Click here to switch to the map view.

The map label for this gene is 160901886

Identifier: 160901886

GI number: 160901886

Start: 429658

End: 431448

Strand: Direct

Name: 160901886

Synonym: Pmob_0402

Alternate gene names: NA

Gene position: 429658-431448 (Clockwise)

Preceding gene: 160901885

Following gene: 160901887

Centisome position: 19.8

GC content: 30.99

Gene sequence:

>1791_bases
TTGAAAGAAGTAAAATATGCTATAGTTTACCTGAATATTGATCCCAATTATGCAAAGTTGAATAATCTCCCTGTAAAATT
ACCTATTTTAGTGGAAGATTTTCAAAAAGCAAGAAAAACCAATAAAATACCTTTGGACATAATTATTAGAGGATTAGAAG
CTCAAATTGATATAGATAAAAACAATCGATATTACTTATCTTACTTGGTTTATTATTATTATGAAGCTTTTAAAAAATCC
CTCAACGATTCAGATTTTGAAAAGGCTAAGGAATTTTTAGATAAGGCAGGTAAAACTTACCCCGATTATCGATTGCATTT
TTATACTGGATTATACTACAAAAAATTAGGAAATCTTGAACTGGCAGAGTTACATTTAAAACAATCAATAAAAGAAAAGC
CAAATTTTGCATATGGTTATTATGAACTCGGTAATCTTATGTATGAAAGAAATGTATACGACGAAGCAATAGAATATTAT
TCTAAATCCGTCGAACTTGAAAAGGACTTTACGTTAGGGTTTCTGAAAATGGCAGATGTATACATGGAAAATGGCAGATT
TGAAGAAGCTATACCCCTTCTACAAAAATGCATAGAAATTGATGAAAAATTCGTTCCTGCCTATGAAAGATTGGGTGTTG
CTCTGAATATGCTTCAACGCTATAAAGATGCACACAAAGTCCACCAAAAAGCTTTAGAAATAGATAGCAATAGATATGAA
ATTTATTATAACGATGCTCATTCATTGGCTAGATTAGGAAACCACAACGAATCAATAAAAGCTTTAGAAAAAGCCGCCTC
TTTGAATGAAACAGATTATATACTTCACGAATTAGCTTTGGAATATAAAAACATGGGAAGATACTTACAAGCAATTGAAA
CAGAGGAAAAAGCTTTAAAATTAGCTTCAGAAGAAAATAAAGACCTTATTGTTTTAACTTTATTAAAACTCTATGTAATA
ATAGAAGACGAAGAACAAGTGGAAAAATATTTTGAAATTTTAAATTTGAATTCTGACTTTCACGAAGCTGCTGTTAATTT
CAAAGTATTGTTCGAATTATCCCAAGGTAGAGTAGAAAAAGTGAAAGAGATATTATTAGGAGAATCCGTATCAAGTTTTA
CTCTACTAATAGATAAATTAGATAGATTAGATTTTTACATCTCCAAACTTGAAGATTTTACAGATAAAAATATCTCTGAC
TCAATATTTGAAAGTATAGACGAATTTGGCAACATCGACCCTTTTACTTTGTCGGAGCATCTGGTAGCTAAAGGAATAGA
ACGTCCATTCATTAGCTGGTTAAAAGAGAGTTCAATAGAGTCAAAGTCATATCCAGATGGTGTTGAATTACTCACAAACG
GCCTACTTCTTTCTGGCTTTAATTACGGCCTATCGGAAAGGGTAGCAACAACTATATCACAGTTTCTTTGGAAAGACGGT
GATGGGTTAGCTTTCGGTAGATTACTCTTAAGATTCTACCAAGATCGAATCTTAGGAGAATCGTTACCCTTAGAGCACTT
TATTCAAGAAAATGTGGAAGAAATCAAAGATATGTCTTTTACTTTTGCCCAAATATTTGCTAATTACGAAGAACATTTGA
TGGATTTCGACTCGATAGTAGATTTTAAAATAAATAACTTTAAAGATGCTCTAAAAGTTTTTTTGTCCATGTCTAGAATA
CAAACTACAGCCGAAGAAATAACTTCAGTCAAATTCAAAGATCATAACACAAAAATTTTATCTTTATTCATACAGAATCT
TAACTCGATTTCCAACTCTTTTTTGCAGTAA

Upstream 100 bases:

>100_bases
GGTTGCAAGTTATTTAGGTGCCGTTTGTGGTTCTCTTTTTTTTGCCTTCAAATATAAGGCTTTCAATTAGTTTAAAAAAG
TATGAAGAGGTGCGTTTCTT

Downstream 100 bases:

>100_bases
ATTCCATACCAAAAATAAATTTTTTAGAGGTGCTACATGAAAAATTATTTAATAATATTTGTAGTGATTTTATTTTCCAC
TATTACTTTTGCTTTGAATA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Domain Protein; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Protein; TPR Domain Containing Protein; Sulfotransferase; Serine/Threonine Protein Kinase With TPR Repeats; Peptidase S1 And S6 Chymotrypsin/Hap; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Domain Protein; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKEVKYAIVYLNIDPNYAKLNNLPVKLPILVEDFQKARKTNKIPLDIIIRGLEAQIDIDKNNRYYLSYLVYYYYEAFKKS
LNDSDFEKAKEFLDKAGKTYPDYRLHFYTGLYYKKLGNLELAELHLKQSIKEKPNFAYGYYELGNLMYERNVYDEAIEYY
SKSVELEKDFTLGFLKMADVYMENGRFEEAIPLLQKCIEIDEKFVPAYERLGVALNMLQRYKDAHKVHQKALEIDSNRYE
IYYNDAHSLARLGNHNESIKALEKAASLNETDYILHELALEYKNMGRYLQAIETEEKALKLASEENKDLIVLTLLKLYVI
IEDEEQVEKYFEILNLNSDFHEAAVNFKVLFELSQGRVEKVKEILLGESVSSFTLLIDKLDRLDFYISKLEDFTDKNISD
SIFESIDEFGNIDPFTLSEHLVAKGIERPFISWLKESSIESKSYPDGVELLTNGLLLSGFNYGLSERVATTISQFLWKDG
DGLAFGRLLLRFYQDRILGESLPLEHFIQENVEEIKDMSFTFAQIFANYEEHLMDFDSIVDFKINNFKDALKVFLSMSRI
QTTAEEITSVKFKDHNTKILSLFIQNLNSISNSFLQ

Sequences:

>Translated_596_residues
MKEVKYAIVYLNIDPNYAKLNNLPVKLPILVEDFQKARKTNKIPLDIIIRGLEAQIDIDKNNRYYLSYLVYYYYEAFKKS
LNDSDFEKAKEFLDKAGKTYPDYRLHFYTGLYYKKLGNLELAELHLKQSIKEKPNFAYGYYELGNLMYERNVYDEAIEYY
SKSVELEKDFTLGFLKMADVYMENGRFEEAIPLLQKCIEIDEKFVPAYERLGVALNMLQRYKDAHKVHQKALEIDSNRYE
IYYNDAHSLARLGNHNESIKALEKAASLNETDYILHELALEYKNMGRYLQAIETEEKALKLASEENKDLIVLTLLKLYVI
IEDEEQVEKYFEILNLNSDFHEAAVNFKVLFELSQGRVEKVKEILLGESVSSFTLLIDKLDRLDFYISKLEDFTDKNISD
SIFESIDEFGNIDPFTLSEHLVAKGIERPFISWLKESSIESKSYPDGVELLTNGLLLSGFNYGLSERVATTISQFLWKDG
DGLAFGRLLLRFYQDRILGESLPLEHFIQENVEEIKDMSFTFAQIFANYEEHLMDFDSIVDFKINNFKDALKVFLSMSRI
QTTAEEITSVKFKDHNTKILSLFIQNLNSISNSFLQ
>Mature_596_residues
MKEVKYAIVYLNIDPNYAKLNNLPVKLPILVEDFQKARKTNKIPLDIIIRGLEAQIDIDKNNRYYLSYLVYYYYEAFKKS
LNDSDFEKAKEFLDKAGKTYPDYRLHFYTGLYYKKLGNLELAELHLKQSIKEKPNFAYGYYELGNLMYERNVYDEAIEYY
SKSVELEKDFTLGFLKMADVYMENGRFEEAIPLLQKCIEIDEKFVPAYERLGVALNMLQRYKDAHKVHQKALEIDSNRYE
IYYNDAHSLARLGNHNESIKALEKAASLNETDYILHELALEYKNMGRYLQAIETEEKALKLASEENKDLIVLTLLKLYVI
IEDEEQVEKYFEILNLNSDFHEAAVNFKVLFELSQGRVEKVKEILLGESVSSFTLLIDKLDRLDFYISKLEDFTDKNISD
SIFESIDEFGNIDPFTLSEHLVAKGIERPFISWLKESSIESKSYPDGVELLTNGLLLSGFNYGLSERVATTISQFLWKDG
DGLAFGRLLLRFYQDRILGESLPLEHFIQENVEEIKDMSFTFAQIFANYEEHLMDFDSIVDFKINNFKDALKVFLSMSRI
QTTAEEITSVKFKDHNTKILSLFIQNLNSISNSFLQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI32307150, Length=215, Percent_Identity=26.046511627907, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=198, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=198, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=207, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24585827, Length=207, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24585829, Length=207, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24647123, Length=235, Percent_Identity=21.2765957446809, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69579; Mature: 69579

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVKYAIVYLNIDPNYAKLNNLPVKLPILVEDFQKARKTNKIPLDIIIRGLEAQIDIDK
CCCEEEEEEEEEECCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHEECCCEEEEECC
NNRYYLSYLVYYYYEAFKKSLNDSDFEKAKEFLDKAGKTYPDYRLHFYTGLYYKKLGNLE
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCH
LAELHLKQSIKEKPNFAYGYYELGNLMYERNVYDEAIEYYSKSVELEKDFTLGFLKMADV
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
YMENGRFEEAIPLLQKCIEIDEKFVPAYERLGVALNMLQRYKDAHKVHQKALEIDSNRYE
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IYYNDAHSLARLGNHNESIKALEKAASLNETDYILHELALEYKNMGRYLQAIETEEKALK
EEECCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASEENKDLIVLTLLKLYVIIEDEEQVEKYFEILNLNSDFHEAAVNFKVLFELSQGRVEK
HHCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCHHHH
VKEILLGESVSSFTLLIDKLDRLDFYISKLEDFTDKNISDSIFESIDEFGNIDPFTLSEH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHH
LVAKGIERPFISWLKESSIESKSYPDGVELLTNGLLLSGFNYGLSERVATTISQFLWKDG
HHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHCCC
DGLAFGRLLLRFYQDRILGESLPLEHFIQENVEEIKDMSFTFAQIFANYEEHLMDFDSIV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFKINNFKDALKVFLSMSRIQTTAEEITSVKFKDHNTKILSLFIQNLNSISNSFLQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEVKYAIVYLNIDPNYAKLNNLPVKLPILVEDFQKARKTNKIPLDIIIRGLEAQIDIDK
CCCEEEEEEEEEECCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHEECCCEEEEECC
NNRYYLSYLVYYYYEAFKKSLNDSDFEKAKEFLDKAGKTYPDYRLHFYTGLYYKKLGNLE
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCH
LAELHLKQSIKEKPNFAYGYYELGNLMYERNVYDEAIEYYSKSVELEKDFTLGFLKMADV
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
YMENGRFEEAIPLLQKCIEIDEKFVPAYERLGVALNMLQRYKDAHKVHQKALEIDSNRYE
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IYYNDAHSLARLGNHNESIKALEKAASLNETDYILHELALEYKNMGRYLQAIETEEKALK
EEECCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASEENKDLIVLTLLKLYVIIEDEEQVEKYFEILNLNSDFHEAAVNFKVLFELSQGRVEK
HHCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCHHHH
VKEILLGESVSSFTLLIDKLDRLDFYISKLEDFTDKNISDSIFESIDEFGNIDPFTLSEH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHH
LVAKGIERPFISWLKESSIESKSYPDGVELLTNGLLLSGFNYGLSERVATTISQFLWKDG
HHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHCCC
DGLAFGRLLLRFYQDRILGESLPLEHFIQENVEEIKDMSFTFAQIFANYEEHLMDFDSIV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFKINNFKDALKVFLSMSRIQTTAEEITSVKFKDHNTKILSLFIQNLNSISNSFLQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA