Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877544
Identifier: 160877544
GI number: 160877544
Start: 5251638
End: 5252273
Strand: Reverse
Name: 160877544
Synonym: Sbal195_4443
Alternate gene names: NA
Gene position: 5252273-5251638 (Counterclockwise)
Preceding gene: 160877545
Following gene: 160877539
Centisome position: 98.22
GC content: 47.33
Gene sequence:
>636_bases ATGCACAGTGCTATGAAATCATTATTTCCTATTTTTATCATTCTCTTATCTTTGGCTTTATTAATCCCTGGGGTGACTCA ACCTATTTTGAGTATCAGCGGCACTATCGATAAGGCCAAGCTGACCGAGCAGGGCATAGAGCAAGTTGCTCAACGTTTCG ATGAAGACTCGGGGCGCGACAGCGCTCGCGGTATGCTGAGTATGGTCAGTGGTTTGCTTGGGCTCAATAGCCTTAAGGGC GAAGTCGAAGTGCTACAGAAAACTCGCAGTATTTGGGGAACGGTAACCGAACTTTATCACTCTGGGAATGGGCTCGTCGC GGGATTAGTCATGTTATTCAGCGTGGTAGTGCCGGCCTTGAAGTTGAGTTTAATGCTGGCACAGCAATGTGTGAGTTCGA TTGGTCTGAAACTGAGGATTAATGCCGTCGTCAATGCACTCGCTAAGTGGTCGATGGCCGATGTGTTTGTGGTGGCGCTG ATCATCACCTTTATGGCGGGGAACGCCTCTGGTGGTATGGGGGAAATGCTAAAAACACAGGCGCAATTTGAAAATGGATT TTACTTCTTTACCGCGTACTGCATTTTATCGATATTGAGTGGTTTTTTAGTGCGGCGTCCAACGCCAATTTTGTAG
Upstream 100 bases:
>100_bases GTCTCTAATGCCGGTCATCTAAGTCGATGGCTGGTGCGAACGATTGCAGAGCCTGCGCTAAAAACCGTAAACTGAATGTC TTCTCCAGTCTGGCAATGCG
Downstream 100 bases:
>100_bases CGAGTTTATAAGGCATGCCGACCTTAGCGATAAGGTCGGATGCCTAGATTTAACCGCGCAGTGAGTTAGGACAAAGTGCC ATTTTGATAAATGGGCATAA
Product: paraquat-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MHSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQGIEQVAQRFDEDSGRDSARGMLSMVSGLLGLNSLKG EVEVLQKTRSIWGTVTELYHSGNGLVAGLVMLFSVVVPALKLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVAL IITFMAGNASGGMGEMLKTQAQFENGFYFFTAYCILSILSGFLVRRPTPIL
Sequences:
>Translated_211_residues MHSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQGIEQVAQRFDEDSGRDSARGMLSMVSGLLGLNSLKG EVEVLQKTRSIWGTVTELYHSGNGLVAGLVMLFSVVVPALKLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVAL IITFMAGNASGGMGEMLKTQAQFENGFYFFTAYCILSILSGFLVRRPTPIL >Mature_211_residues MHSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQGIEQVAQRFDEDSGRDSARGMLSMVSGLLGLNSLKG EVEVLQKTRSIWGTVTELYHSGNGLVAGLVMLFSVVVPALKLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVAL IITFMAGNASGGMGEMLKTQAQFENGFYFFTAYCILSILSGFLVRRPTPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22715; Mature: 22715
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQGIEQVAQRFDEDSGRD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH SARGMLSMVSGLLGLNSLKGEVEVLQKTRSIWGTVTELYHSGNGLVAGLVMLFSVVVPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVALIITFMAGNASGGMGEMLKTQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AQFENGFYFFTAYCILSILSGFLVRRPTPIL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHSAMKSLFPIFIILLSLALLIPGVTQPILSISGTIDKAKLTEQGIEQVAQRFDEDSGRD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH SARGMLSMVSGLLGLNSLKGEVEVLQKTRSIWGTVTELYHSGNGLVAGLVMLFSVVVPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KLSLMLAQQCVSSIGLKLRINAVVNALAKWSMADVFVVALIITFMAGNASGGMGEMLKTQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AQFENGFYFFTAYCILSILSGFLVRRPTPIL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA