Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877481
Identifier: 160877481
GI number: 160877481
Start: 5175196
End: 5176233
Strand: Reverse
Name: 160877481
Synonym: Sbal195_4379
Alternate gene names: NA
Gene position: 5176233-5175196 (Counterclockwise)
Preceding gene: 160877482
Following gene: 160877480
Centisome position: 96.8
GC content: 44.41
Gene sequence:
>1038_bases ATGAATATTTTCACCTTTATTTTAGGTAGCCCGATTCGGACTTATCGGGGTCATGTTGGTTTGTCCGCGGATTTGGATGA ACTCCCTCAACTCGAAGCGTATTACGAAGAACACCTAGCCCCCATTAGTCGTAAATATGAAACTAAGCGCGTGGCCTGTC TTAAGGCGGCGCGTAAACGTTTATATTTGAGTTTGATGATAGTACTTGGGTTGACCTTGCTGACTGTGATTGGCTATTAC AGCGGCGTTGCTTATTTTCCTCCTTTACCCTTGCTTGCCTTAGTTGGGTTGAGCTGGTGGAGCTTTGCGCCGACTCGAGA TTTTAAGCATTTGGTTCAACGGGATATTTATCCACGGATGTTTAAATATTTCGGAGATGATTTTGTTTATAGCCGCGAAA TGCGCCTCGATATGAATAGACTCGTTGCGGCTAAGGTATTGCCGCAATACGATAAAGTCAGTTTCGGTGACTATATTCAA GGTCGCTATAAAGGCGTTGAGTTGACGGTCAATGAACTCACCTTGACCAGAAATGTGCAAGTCGAAGAGCTGGATGCCAG CACCAATAGGCGCAGAACCGTTACCCGCACCGAAACCCAGTTTAGTGGCTTAGTGGTTGAGCTGAGTAGCCATAAAGCGT TTATCGGCCACACTGTGGTGCTGAGGGATCGCGGTGGTTTAGCTAATTTCTTGTCTGACCGCCATGCTGGACTGGTGCGA GTGAAACTTGAAGATCCGCAATTCGAAAAAGAGTTTGATGTGTTTTCAACGGATCAAGTGGAGTCTCGCTATTTGCTCAA TACGGCATTTATGGAGCGCTTACAGGAACTTGCTAAGCATTTTGGCGGAAATATTCAATGTGCTTTCTTTCGTAACAAGT TGATTATGTTTCTACCAAATCGCAAAACGCGTTTTCAAGTGCAGTCCATTTTTAATGGCGCGACCTTTTCAGCAGAATTT AGTCAGATAAACCGAGAGATGAAGCAACTCTTTGCTATTATTGAAGTACTTAAACTTAATCAGCACACGGGACTTTGA
Upstream 100 bases:
>100_bases GAGGTAAGCGAAGCGGCAAAAGCGCCCGTAGATGCGGCCGAATACTTGTAAGCTTAGTATTGCAGGGTGAGTTATCACCC TGCAATACTATGATATCAAT
Downstream 100 bases:
>100_bases TGTTGCTCACTCGCTCAGCACCGACTCGTACACAGATGACTGCGGCCTTTTTATCGCCTCGCCGCCTTGTCGTGTTGGGT CTGTGTTTATGGCTGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MNIFTFILGSPIRTYRGHVGLSADLDELPQLEAYYEEHLAPISRKYETKRVACLKAARKRLYLSLMIVLGLTLLTVIGYY SGVAYFPPLPLLALVGLSWWSFAPTRDFKHLVQRDIYPRMFKYFGDDFVYSREMRLDMNRLVAAKVLPQYDKVSFGDYIQ GRYKGVELTVNELTLTRNVQVEELDASTNRRRTVTRTETQFSGLVVELSSHKAFIGHTVVLRDRGGLANFLSDRHAGLVR VKLEDPQFEKEFDVFSTDQVESRYLLNTAFMERLQELAKHFGGNIQCAFFRNKLIMFLPNRKTRFQVQSIFNGATFSAEF SQINREMKQLFAIIEVLKLNQHTGL
Sequences:
>Translated_345_residues MNIFTFILGSPIRTYRGHVGLSADLDELPQLEAYYEEHLAPISRKYETKRVACLKAARKRLYLSLMIVLGLTLLTVIGYY SGVAYFPPLPLLALVGLSWWSFAPTRDFKHLVQRDIYPRMFKYFGDDFVYSREMRLDMNRLVAAKVLPQYDKVSFGDYIQ GRYKGVELTVNELTLTRNVQVEELDASTNRRRTVTRTETQFSGLVVELSSHKAFIGHTVVLRDRGGLANFLSDRHAGLVR VKLEDPQFEKEFDVFSTDQVESRYLLNTAFMERLQELAKHFGGNIQCAFFRNKLIMFLPNRKTRFQVQSIFNGATFSAEF SQINREMKQLFAIIEVLKLNQHTGL >Mature_345_residues MNIFTFILGSPIRTYRGHVGLSADLDELPQLEAYYEEHLAPISRKYETKRVACLKAARKRLYLSLMIVLGLTLLTVIGYY SGVAYFPPLPLLALVGLSWWSFAPTRDFKHLVQRDIYPRMFKYFGDDFVYSREMRLDMNRLVAAKVLPQYDKVSFGDYIQ GRYKGVELTVNELTLTRNVQVEELDASTNRRRTVTRTETQFSGLVVELSSHKAFIGHTVVLRDRGGLANFLSDRHAGLVR VKLEDPQFEKEFDVFSTDQVESRYLLNTAFMERLQELAKHFGGNIQCAFFRNKLIMFLPNRKTRFQVQSIFNGATFSAEF SQINREMKQLFAIIEVLKLNQHTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39899; Mature: 39899
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFTFILGSPIRTYRGHVGLSADLDELPQLEAYYEEHLAPISRKYETKRVACLKAARKR CCEEEEECCCCHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLSLMIVLGLTLLTVIGYYSGVAYFPPLPLLALVGLSWWSFAPTRDFKHLVQRDIYPRM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH FKYFGDDFVYSREMRLDMNRLVAAKVLPQYDKVSFGDYIQGRYKGVELTVNELTLTRNVQ HHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEEEEEEEECCE VEELDASTNRRRTVTRTETQFSGLVVELSSHKAFIGHTVVLRDRGGLANFLSDRHAGLVR EEECCCCCCCCEEEEECHHHHCCEEEEECCCCEEEEEEEEEECCCCHHHHHCCCCCCEEE VKLEDPQFEKEFDVFSTDQVESRYLLNTAFMERLQELAKHFGGNIQCAFFRNKLIMFLPN EEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECC RKTRFQVQSIFNGATFSAEFSQINREMKQLFAIIEVLKLNQHTGL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNIFTFILGSPIRTYRGHVGLSADLDELPQLEAYYEEHLAPISRKYETKRVACLKAARKR CCEEEEECCCCHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLSLMIVLGLTLLTVIGYYSGVAYFPPLPLLALVGLSWWSFAPTRDFKHLVQRDIYPRM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH FKYFGDDFVYSREMRLDMNRLVAAKVLPQYDKVSFGDYIQGRYKGVELTVNELTLTRNVQ HHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEEEEEEEECCE VEELDASTNRRRTVTRTETQFSGLVVELSSHKAFIGHTVVLRDRGGLANFLSDRHAGLVR EEECCCCCCCCEEEEECHHHHCCEEEEECCCCEEEEEEEEEECCCCHHHHHCCCCCCEEE VKLEDPQFEKEFDVFSTDQVESRYLLNTAFMERLQELAKHFGGNIQCAFFRNKLIMFLPN EEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECC RKTRFQVQSIFNGATFSAEFSQINREMKQLFAIIEVLKLNQHTGL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA