| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is yfaD [C]
Identifier: 160902116
GI number: 160902116
Start: 693795
End: 694538
Strand: Direct
Name: yfaD [C]
Synonym: Pmob_0643
Alternate gene names: 160902116
Gene position: 693795-694538 (Clockwise)
Preceding gene: 160902115
Following gene: 160902118
Centisome position: 31.98
GC content: 32.93
Gene sequence:
>744_bases ATGTCGTACAAAACAAAGATAAAAGGACAAGATGGCTACATATACATTCTGATGGAACACAAAAGCTACATTGAAGGGAA AGTAATCTTTCAACTGTTGAGATATATTACGAGCATCTGGGAAGAAAAATACGATCCCAAAACAAAAAAGGTACCAATAA TAATACCGATGGTAATATACCATGGAAGAGAAATCTGGAACGTAGAAACGAATTTATTAAATATGGTACAAGGGATAGAA GATTTACCAAATGAACTAAAAACATACTTACCTACATACCGATATGAAATATGTGATTTCTCGATCAAAAGGAAAAAAAG GATAATAGGATTAACAGCGATGAAAGTTGCAATAGAAGCAATGAGAGCAGGAACGGCAATGACCAAAGAAGAATTTAAAG AAAGATTAAGAAGGGTATTTGAATACATAAAACAACTACCAGAAGAAGAGGTACATGAATGGTTTGAAGAGTGTATGATC TACTTACTAAACGTAAGGGAAGATGTAACGATAGAGGAGATATTAAAAGTACAAAAAGAAATAATGCCTGGAAGGGGTGA AATAGTTATGACAATAGCTGAAAAGTTAAGAAACGAAGGTAAATTAGAAGGTAAATTGGAAGGTAAAGTTGAAGGCAAAC TTGAAGGCGAAAGAGAGTTCGCAATTAGAATATTAAGCAAAAGATTTGGTAACCAACTAACTGAAGAGATAAAAGTCAAG TATGATAGTCCCCTATTTAATTAA
Upstream 100 bases:
>100_bases CCTTAAATGGGCGGGCAGCGTGGAGAAGGGGCGCCTTAAAGCTTATTAAACAGGAGTTGGATAATAAAATAACACACCTT TAAAAACATATGGTATAATT
Downstream 100 bases:
>100_bases AAAAATTTTAAATATTTTCTATTTAAAAAATCCTCATTCAGTCATACTTCTAGGTTGAAAGTAGCAGTTGTTGTTTATTC AGGTTACTATTTCTCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIE DLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMI YLLNVREDVTIEEILKVQKEIMPGRGEIVMTIAEKLRNEGKLEGKLEGKVEGKLEGEREFAIRILSKRFGNQLTEEIKVK YDSPLFN
Sequences:
>Translated_247_residues MSYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIE DLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMI YLLNVREDVTIEEILKVQKEIMPGRGEIVMTIAEKLRNEGKLEGKLEGKVEGKLEGEREFAIRILSKRFGNQLTEEIKVK YDSPLFN >Mature_246_residues SYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIED LPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIY LLNVREDVTIEEILKVQKEIMPGRGEIVMTIAEKLRNEGKLEGKLEGKVEGKLEGEREFAIRILSKRFGNQLTEEIKVKY DSPLFN
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29299; Mature: 29168
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIY CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH HGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAIEA CCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQKE HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IMPGRGEIVMTIAEKLRNEGKLEGKLEGKVEGKLEGEREFAIRILSKRFGNQLTEEIKVK HCCCCCHHHHHHHHHHHCCCCCCCEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDSPLFN CCCCCCC >Mature Secondary Structure SYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIY CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH HGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAIEA CCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQKE HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IMPGRGEIVMTIAEKLRNEGKLEGKLEGKVEGKLEGEREFAIRILSKRFGNQLTEEIKVK HCCCCCHHHHHHHHHHHCCCCCCCEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDSPLFN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA