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The map label for this gene is rbsC [H]

Identifier: 160902387

GI number: 160902387

Start: 975741

End: 976670

Strand: Direct

Name: rbsC [H]

Synonym: Pmob_0922

Alternate gene names: 160902387

Gene position: 975741-976670 (Clockwise)

Preceding gene: 160902386

Following gene: 160902388

Centisome position: 44.97

GC content: 36.24

Gene sequence:

>930_bases
TTGAAATTGTTTAAAACTCTCTTAGTTTTTATGAGAAAAAATCCTGCCCTTGTTGGTTTTATCATTTTGTTTGTGGTACT
TTCAATTTTTACAGACAGCTTTTTTAATCTCTATAATATTGTTAATGTTATTAGGCAAGTTTCAATAATGGCTATCCTCG
GTTTCGGAATGACACTTGTAATAATTTCTGGAGGAATAGATCTATCTGTTGGTTCAACCTTTGCTTTTAGTGCTGTTGTT
ATGGCTTCCATAGTCAAAGATGGAAGAGTCCTATTAGGAATAATTGTAGGCTTATTAATTGGCGCAGCGATAGGGGCATT
TAATGGAATTGTCATATCGAAAGGCAAAATCCAACCTTTCATTGTAACATTAGCTACAATGGCTATAGGAAGGAGCTTAA
CCTTAGCATACACTGAAGGAATCCCCATCTCACTTTTCCCAGATAGTTTTAGATTTTTGGGTAGAGGGGATATATTTGGT
ATACCAGTCCCCATTTTGATTATGTTAGGTATATTTTTTCTTTCCCTTTACATACTGAAAAAAACAAAATTGGGATTGTA
TATATACGCAATTGGAGGAAATGAGGAAGCCACGAAACTCAGTGGAGTAAACGTAGATAGATATAAAACCGTTGTTTATA
TGTTGAGTGGACTTTTTAGTGCGATCAGCGCAATAATCTTGACAGCAAGATTGAACAGCGCTCAAGCCACTTTTGGGCAA
GGGTATGAACTTGACGCAATAGCAACAGTCGTTTTGGGTGGAGCAAGTTTAGCTGGAGGAAAAGGTGGAGTGTTAGGAAC
GTTGTTTGGTGCCCTTCTTCTGGGAACAATTAACAACGGAATGAACTTGATGAATATTTCCCCATTTTATCAAGATTTAG
TTAAAGGAGTCATAATACTGTTAGCTGTTCTTTCAGAAAAAGAGGAATAA

Upstream 100 bases:

>100_bases
TGTGACAGAACTCTGATAATGCACAGAGGAAAGAAAACAGCTTTATTGGAAAAGGAAGAAATGACACCAGAAAATATACT
AAAAGCTGGAATGGGGTTGG

Downstream 100 bases:

>100_bases
AAACATTTTTCGATAGGCGAAGGGATAATGCTTTCCCTTTCCTTTTGGGTGGGGAGCGGGGGAAGGGCGCTGAGAAAAAC
ATATCAAAGGAGGTAGAGAA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKLFKTLLVFMRKNPALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLVIISGGIDLSVGSTFAFSAVV
MASIVKDGRVLLGIIVGLLIGAAIGAFNGIVISKGKIQPFIVTLATMAIGRSLTLAYTEGIPISLFPDSFRFLGRGDIFG
IPVPILIMLGIFFLSLYILKKTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLNSAQATFGQ
GYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQDLVKGVIILLAVLSEKEE

Sequences:

>Translated_309_residues
MKLFKTLLVFMRKNPALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLVIISGGIDLSVGSTFAFSAVV
MASIVKDGRVLLGIIVGLLIGAAIGAFNGIVISKGKIQPFIVTLATMAIGRSLTLAYTEGIPISLFPDSFRFLGRGDIFG
IPVPILIMLGIFFLSLYILKKTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLNSAQATFGQ
GYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQDLVKGVIILLAVLSEKEE
>Mature_309_residues
MKLFKTLLVFMRKNPALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLVIISGGIDLSVGSTFAFSAVV
MASIVKDGRVLLGIIVGLLIGAAIGAFNGIVISKGKIQPFIVTLATMAIGRSLTLAYTEGIPISLFPDSFRFLGRGDIFG
IPVPILIMLGIFFLSLYILKKTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLNSAQATFGQ
GYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQDLVKGVIILLAVLSEKEE

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=305, Percent_Identity=47.5409836065574, Blast_Score=258, Evalue=2e-70,
Organism=Escherichia coli, GI145693152, Length=294, Percent_Identity=40.8163265306122, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1788896, Length=300, Percent_Identity=38.3333333333333, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1790524, Length=294, Percent_Identity=35.0340136054422, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1789992, Length=351, Percent_Identity=33.6182336182336, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI87082395, Length=288, Percent_Identity=35.0694444444444, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI145693214, Length=250, Percent_Identity=36.4, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788471, Length=329, Percent_Identity=34.0425531914894, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1787794, Length=263, Percent_Identity=31.1787072243346, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787793, Length=303, Percent_Identity=29.042904290429, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32814; Mature: 32814

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFKTLLVFMRKNPALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLV
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IISGGIDLSVGSTFAFSAVVMASIVKDGRVLLGIIVGLLIGAAIGAFNGIVISKGKIQPF
EEECCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHH
IVTLATMAIGRSLTLAYTEGIPISLFPDSFRFLGRGDIFGIPVPILIMLGIFFLSLYILK
HHHHHHHHHCCCEEEEEECCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLNSAQATFGQ
HCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
GYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQDLVKGVIIL
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
LAVLSEKEE
HHHHHCCCC
>Mature Secondary Structure
MKLFKTLLVFMRKNPALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLV
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IISGGIDLSVGSTFAFSAVVMASIVKDGRVLLGIIVGLLIGAAIGAFNGIVISKGKIQPF
EEECCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHH
IVTLATMAIGRSLTLAYTEGIPISLFPDSFRFLGRGDIFGIPVPILIMLGIFFLSLYILK
HHHHHHHHHCCCEEEEEECCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLNSAQATFGQ
HCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
GYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQDLVKGVIIL
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
LAVLSEKEE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]