG68)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001568147.1
- ProteinModelPortal:   A9BG68
- SMR:   A9BG68
- GeneID:   5758253
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_1105
- HOGENOM:   HBG596384
- OMA:   IYLVGHP
- BioCyc:   PMOB403833:PMOB_1105-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 55456; Mature: 55456

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAYVSYEVSPFAKAGGLADVAGALPKYIKNAGEDIYVVMPFHKNIENNYDISKFEVVK
CEEEEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE
TGLIPDSHTHKSPFSVYKSYLEGSSVVIYFIKTDSLYDSKNIYDEENIFLKTSYFCDSAL
ECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHH
KTIKECEPDTNVININDWHTSLIPVYLKTHYLQDNILKKIATILTIHNIGYQGLFNPEVL
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
NQAGLPNYLFNMNALEYYGKVNVLKGGILFSNIINTVSPTYAKEIQSEEYGYGLEGILKV
HHCCCCHHHHCCCHHHHHCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
RSEDLFGILNGIDYSIYDPLKDPHIFHPIESYEDKLKNKTSLQEYLGLTKDENITLISFI
HHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
GRLFEQKGIDLISKIMDLLLLNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVD
HHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEHH
LAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSEYNPKDKKGTGF
HHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCC
GFHEYKEADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIELYKIALDKK
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
RGY
CCC
>Mature Secondary Structure
MKIAYVSYEVSPFAKAGGLADVAGALPKYIKNAGEDIYVVMPFHKNIENNYDISKFEVVK
CEEEEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE
TGLIPDSHTHKSPFSVYKSYLEGSSVVIYFIKTDSLYDSKNIYDEENIFLKTSYFCDSAL
ECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHH
KTIKECEPDTNVININDWHTSLIPVYLKTHYLQDNILKKIATILTIHNIGYQGLFNPEVL
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
NQAGLPNYLFNMNALEYYGKVNVLKGGILFSNIINTVSPTYAKEIQSEEYGYGLEGILKV
HHCCCCHHHHCCCHHHHHCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
RSEDLFGILNGIDYSIYDPLKDPHIFHPIESYEDKLKNKTSLQEYLGLTKDENITLISFI
HHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
GRLFEQKGIDLISKIMDLLLLNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVD
HHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEHH
LAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSEYNPKDKKGTGF
HHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCC
GFHEYKEADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIELYKIALDKK
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
RGY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA