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The map label for this gene is spoVD [H]

Identifier: 160902332

GI number: 160902332

Start: 919807

End: 921498

Strand: Direct

Name: spoVD [H]

Synonym: Pmob_0867

Alternate gene names: 160902332

Gene position: 919807-921498 (Clockwise)

Preceding gene: 160902331

Following gene: 160902333

Centisome position: 42.4

GC content: 33.22

Gene sequence:

>1692_bases
ATGAAACACAAATGGTTAATTTTCACCTTCCTTTTTCTTTCAGGATATGTTTTTCTGATTATCCTCACTTTTGTGTATAA
TAACCCTTTGGCAAAGGACTTTAAAGAATTTTCAACTTCATTAGAAAATAACAAATATTCAGAACTTGTTGATTCCAATG
GCAATATGATTGTATATAACCAACAAAAATATGAAGCTTGGATCGATTTAGGCTTTATGAGATTACAAAACGACTTTAAA
AAAAATAAATATATACTGAATCAAAGGTTTAGTGATGAACAAATAGAAAACGTAAAATTTTTAAAATGGGGCACTTATGA
TACTTATGAAGAAGCGTATATAGATCTCGGAATTTTAAACAAATACTCAAGAATATATCCTGTTACCCAACGTGTTTACA
ATGAATTATTTTCTCTTGATTTACTAGTTGGAAAAGCAAATGAAACCTCCTATGGAATCGAACCTTTTTTATTAGATAAT
GCGATTTTAAACAGTCAAAAAACGATAAGTTTAAGTATAGATTTGAAGATGCAACAAATTGCATATGAAGAACTTCTAAA
TACTGTAAAAAAAGAATCCGCAGAAGGCGGAATTATTGTCGTTATGGAGAGTAAAACAGGTAAAATTAAATCGAGTGTTT
CACTTTATCCCTGGAATATTGCTTATATGGGGTATATAGAACCGGGTTCCACACTTAAACCATTATTAATTTCTACAGCA
CTAGATGAACATATAATTAATCCTAATGATAAATTTTATTCAGGATACGAATACTACCCTACAGGCAAAAAAAACTTCAA
GGTGACCGAATCTCAAGGTTATGGAATGGGAGAAATCGGGCTCAAAGAAACTCTAACATATTCCTCAAATATTGCGATAG
CGCAGATGATGGAAAAAATCCTCGAAGAATTTTCTAATCAATGGCTCTATCAAAAACTTTTAACCTATGGTTTTGGGAAA
AAAACGGGGGTAGAATTCAAAGGAGAAATCAATGGGGTAGTGCCTTATCCAGATGATTGGTATGAAATAACTCCTTTTCA
GATTGCTCTGGGGCAAGGGATAGGGATCACACCAATACAGTTAGTATCAGCTTTTAACATAATTCCCAATGGTGGTACGT
ATTTACAACCAACTTTTTTAGAAGAAAAGGAAATCTCAGAAAGACAAGTTATATCTGAACCTATCGCTAATATGGTGAAA
GAGTGGTTGAGTTATACAGTCATAGAAGGAACCGCCCAAAAAGCCTATAAGGAAGGTTTAAGAATAGGAGGGAAAACCGG
TACTGCCCAAAAGGCGGAGAGTGGCATAGGATACGTTGAAGGTAGCTATTATTCATTGTTTGTTGGCTTTTATCCAGTTG
TTGATCCCATATATACTGCTGTAGTTATAATAGATAATCCTAAAGAAGAATTTTACGGTGGAGAAGTAGCTGCACCTGTA
TTAACCAACATTTTTTATAGATATGCCAAAGAAAGTAACATACTCCAAGATCAAAAAGTTTTTTATCAAGATATTATGCC
TGATTTGACTGGTTATCCTATAACTGAAGCTTACAACGTCCTGTTGAACTTAGGAATAAAAGAAAAAAACGTAATAATCA
CTGGTAATGGCGACACTGTTGTTTCACAATCTATTCCACCAGATAAATTCCTAAAAGATCACGAAATCATTCAACTTCAC
ACAATCGATTGA

Upstream 100 bases:

>100_bases
CAGATGGAACTTAATAATATGGAATCACAGATATCTGCCTTAGATAACCAAATCGACAGATACATAGAGATCTTAAATAT
CATGGAGAAATAATGGAGCC

Downstream 100 bases:

>100_bases
AGGAGAGTTGACTTTGCAAAAAATATTAATTTTGGGAAATTCAACTATTCAAAAAAGAATCAGAATCGAAGAAATTATCG
AAAAATTCCCAAATGCTGAA

Product: peptidoglycan glycosyltransferase

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MKHKWLIFTFLFLSGYVFLIILTFVYNNPLAKDFKEFSTSLENNKYSELVDSNGNMIVYNQQKYEAWIDLGFMRLQNDFK
KNKYILNQRFSDEQIENVKFLKWGTYDTYEEAYIDLGILNKYSRIYPVTQRVYNELFSLDLLVGKANETSYGIEPFLLDN
AILNSQKTISLSIDLKMQQIAYEELLNTVKKESAEGGIIVVMESKTGKIKSSVSLYPWNIAYMGYIEPGSTLKPLLISTA
LDEHIINPNDKFYSGYEYYPTGKKNFKVTESQGYGMGEIGLKETLTYSSNIAIAQMMEKILEEFSNQWLYQKLLTYGFGK
KTGVEFKGEINGVVPYPDDWYEITPFQIALGQGIGITPIQLVSAFNIIPNGGTYLQPTFLEEKEISERQVISEPIANMVK
EWLSYTVIEGTAQKAYKEGLRIGGKTGTAQKAESGIGYVEGSYYSLFVGFYPVVDPIYTAVVIIDNPKEEFYGGEVAAPV
LTNIFYRYAKESNILQDQKVFYQDIMPDLTGYPITEAYNVLLNLGIKEKNVIITGNGDTVVSQSIPPDKFLKDHEIIQLH
TID

Sequences:

>Translated_563_residues
MKHKWLIFTFLFLSGYVFLIILTFVYNNPLAKDFKEFSTSLENNKYSELVDSNGNMIVYNQQKYEAWIDLGFMRLQNDFK
KNKYILNQRFSDEQIENVKFLKWGTYDTYEEAYIDLGILNKYSRIYPVTQRVYNELFSLDLLVGKANETSYGIEPFLLDN
AILNSQKTISLSIDLKMQQIAYEELLNTVKKESAEGGIIVVMESKTGKIKSSVSLYPWNIAYMGYIEPGSTLKPLLISTA
LDEHIINPNDKFYSGYEYYPTGKKNFKVTESQGYGMGEIGLKETLTYSSNIAIAQMMEKILEEFSNQWLYQKLLTYGFGK
KTGVEFKGEINGVVPYPDDWYEITPFQIALGQGIGITPIQLVSAFNIIPNGGTYLQPTFLEEKEISERQVISEPIANMVK
EWLSYTVIEGTAQKAYKEGLRIGGKTGTAQKAESGIGYVEGSYYSLFVGFYPVVDPIYTAVVIIDNPKEEFYGGEVAAPV
LTNIFYRYAKESNILQDQKVFYQDIMPDLTGYPITEAYNVLLNLGIKEKNVIITGNGDTVVSQSIPPDKFLKDHEIIQLH
TID
>Mature_563_residues
MKHKWLIFTFLFLSGYVFLIILTFVYNNPLAKDFKEFSTSLENNKYSELVDSNGNMIVYNQQKYEAWIDLGFMRLQNDFK
KNKYILNQRFSDEQIENVKFLKWGTYDTYEEAYIDLGILNKYSRIYPVTQRVYNELFSLDLLVGKANETSYGIEPFLLDN
AILNSQKTISLSIDLKMQQIAYEELLNTVKKESAEGGIIVVMESKTGKIKSSVSLYPWNIAYMGYIEPGSTLKPLLISTA
LDEHIINPNDKFYSGYEYYPTGKKNFKVTESQGYGMGEIGLKETLTYSSNIAIAQMMEKILEEFSNQWLYQKLLTYGFGK
KTGVEFKGEINGVVPYPDDWYEITPFQIALGQGIGITPIQLVSAFNIIPNGGTYLQPTFLEEKEISERQVISEPIANMVK
EWLSYTVIEGTAQKAYKEGLRIGGKTGTAQKAESGIGYVEGSYYSLFVGFYPVVDPIYTAVVIIDNPKEEFYGGEVAAPV
LTNIFYRYAKESNILQDQKVFYQDIMPDLTGYPITEAYNVLLNLGIKEKNVIITGNGDTVVSQSIPPDKFLKDHEIIQLH
TID

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

Organism=Escherichia coli, GI1786272, Length=351, Percent_Identity=28.7749287749288, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 64136; Mature: 64136

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50806 KRAB_RELATED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKWLIFTFLFLSGYVFLIILTFVYNNPLAKDFKEFSTSLENNKYSELVDSNGNMIVYN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEE
QQKYEAWIDLGFMRLQNDFKKNKYILNQRFSDEQIENVKFLKWGTYDTYEEAYIDLGILN
CHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHCCEEEEEECCCCCHHHHHEEHHHHH
KYSRIYPVTQRVYNELFSLDLLVGKANETSYGIEPFLLDNAILNSQKTISLSIDLKMQQI
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECHHHCCCCCEEEEEEECHHHHH
AYEELLNTVKKESAEGGIIVVMESKTGKIKSSVSLYPWNIAYMGYIEPGSTLKPLLISTA
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHH
LDEHIINPNDKFYSGYEYYPTGKKNFKVTESQGYGMGEIGLKETLTYSSNIAIAQMMEKI
HHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCHHHHEECCCCCHHHHHHHHH
LEEFSNQWLYQKLLTYGFGKKTGVEFKGEINGVVPYPDDWYEITPFQIALGQGIGITPIQ
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCHHH
LVSAFNIIPNGGTYLQPTFLEEKEISERQVISEPIANMVKEWLSYTVIEGTAQKAYKEGL
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHCCCHHHHHHHHHH
RIGGKTGTAQKAESGIGYVEGSYYSLFVGFYPVVDPIYTAVVIIDNPKEEFYGGEVAAPV
EECCCCCCCHHHHCCCCEECCCCEEEEEHHHHHHCCCEEEEEEEECCHHHHCCCCCHHHH
LTNIFYRYAKESNILQDQKVFYQDIMPDLTGYPITEAYNVLLNLGIKEKNVIITGNGDTV
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEE
VSQSIPPDKFLKDHEIIQLHTID
EECCCCHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKHKWLIFTFLFLSGYVFLIILTFVYNNPLAKDFKEFSTSLENNKYSELVDSNGNMIVYN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEE
QQKYEAWIDLGFMRLQNDFKKNKYILNQRFSDEQIENVKFLKWGTYDTYEEAYIDLGILN
CHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHCCEEEEEECCCCCHHHHHEEHHHHH
KYSRIYPVTQRVYNELFSLDLLVGKANETSYGIEPFLLDNAILNSQKTISLSIDLKMQQI
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECHHHCCCCCEEEEEEECHHHHH
AYEELLNTVKKESAEGGIIVVMESKTGKIKSSVSLYPWNIAYMGYIEPGSTLKPLLISTA
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHH
LDEHIINPNDKFYSGYEYYPTGKKNFKVTESQGYGMGEIGLKETLTYSSNIAIAQMMEKI
HHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCHHHHEECCCCCHHHHHHHHH
LEEFSNQWLYQKLLTYGFGKKTGVEFKGEINGVVPYPDDWYEITPFQIALGQGIGITPIQ
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCHHH
LVSAFNIIPNGGTYLQPTFLEEKEISERQVISEPIANMVKEWLSYTVIEGTAQKAYKEGL
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHCCCHHHHHHHHHH
RIGGKTGTAQKAESGIGYVEGSYYSLFVGFYPVVDPIYTAVVIIDNPKEEFYGGEVAAPV
EECCCCCCCHHHHCCCCEECCCCEEEEEHHHHHHCCCEEEEEEEECCHHHHCCCCCHHHH
LTNIFYRYAKESNILQDQKVFYQDIMPDLTGYPITEAYNVLLNLGIKEKNVIITGNGDTV
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEE
VSQSIPPDKFLKDHEIIQLHTID
EECCCCHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]