| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is secA [H]
Identifier: 160902328
GI number: 160902328
Start: 914954
End: 917428
Strand: Direct
Name: secA [H]
Synonym: Pmob_0863
Alternate gene names: 160902328
Gene position: 914954-917428 (Clockwise)
Preceding gene: 160902327
Following gene: 160902329
Centisome position: 42.17
GC content: 35.64
Gene sequence:
>2475_bases ATGCTTTTTGGACTGATAGACAAGAATAAAAGTTTATTAAAAAAATATTCAAAGATGGCAAATAAAATAAATGAATTAGA AGAAAGTATGAAATCTCTCAGCGACACTGAACTATCTGGAAAGACCTTAGAATATAAAAAAAGGTTACAACAAGGTGAGG GTTTGGACGATATTTTACCCGAAGCCTTTGCTGCTGTAAGAGAAGCCTCACGAAGAACTATAGGCATGCGGCATTTCGAT GTCCAGTTAATGGGAGGTATCGCTTTACATGAGGGTAAGATAACGGAGATGAAAACTGGGGAAGGAAAGACTTTAGTTGC AACCCTTCCAATTTATCTAAACGCCTTAACAGGGAAAAATGTTCATCTGGCTACCCATAACGATTATTTGGCTAAAAGAG ACGCAAATTGGATGGGACCGATATACGAGTATCTAGGTTTGAGTGTAGGATACATTCAAGCCAACATGGACAAAGAAGAT AGAAAAAAAGCATATCAAGCGGATATAACTTACGGAACTGCAAATGAGTTTGGATTTGATTATTTAAGGGACAATTTAGT TTACGAAAATACCGACAAAGTACAAAGAGGCCATTACTTTGCAATAGTTGATGAAGCTGACTCCATTTTGATAGATGAAG CTAGGACACCTTTAATCATTTCGGGTCCTTCGGATACTCCTTCCGAACTTTACAGAAGATTTGCCTCTCTGGCGAAGAAA TTTATAGTTGAAAAAGATTACACTATAGATGAAAAACAAAAGACTCTAGCGTTAACAGAAGAAGGAATAAGCAAAGCAGA GAAACTGTTATCTGTCGATAATTTATACGATCCGAGCAACATTAAGTATTTGTTCCATCTTTTGAACGCCTTAAAAGCGA TAAATTTTTTCAAAAGAGATAAAGATTACATCGTTCGCGATGGAGAAGTTGTCATCGTTGATGAATTTACAGGAAGATTG TTAGCTGGAAGAAGGTATTCCGAAGGATTGCACCAGGCTATCGAAGCAAAAGAAGGAGTAAAAATCAAAGAAGAGAGTGT AACCTTTGCAACAATAACTTTCCAAAATTATTTTAGAATGTATGAAAAATTATCAGGTATGACTGGAACTGCGAAAACTG AGGAAGATGAATTCAAAGCGATCTACAACACAGAAGTTATTGTTATCCCTACCAACGAACCTGTTATTCGGGAAGACAAA AATGATTTAATTTTTAAAACCGAAAAAGAAAAATATCAAGCAATAATTGATGAGATTGCAAAACGTAATCAAAAAGGACA ACCCGTATTGGTGGGAACAACATCCATTGAAAATAGCGAAACCATAAGTGAGATGCTGAAAAAAAGAGGAATAAAACATG AAGTTTTGAATGCCAAATACCACGAAAGGGAAGCAGAAATTATCGCTCAGGCAGGGGAAAAAAATGCCGTTACCATAGCC ACGAATATGGCTGGTAGAGGTACCGATATTAAATTGGGAGAAGGGGTCAAAGAGCTTGGAGGGCTTTTTGTTTTAGGTAC CGAAAGGCATGAAAGCAGAAGAATAGACAACCAATTGATCGGAAGATCTGGTAGGCAAGGCGATCCCGGCGAATCAAGAT TTATTATCTCTTTTGAGGACGACGTTTTACGATTGTTTGGTGGGGAAAGAATGAAAAACATGATGACTGCATTAAAAATA GAAGAAGGTCAGCCCATAGAACATAAAATGCTCAGCAGAGTCATTCGGGATGCTCAAAAGAAAATCGAAGGGATACACTT CTCGATAAGAAAAAGATTGTACGAATTTGACTCTGTAATGGACAAACAAAGATCTGTAATATACAATCATAGGGATTGGA TCCTTGAACAAGGTAACTATGATGATCATATAAAAGAGATCTTTATGGATGTTGTGGAAAGAATTGTGGAATCCTCGTGG GATGAAGTGGAAGAAAAATACGATAAAAGTAGTATTTCAGAAAAGTTGAAACAATATTTGATAATTTCTGAAATAAAGGG AAACACTCGTGAGGAAATAGAAAATGAAATTTTTGAGCTACTTTGGAAGAGATATCAATACAAAAAAGAAGAGTTTGGAG AAGATTTTAATAAAGTCGCAAAATTCGTTATGTTAAGAATAATAGACGAGAAATGGAGACACCATTTAGATGCTATTGAA GCGTTAAAAGAAGCTGTCGGATTAAGATCCTATGGTCAAAAAGACCCAGTTATGGAATTTAAAAAAGAATCTTACCTTCT TTTCGATCAGATGGTTGACAGTATATACGATGATATAGTCAGTTATTTAATGAGAATAGCAAAAGTAGTTCCAGAAAAAG AAGAAAGGGAAGCAAAAAAAATATATGCCAGTTTGAACTTTGTACATAACAACGTATCAGCGGTCGATGAATCGAATGAT GGTGGAGAAGCTAAAAGTAAAAATACCGCTAAACAAGCCAACAAGATTAAAAAAAGGTATAAAGTTAAGAGATAA
Upstream 100 bases:
>100_bases ATAAAGGAAGAATACGATAATAACGGATTGTATACAGTAGAAATAAAAATAAAGTAAAATTAAAGCTTAGAAATTTTGAT TCGAAAGGAGTGCATTATTT
Downstream 100 bases:
>100_bases TAATTGAAACCATTTTTAAGAGGTGATCAGATGATAGAATACGAAACGAAAGTAAAAATAGACGAATTAAAAGAAAATTT TGAAGATTTAAAAGACGTTT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 824; Mature: 824
Protein sequence:
>824_residues MLFGLIDKNKSLLKKYSKMANKINELEESMKSLSDTELSGKTLEYKKRLQQGEGLDDILPEAFAAVREASRRTIGMRHFD VQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKNVHLATHNDYLAKRDANWMGPIYEYLGLSVGYIQANMDKED RKKAYQADITYGTANEFGFDYLRDNLVYENTDKVQRGHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKK FIVEKDYTIDEKQKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRDKDYIVRDGEVVIVDEFTGRL LAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRMYEKLSGMTGTAKTEEDEFKAIYNTEVIVIPTNEPVIREDK NDLIFKTEKEKYQAIIDEIAKRNQKGQPVLVGTTSIENSETISEMLKKRGIKHEVLNAKYHEREAEIIAQAGEKNAVTIA TNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFEDDVLRLFGGERMKNMMTALKI EEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVMDKQRSVIYNHRDWILEQGNYDDHIKEIFMDVVERIVESSW DEVEEKYDKSSISEKLKQYLIISEIKGNTREEIENEIFELLWKRYQYKKEEFGEDFNKVAKFVMLRIIDEKWRHHLDAIE ALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDSIYDDIVSYLMRIAKVVPEKEEREAKKIYASLNFVHNNVSAVDESND GGEAKSKNTAKQANKIKKRYKVKR
Sequences:
>Translated_824_residues MLFGLIDKNKSLLKKYSKMANKINELEESMKSLSDTELSGKTLEYKKRLQQGEGLDDILPEAFAAVREASRRTIGMRHFD VQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKNVHLATHNDYLAKRDANWMGPIYEYLGLSVGYIQANMDKED RKKAYQADITYGTANEFGFDYLRDNLVYENTDKVQRGHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKK FIVEKDYTIDEKQKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRDKDYIVRDGEVVIVDEFTGRL LAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRMYEKLSGMTGTAKTEEDEFKAIYNTEVIVIPTNEPVIREDK NDLIFKTEKEKYQAIIDEIAKRNQKGQPVLVGTTSIENSETISEMLKKRGIKHEVLNAKYHEREAEIIAQAGEKNAVTIA TNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFEDDVLRLFGGERMKNMMTALKI EEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVMDKQRSVIYNHRDWILEQGNYDDHIKEIFMDVVERIVESSW DEVEEKYDKSSISEKLKQYLIISEIKGNTREEIENEIFELLWKRYQYKKEEFGEDFNKVAKFVMLRIIDEKWRHHLDAIE ALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDSIYDDIVSYLMRIAKVVPEKEEREAKKIYASLNFVHNNVSAVDESND GGEAKSKNTAKQANKIKKRYKVKR >Mature_824_residues MLFGLIDKNKSLLKKYSKMANKINELEESMKSLSDTELSGKTLEYKKRLQQGEGLDDILPEAFAAVREASRRTIGMRHFD VQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKNVHLATHNDYLAKRDANWMGPIYEYLGLSVGYIQANMDKED RKKAYQADITYGTANEFGFDYLRDNLVYENTDKVQRGHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKK FIVEKDYTIDEKQKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRDKDYIVRDGEVVIVDEFTGRL LAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRMYEKLSGMTGTAKTEEDEFKAIYNTEVIVIPTNEPVIREDK NDLIFKTEKEKYQAIIDEIAKRNQKGQPVLVGTTSIENSETISEMLKKRGIKHEVLNAKYHEREAEIIAQAGEKNAVTIA TNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFEDDVLRLFGGERMKNMMTALKI EEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVMDKQRSVIYNHRDWILEQGNYDDHIKEIFMDVVERIVESSW DEVEEKYDKSSISEKLKQYLIISEIKGNTREEIENEIFELLWKRYQYKKEEFGEDFNKVAKFVMLRIIDEKWRHHLDAIE ALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDSIYDDIVSYLMRIAKVVPEKEEREAKKIYASLNFVHNNVSAVDESND GGEAKSKNTAKQANKIKKRYKVKR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=832, Percent_Identity=48.3173076923077, Blast_Score=763, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001650 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF00271 Helicase_C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 94916; Mature: 94916
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGLIDKNKSLLKKYSKMANKINELEESMKSLSDTELSGKTLEYKKRLQQGEGLDDILP CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH EAFAAVREASRRTIGMRHFDVQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKN HHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCEEEECCCCCEEEEEHHHHHHHCCCCE VHLATHNDYLAKRDANWMGPIYEYLGLSVGYIQANMDKEDRKKAYQADITYGTANEFGFD EEEEECCCHHHHCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCEECCCHHCCHH YLRDNLVYENTDKVQRGHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKK HHHCCCEECCCCHHCCCCEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH FIVEKDYTIDEKQKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRD HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC KDYIVRDGEVVIVDEFTGRLLAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRM CCCEEECCCEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCEEEEEEEHHHHHHH YEKLSGMTGTAKTEEDEFKAIYNTEVIVIPTNEPVIREDKNDLIFKTEKEKYQAIIDEIA HHHHCCCCCCCCCCHHHHHHEECCEEEEECCCCCCEECCCCCCEEECHHHHHHHHHHHHH KRNQKGQPVLVGTTSIENSETISEMLKKRGIKHEVLNAKYHEREAEIIAQAGEKNAVTIA HCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEE TNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFED ECCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH DVLRLFGGERMKNMMTALKIEEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVM HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKQRSVIYNHRDWILEQGNYDDHIKEIFMDVVERIVESSWDEVEEKYDKSSISEKLKQYL HHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IISEIKGNTREEIENEIFELLWKRYQYKKEEFGEDFNKVAKFVMLRIIDEKWRHHLDAIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDSIYDDIVSYLMRIAKVVPEKEEREAKK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IYASLNFVHNNVSAVDESNDGGEAKSKNTAKQANKIKKRYKVKR HHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLFGLIDKNKSLLKKYSKMANKINELEESMKSLSDTELSGKTLEYKKRLQQGEGLDDILP CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH EAFAAVREASRRTIGMRHFDVQLMGGIALHEGKITEMKTGEGKTLVATLPIYLNALTGKN HHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCEEEECCCCCEEEEEHHHHHHHCCCCE VHLATHNDYLAKRDANWMGPIYEYLGLSVGYIQANMDKEDRKKAYQADITYGTANEFGFD EEEEECCCHHHHCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCEECCCHHCCHH YLRDNLVYENTDKVQRGHYFAIVDEADSILIDEARTPLIISGPSDTPSELYRRFASLAKK HHHCCCEECCCCHHCCCCEEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH FIVEKDYTIDEKQKTLALTEEGISKAEKLLSVDNLYDPSNIKYLFHLLNALKAINFFKRD HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC KDYIVRDGEVVIVDEFTGRLLAGRRYSEGLHQAIEAKEGVKIKEESVTFATITFQNYFRM CCCEEECCCEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCEEEEEEEHHHHHHH YEKLSGMTGTAKTEEDEFKAIYNTEVIVIPTNEPVIREDKNDLIFKTEKEKYQAIIDEIA HHHHCCCCCCCCCCHHHHHHEECCEEEEECCCCCCEECCCCCCEEECHHHHHHHHHHHHH KRNQKGQPVLVGTTSIENSETISEMLKKRGIKHEVLNAKYHEREAEIIAQAGEKNAVTIA HCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEE TNMAGRGTDIKLGEGVKELGGLFVLGTERHESRRIDNQLIGRSGRQGDPGESRFIISFED ECCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH DVLRLFGGERMKNMMTALKIEEGQPIEHKMLSRVIRDAQKKIEGIHFSIRKRLYEFDSVM HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKQRSVIYNHRDWILEQGNYDDHIKEIFMDVVERIVESSWDEVEEKYDKSSISEKLKQYL HHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IISEIKGNTREEIENEIFELLWKRYQYKKEEFGEDFNKVAKFVMLRIIDEKWRHHLDAIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALKEAVGLRSYGQKDPVMEFKKESYLLFDQMVDSIYDDIVSYLMRIAKVVPEKEEREAKK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IYASLNFVHNNVSAVDESNDGGEAKSKNTAKQANKIKKRYKVKR HHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]