Click here to switch to the map view.

The map label for this gene is ycbZ [H]

Identifier: 160901708

GI number: 160901708

Start: 222998

End: 225370

Strand: Direct

Name: ycbZ [H]

Synonym: Pmob_0220

Alternate gene names: 160901708

Gene position: 222998-225370 (Clockwise)

Preceding gene: 160901707

Following gene: 160901710

Centisome position: 10.28

GC content: 33.29

Gene sequence:

>2373_bases
ATGAAACTAACTTTAAGTGATTTTGAAATTAAAATCCCAGATATCAAAATCGATAACACTTCAGAAATAAAAATTGGTTC
TTATCAAGATTACACCATACAAACGGATGCTTGTGAAATTTTACAATTTGCCTTGGAAAGCAGCAACGATTCAAACAATG
TTTTCTTAGTTGGTCCAAATCGTAGTGGTAGAAGAGGTATGACTCGAAAGATAATCGAAAGAATATCGTTAACTCAAAAA
GCTCCTCAAGATCTTATGTATGTTTTTAATTTTAAGGAAGAAAAGAAACCCAAGTTGTTGAAACTGCCCGCCGGAGAAGC
CAAAAATTTCAAATCTGAATTGCAATCTATTATTAATTCCTCTGTACAAGTTTTAAATAAAACGATGCAGACAGAAGAAT
TTCAACAAAGGTTAAGTTCGTTAGAAAAAGAATACAACGAGCAGAGGGAAAAATTGTGGTCAGATCTGAGAAAACAGGCT
CAAGCTCTTGGTTTTATACTTGAGGCTTCTGAAAAAGGTATAGTGAGCGTTCCAGTGTACGATGGCAAAAAAATAAGCAC
CTCTGAGTTTGAAAATCTTCCGGAAGAGATAAAAGAGTATTTTCGAAAAAATTCCGAGAAGTTGCGAGAATTAATTGAAA
AAACAATGGTAAAGATCACGGAGATGGATAAAGAATACTGGGAGGAAGTTAAAAACTTACGACGTTACTGGGCAGCTTTT
AGCTTAGCTAAGCTTTTCGAACCCCTTGAAAAGAAATATCTCAAATATTCTGATGTTTTTGAATACCTTCAAAACTTGAA
AGAGGACATAGCTTCTCACCTATCCCAATTAACTTCCGAAAATCAAAATCTAATAACTTATCTTAAAGAAAAAAGATACA
ATGTCAACATTATAGTGGATAATTCTTATCTACAAGGTGCACCTGTGATAGAAGAAGACAATCCCACTTTTTCAAATTTA
GTTGGTAGAATAGAGTATTATTCCCAAATGGGACTCCTTCAAACGGATTTTACAATGATAAAATCTGGAGCTTTTCACAG
GGCAAACGGTGGTTATCTAATAATGGAAGCAGAAAAAGTTTTAAGAAAACCTTACGCGTGGGAGGTAATTAAAAGGTTTT
TATCGGAGAAAGAAGTAAAAATTGAAAATATTCAAACCGCTGAAGGCTATTCGAGTGTTGAAAGTTTGGAACCAGAACCT
TTATCTTTAACCGTTAAAGTGATTCTCATAGGAGAAGAATGGGTGTACAATTTATTAAGAGTTTACGATAGCGAATTCGA
AAAACTTTTTCCCATAAAATCACAATTTGACTATGAGGCAGAGTTAAGCAACGAGAATTTAAATAAATTTTTAGCTTTCT
TAAGCAACACAGTGGAAGAAAACGATATCTCACACTTTACAAAAGATGCGATTGAAGAGATTATCAAGTACAGTTGTAGG
ATGAATGGAAACAACAAAAGGTTCTCCTTAAGATTGGGGGAAATTAAGAATCTACTAATAGACTCTTTCAACATTTCACG
GAAAAATGGATCAAGCCCATACATAACCGCCAAAGATATAAAAGATACTACAAAGTTTAGAGAAAAAATGTTTTCCTTTC
ATAAGAAAAAATTATTTAATGCGATAAAAGAACAAAAGATTGACATAAGAACTGAAGGCTCTGAAGTCGGACAAATAAAT
GGATTGACTGTTTTGGATACAGGAGATTTCACCTTTGGGCATCCCGTCAAAATAACAGCAAAAAGTTACAGATCCTCTTC
TGAAAAAATCATAAACATACACAGGGATATCGATTTAAGCGGGAAAATATACAAAAAATCCTCATTGATCATAGAAAACT
ATTTCAAACATAAATTTTCTTCTTTCATAGAAACAGGTTTCGGTGTATCTTTAAATTTTGAACAAGTTTATTCTATCATC
GAAGGAGACAGCGCTACAATAGCAGAAACGCTGGCTTTAATGTCTTCCATAGCTAACATTCCATTGAAACAAAATATTGC
CATCACCGGATCTATGAATCAAAACGGAGAAGTTTTGCCAGTTGGAGGAATAATCGAAAAAATTGAAGGATTTTACGACG
CCTGTAAAAATCTCAATTTTACTGGAGATCAAGGGGTGATTATTCCAAGTAAAAATATCGATAATATCGTATTGAAAGAC
GAAATAAATGAAGATATACAAAATGGAAAGTTCCATATTTGGGCTATTGATAATATAGATGAAGGGATCGAACTAATGAC
AGATTACAAAGCAGGGACACCAAATGAAAACGGTGAATACGAAGAAGGCACATTTTATTACTATGTAAGTGAAAACCTCA
AGAAATTATCAAAAGAGGAGAAAAAAGAAAAAGACGAAAAAGATAACAAATAG

