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The map label for this gene is ycgM [C]

Identifier: 160902444

GI number: 160902444

Start: 1041986

End: 1042756

Strand: Direct

Name: ycgM [C]

Synonym: Pmob_0980

Alternate gene names: 160902444

Gene position: 1041986-1042756 (Clockwise)

Preceding gene: 160902443

Following gene: 160902446

Centisome position: 48.03

GC content: 36.58

Gene sequence:

>771_bases
ATGAAACTCGTCAGATTTCAAAAAGATGGAAAAATAAGTTACGGCGTTTTGGAAGAAAACATTATAAAAGTTATTAACGG
CGATATCTTTGACGAATTCACAGTTACCGATAATATCTATCCGTTCACTGAGGTTACGTTAAAGGCTCCTTGTAATCCTA
GCAAGATCGTTTGCGTTGGCTTAAACTATCGAGATCATGCGGCAGAAATGAAGGATAGAATTCCAGAAGAACCGGTTCTC
TTCATAAAGCCGTCAACGGCTGTGATTGGGCCAAAAGAAAGTATTATATACCCAAAAATGAGCAATCAAGTAGATTATGA
GGCAGAACTGGCAGTTGTAATTAAAGACAAAATCAAAGACATAGAAGAAGACCAAGTAAAAGAACATATCTTAGGATATA
CTTGCTTTAACGATGTTACCGCCAGGGATTTACAGAAGAAAGATGGACAATGGACACGAGCAAAATCCTTTGATACTTTT
GCGCCCTTTGGTCCCACAATTGTAACAGATATTGATCCAAGTAACCTAAATATTCAACTTTTACTCAACGATCAAATCAA
GCAAAACTCAAATACTAACCAATTAATCTTTTCTATGGAAAAACTCGTAAGTTTCATATCAAAAATAATGACCTTGAATC
CTGGTGATGTAATTGCCACAGGTACACCTTCAGGGGTGGGACCAATGAATGTTGGAGATAAGGTGGCAGTTAAAATAGAG
AAAATAGGGATACTAGAAAATTATGTTAGAAACTATGCATCTAGGCTCTGA

Upstream 100 bases:

>100_bases
ATATAAAAGAACACAACGAAGTATCTGGTGAAGGGGCGCTATATACAAGGTTTTAGAATTTCTCAAGGCGGTTATCAAAA
ACAAAAACGGAGGTAAAATT

Downstream 100 bases:

>100_bases
TTATAGATGCAGTGAATAGTTGATATCACTCATCTAAATATCCCAAATTCTTCAATCGTTTTTTAATCGCCTTTATTTCC
TCTTCAGTCAATGTTTCAAT

Product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKLVRFQKDGKISYGVLEENIIKVINGDIFDEFTVTDNIYPFTEVTLKAPCNPSKIVCVGLNYRDHAAEMKDRIPEEPVL
FIKPSTAVIGPKESIIYPKMSNQVDYEAELAVVIKDKIKDIEEDQVKEHILGYTCFNDVTARDLQKKDGQWTRAKSFDTF
APFGPTIVTDIDPSNLNIQLLLNDQIKQNSNTNQLIFSMEKLVSFISKIMTLNPGDVIATGTPSGVGPMNVGDKVAVKIE
KIGILENYVRNYASRL

Sequences:

>Translated_256_residues
MKLVRFQKDGKISYGVLEENIIKVINGDIFDEFTVTDNIYPFTEVTLKAPCNPSKIVCVGLNYRDHAAEMKDRIPEEPVL
FIKPSTAVIGPKESIIYPKMSNQVDYEAELAVVIKDKIKDIEEDQVKEHILGYTCFNDVTARDLQKKDGQWTRAKSFDTF
APFGPTIVTDIDPSNLNIQLLLNDQIKQNSNTNQLIFSMEKLVSFISKIMTLNPGDVIATGTPSGVGPMNVGDKVAVKIE
KIGILENYVRNYASRL
>Mature_256_residues
MKLVRFQKDGKISYGVLEENIIKVINGDIFDEFTVTDNIYPFTEVTLKAPCNPSKIVCVGLNYRDHAAEMKDRIPEEPVL
FIKPSTAVIGPKESIIYPKMSNQVDYEAELAVVIKDKIKDIEEDQVKEHILGYTCFNDVTARDLQKKDGQWTRAKSFDTF
APFGPTIVTDIDPSNLNIQLLLNDQIKQNSNTNQLIFSMEKLVSFISKIMTLNPGDVIATGTPSGVGPMNVGDKVAVKIE
KIGILENYVRNYASRL

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=224, Percent_Identity=43.3035714285714, Blast_Score=192, Evalue=2e-49,
Organism=Homo sapiens, GI156231349, Length=224, Percent_Identity=42.8571428571429, Blast_Score=189, Evalue=1e-48,
Organism=Homo sapiens, GI215422413, Length=193, Percent_Identity=38.860103626943, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI13654274, Length=193, Percent_Identity=38.860103626943, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI66348062, Length=193, Percent_Identity=38.860103626943, Blast_Score=145, Evalue=3e-35,
Organism=Escherichia coli, GI1787428, Length=194, Percent_Identity=41.2371134020619, Blast_Score=150, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17557057, Length=186, Percent_Identity=40.3225806451613, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324161, Length=224, Percent_Identity=29.4642857142857, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28572127, Length=219, Percent_Identity=38.8127853881278, Blast_Score=156, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24663695, Length=213, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28571789, Length=200, Percent_Identity=34.5, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 28706; Mature: 28706

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRFQKDGKISYGVLEENIIKVINGDIFDEFTVTDNIYPFTEVTLKAPCNPSKIVCVG
CCEEEECCCCCEEECHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEEE
LNYRDHAAEMKDRIPEEPVLFIKPSTAVIGPKESIIYPKMSNQVDYEAELAVVIKDKIKD
CCCHHHHHHHHHCCCCCCEEEECCCCEEECCCCCEECCCCCCCCCCCEEEEEEEEHHHCC
IEEDQVKEHILGYTCFNDVTARDLQKKDGQWTRAKSFDTFAPFGPTIVTDIDPSNLNIQL
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEE
LLNDQIKQNSNTNQLIFSMEKLVSFISKIMTLNPGDVIATGTPSGVGPMNVGDKVAVKIE
EECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEE
KIGILENYVRNYASRL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLVRFQKDGKISYGVLEENIIKVINGDIFDEFTVTDNIYPFTEVTLKAPCNPSKIVCVG
CCEEEECCCCCEEECHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEEE
LNYRDHAAEMKDRIPEEPVLFIKPSTAVIGPKESIIYPKMSNQVDYEAELAVVIKDKIKD
CCCHHHHHHHHHCCCCCCEEEECCCCEEECCCCCEECCCCCCCCCCCEEEEEEEEHHHCC
IEEDQVKEHILGYTCFNDVTARDLQKKDGQWTRAKSFDTFAPFGPTIVTDIDPSNLNIQL
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEE
LLNDQIKQNSNTNQLIFSMEKLVSFISKIMTLNPGDVIATGTPSGVGPMNVGDKVAVKIE
EECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEE
KIGILENYVRNYASRL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]