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The map label for this gene is 160902546

Identifier: 160902546

GI number: 160902546

Start: 1159422

End: 1160219

Strand: Direct

Name: 160902546

Synonym: Pmob_1085

Alternate gene names: NA

Gene position: 1159422-1160219 (Clockwise)

Preceding gene: 160902545

Following gene: 160902547

Centisome position: 53.44

GC content: 37.22

Gene sequence:

>798_bases
ATGAGCGGAGGATCATACTCAACAGAAAAAAAAGGTTTCGATGAAACTCTAAACCTAAAAGCCATAAAACCGTATGGAGA
CGCAATGAACGATGGAAAAATGCAATTAAGCTTCACATTACCTGTTCCTGATGGAGAAGAGGCGATAGAATCTGCGAAAC
AATTACTGATGAAAATGGGTTTAGAAGAACCTATGGTTGTTTATCACAAGGAGTTGACCAAGGGTTTCACTTTTTTCATC
TGCTATGGAAGTTGCACACATACTCTTGATTATACTGCAATTCAAGTTCCTCACATAAAAACTAAAACAATGTCAATGGA
AGAAATAGACGAATACATTAGAAAGTATATAGGTAGGAAAATAAAGGTAATAGGGGCTTCAACTGGAACAGATGCGCATA
CTGTGGGTATCGATGCAATAATGAACCGTAAAGGATACGCTGGACATTATGGTTTGGAAAGATACGAAATGTTTGAAACC
CTGAACATGGGAAGTCAAGTTTTGAATGAGGTTTTCGTTGCCAAAGCATTAGAATTTGAAGCCGACGCCTTACTCGTCTC
TCAAACTGTCACTCAAAAAAATATACATGTAAAAAACCTCACAGAATTAGTAGAATTATTGGAAGCCGAAGGAATCAGAC
ACAAAGTAATTCTTATCGTAGGAGGTCCCCGAATAACTCATCAATTAGCCAAAGAAATAGGTTTTGATGCAGGATTTGGA
CCAAACACATATCCCGAAGACGTTGCATCTTACATAGCACAAGAATTATTTCAGAGATTACAGGAAAACAAACAATAA

Upstream 100 bases:

>100_bases
AAAGACCCATCGATGGCGGGAAAGGTTTGGAAGGTGTATTTGAAAAAGGGAAACATTACTTTAACCCTTTTATAACAAAA
ATGTTGGAGGGAAAACAAAG

Downstream 100 bases:

>100_bases
CTTAATAAAAATAATAAAAATAGAGAAAATTAACCTTCAAAAAGATTCGATATAATTATATATTAGTTAGAGCTTCTTAA
GGCAAGTAATTCTAAAAAGC

Product: cobalamin B12-binding domain-containing protein

Products: (3S,5S)-3,5-diaminohexanoate

Alternate protein names: D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine; D-Lysine 56-Aminomutase Beta Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSGGSYSTEKKGFDETLNLKAIKPYGDAMNDGKMQLSFTLPVPDGEEAIESAKQLLMKMGLEEPMVVYHKELTKGFTFFI
CYGSCTHTLDYTAIQVPHIKTKTMSMEEIDEYIRKYIGRKIKVIGASTGTDAHTVGIDAIMNRKGYAGHYGLERYEMFET
LNMGSQVLNEVFVAKALEFEADALLVSQTVTQKNIHVKNLTELVELLEAEGIRHKVILIVGGPRITHQLAKEIGFDAGFG
PNTYPEDVASYIAQELFQRLQENKQ

Sequences:

>Translated_265_residues
MSGGSYSTEKKGFDETLNLKAIKPYGDAMNDGKMQLSFTLPVPDGEEAIESAKQLLMKMGLEEPMVVYHKELTKGFTFFI
CYGSCTHTLDYTAIQVPHIKTKTMSMEEIDEYIRKYIGRKIKVIGASTGTDAHTVGIDAIMNRKGYAGHYGLERYEMFET
LNMGSQVLNEVFVAKALEFEADALLVSQTVTQKNIHVKNLTELVELLEAEGIRHKVILIVGGPRITHQLAKEIGFDAGFG
PNTYPEDVASYIAQELFQRLQENKQ
>Mature_264_residues
SGGSYSTEKKGFDETLNLKAIKPYGDAMNDGKMQLSFTLPVPDGEEAIESAKQLLMKMGLEEPMVVYHKELTKGFTFFIC
YGSCTHTLDYTAIQVPHIKTKTMSMEEIDEYIRKYIGRKIKVIGASTGTDAHTVGIDAIMNRKGYAGHYGLERYEMFETL
NMGSQVLNEVFVAKALEFEADALLVSQTVTQKNIHVKNLTELVELLEAEGIRHKVILIVGGPRITHQLAKEIGFDAGFGP
NTYPEDVASYIAQELFQRLQENKQ

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.3.3

Molecular weight: Translated: 29643; Mature: 29512

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGSYSTEKKGFDETLNLKAIKPYGDAMNDGKMQLSFTLPVPDGEEAIESAKQLLMKMG
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCC
LEEPMVVYHKELTKGFTFFICYGSCTHTLDYTAIQVPHIKTKTMSMEEIDEYIRKYIGRK
CCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCE
IKVIGASTGTDAHTVGIDAIMNRKGYAGHYGLERYEMFETLNMGSQVLNEVFVAKALEFE
EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADALLVSQTVTQKNIHVKNLTELVELLEAEGIRHKVILIVGGPRITHQLAKEIGFDAGFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
PNTYPEDVASYIAQELFQRLQENKQ
CCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGGSYSTEKKGFDETLNLKAIKPYGDAMNDGKMQLSFTLPVPDGEEAIESAKQLLMKMG
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCC
LEEPMVVYHKELTKGFTFFICYGSCTHTLDYTAIQVPHIKTKTMSMEEIDEYIRKYIGRK
CCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCE
IKVIGASTGTDAHTVGIDAIMNRKGYAGHYGLERYEMFETLNMGSQVLNEVFVAKALEFE
EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADALLVSQTVTQKNIHVKNLTELVELLEAEGIRHKVILIVGGPRITHQLAKEIGFDAGFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
PNTYPEDVASYIAQELFQRLQENKQ
CCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3S)-3,6-diaminohexanoate

Specific reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA