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The map label for this gene is bfrD [H]

Identifier: 160877605

GI number: 160877605

Start: 5326720

End: 5328831

Strand: Reverse

Name: bfrD [H]

Synonym: Sbal195_4504

Alternate gene names: 160877605

Gene position: 5328831-5326720 (Counterclockwise)

Preceding gene: 160877606

Following gene: 160877604

Centisome position: 99.65

GC content: 44.46

Gene sequence:

>2112_bases
ATGGTATTTAAATATTCAGTTTTAGGTTTGGCCGTAGGTTCGGCATTAATGGCTATGCCAGTGTTGGCAGAGGTGGCTAG
CGACGCAAATATCGAGCGCATTAATGTTACTGGCCGCACTTTTAACGATTATAAAGTGGGTACAGCATCAGGCGCCATGC
GCGGTGATATTGACTTAATGGATACCCCACAATCAGTTAATGTGATCCCCGATTTTGTCACGGACGAACAGCTGGCGACT
AACCTCGCTGAAGTGTTAGTTAACGATTCGAGCGTGACGGCAGGAACGGCACGCTGGAACCGCCAAGTTTTTAGCATCCG
TGGCTTCGAGTTAGATTCTGGTAATGGTTATCTCATCAATGGCCATCAGCAATGGTCCCATTACGTACAACCCATCGAAA
CCCTGCAGCAAGTTGAAGTGTTAAAAGGCCCTTCGAGCATGTTGTATGGTCAATCTGGCCCTGGTGGTTTAGTGAATATG
GTCACTAAGAAACCAACCTATGATTCAATGCTTAACTTAGGTTTTGATACCGATGGCTACGGTTCTACCCGTGCACAGCT
CGATGCGGGTGGCAGTTTAAACGAAGCACAAAGTATTCGTTATCGCGGTGTGTTAGTGAAGCAAGATACAAAATACTGGC
GTGAGTATTCCGCTAATGATGAGAACCAAGAGCGCGATCGCTGGTTAGGTTATCTCAATATGGAATTTGACCTAAGCGAC
GATTTGTTACTGTCGGTTAAATACGACCATACCCAAGATAAAGCAGGTATCGATGCGGGTGGGTGGTTAGATAAACAAGG
TAATGTCATTGGCGAACGTAAAACCGTTTGGGATGCGCCTTGGGCCTTTACTGACAATACAGTGTCAAACTTAGGTGCCG
ATCTGACTTGGCATATGAGTGACAACTGGAAAGTCAAAGCGGGTTATAACGAGCAGCAGTTTAATCGCCAACGTTTTGAT
TCTGCGCCGCAATATACAGAAGACCCATTCACCAAAGGCTATAGTATCAAGCCATTCGATCGTTACGACGATTGGCAGCA
TAAAACCGCTTATGCCGATTTCACCGGTGAATTTGGATTGGCGGGAATGCAGCATCAACTGCTGATTGGGGCTAACTATC
TCGATTATTTCTATCAGCAACAAATTCACCGTGGGGCAGCTCAAACGGTTATTCCTGGGCAACCAGTTATTCAACCTGCT
CTCGATTACCACACAAAACCCAAAGGCAATGCGAGTACCTATAAGTATTACGGTTTCTACCTGCAGGATTTAATGACGCT
TAACGAACAATGGAAGTTGCTCGCTGGCGTACGTTACGACGAACAGAAGAAAGACGGTGAAGGTGAAAACAGCTATGCCG
TGTCGCCTAAGTTTGGGGTGATTTACTCGCCTATGACTAATGGCAGCGTTTACGTTAATTACTCAAAGAGCTTCACGCCA
AAAGGTACTGTGAATAACGAGTATGATGTAAATAATAAGCTTAATTTAAAGCCAGAATACGGTATTCAATATGAAGTGGG
CACTAAGTGGGAATTGTTTGACGATAGTCTGTTATTAACCGCTGCAGTGTTCGATATTACACTTGAGAACATCACTATTT
CAGAAAAGTTATCCTCACCAATAGGTGATTTTACTGATATCACCACTCAAGGTGGCGAACAGAAGCACCGTGGCTTTGAA
GTTGGTGCCCAAGGTCAGTTAGGCGATAGCTGGTTTGTGACTTCTTCTATGATGTATTTAGATGCCGAATATAAAACGGG
TGCTGGCAAGATAGATGGGAAAATCTTAGATGGTAAAACACCTGTCGATGCGCCTGAATGGTCGGCGAATATCTGGACCC
GTTATGAAGTGACAGACAATTTTGCGATGAACTTTGGTGCCATTTATGTGGGTGAGCGCTTCGCCGATAAAGATAACAGC
ATTACTAAAGACGGCTATGTGCGTTTCGATATAGGTGCAGCCTACACTATGGATATCATGGGTAAAGATGTGAGCCTTCG
TGCCAACGTTAGAAATCTATTTGATACTGATTATATTGATGGTGGTCAGTACAATATGGTCACTATCGGCCAAGGCCGTA
ACTTTAGTGTTGCTGTTGAAGCTAAGTTCTAA

