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The map label for this gene is yrbE [H]

Identifier: 160902426

GI number: 160902426

Start: 1021899

End: 1022972

Strand: Direct

Name: yrbE [H]

Synonym: Pmob_0962

Alternate gene names: 160902426

Gene position: 1021899-1022972 (Clockwise)

Preceding gene: 160902425

Following gene: 160902429

Centisome position: 47.1

GC content: 37.06

Gene sequence:

>1074_bases
TTGCTTAAATTGGCTGTAATAGGTTGTGGAAGAATTGCTCAAACAAAACACTCAGAAGCAATTATAAAAAATTCTGATAT
CATTGAAAATGTGGCTGTTTGCGATCTAAAAGAAGAGAGAGCAGAACAATTTGCCAGTAAGGTTGAAAATTCTGGGTTAA
AGAAACCAGAGATATACACGGACTATAGAAAATTGTTGAAAAGATCGGATATAGACGCCGTGGCAATCGCTACCGAAAGT
GGGAAACATTATGAACTCACCATGGCAGCTCTGCAAAACAACAAACATGTGTTAGTGGAAAAACCAATGGCCCTATCGAC
AAAACATATGAATGAGATGATAGAGCTTGCAAAAAGAAAAAATTTAAAGTTAGGGGTTTGCTTTCAAAATCGGTTCAATC
CACCTATACAAGAATTAAGAAAAAAAATTACAACAAATTCCTTTGGAAGAATTCTTCACGGTCAAGCTTCCATTAGGTGG
AATAGAAACGAAGAATATTATAAACAAGCAAAATGGAGAGGCACTTGGGAATACGACGGTGGTACGTTGATGAACCAATG
TACTCACAATATAGACTTGTTATTGTGGAATATGGGCTCTGAAATAAATGAAATATACGGTGTTATTCAGAACTTCACCC
ATCCTTATATAGAAGCCGAGGATTTTGGAGGGGCAATAATAAAATTTAAAAACGGTTCCGTAGGAATTATAGAAGGGTCA
GCAAATATATATCCAAAAAACTTGGAAGAAACTCTATCGATATTTGGAGAAAAAGGCACAGTGGTTATCGGCGGCTTAGC
GGTGAATAAGATAAAATATTGGAGATTTGAAGGAGAAGATGGGCATCCATTTCAAAATCTCCCCGATCCTGATACCGTTT
ATGGTAGTGGGCACATTCCACTGTACAGAGATTTTTATCACTCGATAGAAGAGGATCGAGAACCTTTTATTAATGGCGAA
GAAGGGAAAAAGGCTGTAGAAGCTGTTTTGGGAATTTACAAGTCTGCCCTTTTGGACAGACCTGTGAAATTTCCAATCGA
TTTTTCAACTATGGAATTGAAGAGGGATATATAG

Upstream 100 bases:

>100_bases
AATATAGTTTTTGATACAAAAAATGTCACAAAAGGACTTAGAGAGAAGTATCCAGAAAAAGTTTCTTTATTATGAAAAGT
TTAAAAGTAGGTGATATTCT

Downstream 100 bases:

>100_bases
TCAGTCTAGATCTTGTTATAATCAAGATCTACTCCCCTCTTTTTTTCACATATTGATTTCTATCCCTAAACCAGGTTTGT
CCGAAAGAATTATTGTATCT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MLKLAVIGCGRIAQTKHSEAIIKNSDIIENVAVCDLKEERAEQFASKVENSGLKKPEIYTDYRKLLKRSDIDAVAIATES
GKHYELTMAALQNNKHVLVEKPMALSTKHMNEMIELAKRKNLKLGVCFQNRFNPPIQELRKKITTNSFGRILHGQASIRW
NRNEEYYKQAKWRGTWEYDGGTLMNQCTHNIDLLLWNMGSEINEIYGVIQNFTHPYIEAEDFGGAIIKFKNGSVGIIEGS
ANIYPKNLEETLSIFGEKGTVVIGGLAVNKIKYWRFEGEDGHPFQNLPDPDTVYGSGHIPLYRDFYHSIEEDREPFINGE
EGKKAVEAVLGIYKSALLDRPVKFPIDFSTMELKRDI

Sequences:

>Translated_357_residues
MLKLAVIGCGRIAQTKHSEAIIKNSDIIENVAVCDLKEERAEQFASKVENSGLKKPEIYTDYRKLLKRSDIDAVAIATES
GKHYELTMAALQNNKHVLVEKPMALSTKHMNEMIELAKRKNLKLGVCFQNRFNPPIQELRKKITTNSFGRILHGQASIRW
NRNEEYYKQAKWRGTWEYDGGTLMNQCTHNIDLLLWNMGSEINEIYGVIQNFTHPYIEAEDFGGAIIKFKNGSVGIIEGS
ANIYPKNLEETLSIFGEKGTVVIGGLAVNKIKYWRFEGEDGHPFQNLPDPDTVYGSGHIPLYRDFYHSIEEDREPFINGE
EGKKAVEAVLGIYKSALLDRPVKFPIDFSTMELKRDI
>Mature_357_residues
MLKLAVIGCGRIAQTKHSEAIIKNSDIIENVAVCDLKEERAEQFASKVENSGLKKPEIYTDYRKLLKRSDIDAVAIATES
GKHYELTMAALQNNKHVLVEKPMALSTKHMNEMIELAKRKNLKLGVCFQNRFNPPIQELRKKITTNSFGRILHGQASIRW
NRNEEYYKQAKWRGTWEYDGGTLMNQCTHNIDLLLWNMGSEINEIYGVIQNFTHPYIEAEDFGGAIIKFKNGSVGIIEGS
ANIYPKNLEETLSIFGEKGTVVIGGLAVNKIKYWRFEGEDGHPFQNLPDPDTVYGSGHIPLYRDFYHSIEEDREPFINGE
EGKKAVEAVLGIYKSALLDRPVKFPIDFSTMELKRDI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=150, Percent_Identity=31.3333333333333, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24581117, Length=120, Percent_Identity=32.5, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40617; Mature: 40617

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLAVIGCGRIAQTKHSEAIIKNSDIIENVAVCDLKEERAEQFASKVENSGLKKPEIYT
CEEEEEEECCCHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
DYRKLLKRSDIDAVAIATESGKHYELTMAALQNNKHVLVEKPMALSTKHMNEMIELAKRK
HHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHC
NLKLGVCFQNRFNPPIQELRKKITTNSFGRILHGQASIRWNRNEEYYKQAKWRGTWEYDG
CCEEEEEECCCCCCHHHHHHHHHCCCHHHHEEECCEEEEECCCHHHHHHHCCCCEEEECC
GTLMNQCTHNIDLLLWNMGSEINEIYGVIQNFTHPYIEAEDFGGAIIKFKNGSVGIIEGS
CHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCEEEEECC
ANIYPKNLEETLSIFGEKGTVVIGGLAVNKIKYWRFEGEDGHPFQNLPDPDTVYGSGHIP
CCCCCCCHHHHHHHHCCCCCEEEECEEECEEEEEEEECCCCCCCCCCCCCCCEECCCCCC
LYRDFYHSIEEDREPFINGEEGKKAVEAVLGIYKSALLDRPVKFPIDFSTMELKRDI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MLKLAVIGCGRIAQTKHSEAIIKNSDIIENVAVCDLKEERAEQFASKVENSGLKKPEIYT
CEEEEEEECCCHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
DYRKLLKRSDIDAVAIATESGKHYELTMAALQNNKHVLVEKPMALSTKHMNEMIELAKRK
HHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHC
NLKLGVCFQNRFNPPIQELRKKITTNSFGRILHGQASIRWNRNEEYYKQAKWRGTWEYDG
CCEEEEEECCCCCCHHHHHHHHHCCCHHHHEEECCEEEEECCCHHHHHHHCCCCEEEECC
GTLMNQCTHNIDLLLWNMGSEINEIYGVIQNFTHPYIEAEDFGGAIIKFKNGSVGIIEGS
CHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCEEEEECC
ANIYPKNLEETLSIFGEKGTVVIGGLAVNKIKYWRFEGEDGHPFQNLPDPDTVYGSGHIP
CCCCCCCHHHHHHHHCCCCCEEEECEEECEEEEEEEECCCCCCCCCCCCCCCEECCCCCC
LYRDFYHSIEEDREPFINGEEGKKAVEAVLGIYKSALLDRPVKFPIDFSTMELKRDI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]