Upstream 100 bases:

>100_bases
ATTCCTTAGAAGGGTGGGGAGCGGGGCGAAGGGGCCGCTATTAAACAAGTTTTTAGAATTTTTAACAACGGTAAAAGTGC
AAATAATGGAGGCGTAGATA

Downstream 100 bases:

>100_bases
CTGTGATTAATTTTAAAATCCCCCATCGTATATAGATGGGGGATTTTAATTATAAACCATAAATTGCAGAAAACTTTTCT
TTTATATACTCTACAAAATA

Product: peptidase S16 lon domain-containing protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 790; Mature: 790

Protein sequence:

>790_residues
MKLTLSDFEIKIPDIKIDNTSEIKIGSYQDYTIQTDACEILQFALESSNDSNNVFLVGPNRSGRRGMTRKIIERISLTQK
APQDLMYVFNFKEEKKPKLLKLPAGEAKNFKSELQSIINSSVQVLNKTMQTEEFQQRLSSLEKEYNEQREKLWSDLRKQA
QALGFILEASEKGIVSVPVYDGKKISTSEFENLPEEIKEYFRKNSEKLRELIEKTMVKITEMDKEYWEEVKNLRRYWAAF
SLAKLFEPLEKKYLKYSDVFEYLQNLKEDIASHLSQLTSENQNLITYLKEKRYNVNIIVDNSYLQGAPVIEEDNPTFSNL
VGRIEYYSQMGLLQTDFTMIKSGAFHRANGGYLIMEAEKVLRKPYAWEVIKRFLSEKEVKIENIQTAEGYSSVESLEPEP
LSLTVKVILIGEEWVYNLLRVYDSEFEKLFPIKSQFDYEAELSNENLNKFLAFLSNTVEENDISHFTKDAIEEIIKYSCR
MNGNNKRFSLRLGEIKNLLIDSFNISRKNGSSPYITAKDIKDTTKFREKMFSFHKKKLFNAIKEQKIDIRTEGSEVGQIN
GLTVLDTGDFTFGHPVKITAKSYRSSSEKIINIHRDIDLSGKIYKKSSLIIENYFKHKFSSFIETGFGVSLNFEQVYSII
EGDSATIAETLALMSSIANIPLKQNIAITGSMNQNGEVLPVGGIIEKIEGFYDACKNLNFTGDQGVIIPSKNIDNIVLKD
EINEDIQNGKFHIWAIDNIDEGIELMTDYKAGTPNENGEYEEGTFYYYVSENLKKLSKEEKKEKDEKDNK

Sequences:

>Translated_790_residues
MKLTLSDFEIKIPDIKIDNTSEIKIGSYQDYTIQTDACEILQFALESSNDSNNVFLVGPNRSGRRGMTRKIIERISLTQK
APQDLMYVFNFKEEKKPKLLKLPAGEAKNFKSELQSIINSSVQVLNKTMQTEEFQQRLSSLEKEYNEQREKLWSDLRKQA
QALGFILEASEKGIVSVPVYDGKKISTSEFENLPEEIKEYFRKNSEKLRELIEKTMVKITEMDKEYWEEVKNLRRYWAAF
SLAKLFEPLEKKYLKYSDVFEYLQNLKEDIASHLSQLTSENQNLITYLKEKRYNVNIIVDNSYLQGAPVIEEDNPTFSNL
VGRIEYYSQMGLLQTDFTMIKSGAFHRANGGYLIMEAEKVLRKPYAWEVIKRFLSEKEVKIENIQTAEGYSSVESLEPEP
LSLTVKVILIGEEWVYNLLRVYDSEFEKLFPIKSQFDYEAELSNENLNKFLAFLSNTVEENDISHFTKDAIEEIIKYSCR
MNGNNKRFSLRLGEIKNLLIDSFNISRKNGSSPYITAKDIKDTTKFREKMFSFHKKKLFNAIKEQKIDIRTEGSEVGQIN
GLTVLDTGDFTFGHPVKITAKSYRSSSEKIINIHRDIDLSGKIYKKSSLIIENYFKHKFSSFIETGFGVSLNFEQVYSII
EGDSATIAETLALMSSIANIPLKQNIAITGSMNQNGEVLPVGGIIEKIEGFYDACKNLNFTGDQGVIIPSKNIDNIVLKD
EINEDIQNGKFHIWAIDNIDEGIELMTDYKAGTPNENGEYEEGTFYYYVSENLKKLSKEEKKEKDEKDNK
>Mature_790_residues
MKLTLSDFEIKIPDIKIDNTSEIKIGSYQDYTIQTDACEILQFALESSNDSNNVFLVGPNRSGRRGMTRKIIERISLTQK
APQDLMYVFNFKEEKKPKLLKLPAGEAKNFKSELQSIINSSVQVLNKTMQTEEFQQRLSSLEKEYNEQREKLWSDLRKQA
QALGFILEASEKGIVSVPVYDGKKISTSEFENLPEEIKEYFRKNSEKLRELIEKTMVKITEMDKEYWEEVKNLRRYWAAF
SLAKLFEPLEKKYLKYSDVFEYLQNLKEDIASHLSQLTSENQNLITYLKEKRYNVNIIVDNSYLQGAPVIEEDNPTFSNL
VGRIEYYSQMGLLQTDFTMIKSGAFHRANGGYLIMEAEKVLRKPYAWEVIKRFLSEKEVKIENIQTAEGYSSVESLEPEP
LSLTVKVILIGEEWVYNLLRVYDSEFEKLFPIKSQFDYEAELSNENLNKFLAFLSNTVEENDISHFTKDAIEEIIKYSCR
MNGNNKRFSLRLGEIKNLLIDSFNISRKNGSSPYITAKDIKDTTKFREKMFSFHKKKLFNAIKEQKIDIRTEGSEVGQIN
GLTVLDTGDFTFGHPVKITAKSYRSSSEKIINIHRDIDLSGKIYKKSSLIIENYFKHKFSSFIETGFGVSLNFEQVYSII
EGDSATIAETLALMSSIANIPLKQNIAITGSMNQNGEVLPVGGIIEKIEGFYDACKNLNFTGDQGVIIPSKNIDNIVLKD
EINEDIQNGKFHIWAIDNIDEGIELMTDYKAGTPNENGEYEEGTFYYYVSENLKKLSKEEKKEKDEKDNK

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=563, Percent_Identity=27.3534635879218, Blast_Score=207, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 91062; Mature: 91062

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLSDFEIKIPDIKIDNTSEIKIGSYQDYTIQTDACEILQFALESSNDSNNVFLVGPN
CEEEECCCEEECCCEEECCCCCEEECCCCCCEEECHHHHHHHHHHHCCCCCCEEEEECCC
RSGRRGMTRKIIERISLTQKAPQDLMYVFNFKEEKKPKLLKLPAGEAKNFKSELQSIINS
CCCCCCHHHHHHHHHHHHHCCCHHHEEHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH
SVQVLNKTMQTEEFQQRLSSLEKEYNEQREKLWSDLRKQAQALGFILEASEKGIVSVPVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECC
DGKKISTSEFENLPEEIKEYFRKNSEKLRELIEKTMVKITEMDKEYWEEVKNLRRYWAAF
CCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAKLFEPLEKKYLKYSDVFEYLQNLKEDIASHLSQLTSENQNLITYLKEKRYNVNIIVD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEE
NSYLQGAPVIEEDNPTFSNLVGRIEYYSQMGLLQTDFTMIKSGAFHRANGGYLIMEAEKV
CCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEEEECHHH
LRKPYAWEVIKRFLSEKEVKIENIQTAEGYSSVESLEPEPLSLTVKVILIGEEWVYNLLR
HHCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEECHHHHHHHHH
VYDSEFEKLFPIKSQFDYEAELSNENLNKFLAFLSNTVEENDISHFTKDAIEEIIKYSCR
HHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
MNGNNKRFSLRLGEIKNLLIDSFNISRKNGSSPYITAKDIKDTTKFREKMFSFHKKKLFN
CCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHH
AIKEQKIDIRTEGSEVGQINGLTVLDTGDFTFGHPVKITAKSYRSSSEKIINIHRDIDLS
HHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCC
GKIYKKSSLIIENYFKHKFSSFIETGFGVSLNFEQVYSIIEGDSATIAETLALMSSIANI
CCEEECHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PLKQNIAITGSMNQNGEVLPVGGIIEKIEGFYDACKNLNFTGDQGVIIPSKNIDNIVLKD
CCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEHH
EINEDIQNGKFHIWAIDNIDEGIELMTDYKAGTPNENGEYEEGTFYYYVSENLKKLSKEE
HHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
KKEKDEKDNK
HHHHHCCCCC
>Mature Secondary Structure
MKLTLSDFEIKIPDIKIDNTSEIKIGSYQDYTIQTDACEILQFALESSNDSNNVFLVGPN
CEEEECCCEEECCCEEECCCCCEEECCCCCCEEECHHHHHHHHHHHCCCCCCEEEEECCC
RSGRRGMTRKIIERISLTQKAPQDLMYVFNFKEEKKPKLLKLPAGEAKNFKSELQSIINS
CCCCCCHHHHHHHHHHHHHCCCHHHEEHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH
SVQVLNKTMQTEEFQQRLSSLEKEYNEQREKLWSDLRKQAQALGFILEASEKGIVSVPVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECC
DGKKISTSEFENLPEEIKEYFRKNSEKLRELIEKTMVKITEMDKEYWEEVKNLRRYWAAF
CCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAKLFEPLEKKYLKYSDVFEYLQNLKEDIASHLSQLTSENQNLITYLKEKRYNVNIIVD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEE
NSYLQGAPVIEEDNPTFSNLVGRIEYYSQMGLLQTDFTMIKSGAFHRANGGYLIMEAEKV
CCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCEEEEECHHH
LRKPYAWEVIKRFLSEKEVKIENIQTAEGYSSVESLEPEPLSLTVKVILIGEEWVYNLLR
HHCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEECHHHHHHHHH
VYDSEFEKLFPIKSQFDYEAELSNENLNKFLAFLSNTVEENDISHFTKDAIEEIIKYSCR
HHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
MNGNNKRFSLRLGEIKNLLIDSFNISRKNGSSPYITAKDIKDTTKFREKMFSFHKKKLFN
CCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHH
AIKEQKIDIRTEGSEVGQINGLTVLDTGDFTFGHPVKITAKSYRSSSEKIINIHRDIDLS
HHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCC
GKIYKKSSLIIENYFKHKFSSFIETGFGVSLNFEQVYSIIEGDSATIAETLALMSSIANI
CCEEECHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PLKQNIAITGSMNQNGEVLPVGGIIEKIEGFYDACKNLNFTGDQGVIIPSKNIDNIVLKD
CCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEHH
EINEDIQNGKFHIWAIDNIDEGIELMTDYKAGTPNENGEYEEGTFYYYVSENLKKLSKEE
HHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
KKEKDEKDNK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]