Upstream 100 bases:

>100_bases
ACAGCTAATTGTAAATTCGTGTAAAGAAGATTAAATAAAAACACTTCTCATTTATATTGCCTGCAATTCTAAGACGAAAG
GTCTAATTGAGGTGTTGGCA

Downstream 100 bases:

>100_bases
ATTTATTAGGTTTTAAATTCATTTAAAGCCGCTTGTCCTTAAAGGATAAGCGGCTTTTTTTATTGGCTGATGTTTAAGTT
CACTATTACAGAACGATAAA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MVFKYSVLGLAVGSALMAMPVLAEVASDANIERINVTGRTFNDYKVGTASGAMRGDIDLMDTPQSVNVIPDFVTDEQLAT
NLAEVLVNDSSVTAGTARWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNM
VTKKPTYDSMLNLGFDTDGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNMEFDLSD
DLLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWHMSDNWKVKAGYNEQQFNRQRFD
SAPQYTEDPFTKGYSIKPFDRYDDWQHKTAYADFTGEFGLAGMQHQLLIGANYLDYFYQQQIHRGAAQTVIPGQPVIQPA
LDYHTKPKGNASTYKYYGFYLQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMTNGSVYVNYSKSFTP
KGTVNNEYDVNNKLNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDITLENITISEKLSSPIGDFTDITTQGGEQKHRGFE
VGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILDGKTPVDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNS
ITKDGYVRFDIGAAYTMDIMGKDVSLRANVRNLFDTDYIDGGQYNMVTIGQGRNFSVAVEAKF

Sequences:

>Translated_703_residues
MVFKYSVLGLAVGSALMAMPVLAEVASDANIERINVTGRTFNDYKVGTASGAMRGDIDLMDTPQSVNVIPDFVTDEQLAT
NLAEVLVNDSSVTAGTARWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNM
VTKKPTYDSMLNLGFDTDGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNMEFDLSD
DLLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWHMSDNWKVKAGYNEQQFNRQRFD
SAPQYTEDPFTKGYSIKPFDRYDDWQHKTAYADFTGEFGLAGMQHQLLIGANYLDYFYQQQIHRGAAQTVIPGQPVIQPA
LDYHTKPKGNASTYKYYGFYLQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMTNGSVYVNYSKSFTP
KGTVNNEYDVNNKLNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDITLENITISEKLSSPIGDFTDITTQGGEQKHRGFE
VGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILDGKTPVDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNS
ITKDGYVRFDIGAAYTMDIMGKDVSLRANVRNLFDTDYIDGGQYNMVTIGQGRNFSVAVEAKF
>Mature_703_residues
MVFKYSVLGLAVGSALMAMPVLAEVASDANIERINVTGRTFNDYKVGTASGAMRGDIDLMDTPQSVNVIPDFVTDEQLAT
NLAEVLVNDSSVTAGTARWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNM
VTKKPTYDSMLNLGFDTDGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNMEFDLSD
DLLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWHMSDNWKVKAGYNEQQFNRQRFD
SAPQYTEDPFTKGYSIKPFDRYDDWQHKTAYADFTGEFGLAGMQHQLLIGANYLDYFYQQQIHRGAAQTVIPGQPVIQPA
LDYHTKPKGNASTYKYYGFYLQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMTNGSVYVNYSKSFTP
KGTVNNEYDVNNKLNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDITLENITISEKLSSPIGDFTDITTQGGEQKHRGFE
VGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILDGKTPVDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNS
ITKDGYVRFDIGAAYTMDIMGKDVSLRANVRNLFDTDYIDGGQYNMVTIGQGRNFSVAVEAKF

Specific function: Probably involved in iron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=752, Percent_Identity=25.7978723404255, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI1787344, Length=745, Percent_Identity=22.8187919463087, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787024, Length=380, Percent_Identity=24.2105263157895, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 78734; Mature: 78734

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKYSVLGLAVGSALMAMPVLAEVASDANIERINVTGRTFNDYKVGTASGAMRGDIDLM
CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEE
DTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVTAGTARWNRQVFSIRGFELDSGNGYLIN
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCHHCCCEEEEEEEEEEECCCEEEEE
GHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLNLGFDTDGY
CHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEEEEECCCCHHHHHCCCCCCCCC
GSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNMEFDLSD
CCCEEEECCCCCCCHHHHEEEEEEEEECCHHHHHHCCCCCCCCCHHHEEEEEEEEEECCC
DLLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWHMS
CEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCHHHCCCCEEEEEC
DNWKVKAGYNEQQFNRQRFDSAPQYTEDPFTKGYSIKPFDRYDDWQHKTAYADFTGEFGL
CCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
AGMQHQLLIGANYLDYFYQQQIHRGAAQTVIPGQPVIQPALDYHTKPKGNASTYKYYGFY
CCCCEEEEEECHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCCCCEEEEHHHH
LQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMTNGSVYVNYSKSFTP
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCCCCC
KGTVNNEYDVNNKLNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDITLENITISEKLSSP
CCCCCCCCCCCCEEECCCCCCEEEECCCEEEECCCCCEEEEEEEEEEEECEEEHHHHCCC
IGDFTDITTQGGEQKHRGFEVGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILDGKT
CCCCHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCC
PVDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNSITKDGYVRFDIGAAYTMDIM
CCCCCCCCCCEEEEEEECCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC
GKDVSLRANVRNLFDTDYIDGGQYNMVTIGQGRNFSVAVEAKF
CCCEEEEECHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MVFKYSVLGLAVGSALMAMPVLAEVASDANIERINVTGRTFNDYKVGTASGAMRGDIDLM
CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEE
DTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVTAGTARWNRQVFSIRGFELDSGNGYLIN
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCHHCCCEEEEEEEEEEECCCEEEEE
GHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLNLGFDTDGY
CHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCEEEEEECCCCHHHHHCCCCCCCCC
GSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSANDENQERDRWLGYLNMEFDLSD
CCCEEEECCCCCCCHHHHEEEEEEEEECCHHHHHHCCCCCCCCCHHHEEEEEEEEEECCC
DLLLSVKYDHTQDKAGIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWHMS
CEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCHHHCCCCEEEEEC
DNWKVKAGYNEQQFNRQRFDSAPQYTEDPFTKGYSIKPFDRYDDWQHKTAYADFTGEFGL
CCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
AGMQHQLLIGANYLDYFYQQQIHRGAAQTVIPGQPVIQPALDYHTKPKGNASTYKYYGFY
CCCCEEEEEECHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCCCCEEEEHHHH
LQDLMTLNEQWKLLAGVRYDEQKKDGEGENSYAVSPKFGVIYSPMTNGSVYVNYSKSFTP
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCCCCC
KGTVNNEYDVNNKLNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDITLENITISEKLSSP
CCCCCCCCCCCCEEECCCCCCEEEECCCEEEECCCCCEEEEEEEEEEEECEEEHHHHCCC
IGDFTDITTQGGEQKHRGFEVGAQGQLGDSWFVTSSMMYLDAEYKTGAGKIDGKILDGKT
CCCCHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCC
PVDAPEWSANIWTRYEVTDNFAMNFGAIYVGERFADKDNSITKDGYVRFDIGAAYTMDIM
CCCCCCCCCCEEEEEEECCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC
GKDVSLRANVRNLFDTDYIDGGQYNMVTIGQGRNFSVAVEAKF
CCCEEEEECHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]