| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877471
Identifier: 160877471
GI number: 160877471
Start: 5165384
End: 5167063
Strand: Direct
Name: 160877471
Synonym: Sbal195_4369
Alternate gene names: NA
Gene position: 5165384-5167063 (Clockwise)
Preceding gene: 160877470
Following gene: 160877472
Centisome position: 96.6
GC content: 48.15
Gene sequence:
>1680_bases ATGAAAGATGGATTCCGTACTCGGATGAGTCTCCTGCACACTTGGGCAGGATTAATGTTAAGCGGCTTGCTGTTCGCCAT TTTCTGGACCGGCACGCTGTCAGTATTCGATAAAGAAATCGATCGCTGGATGATGCCACACACTCGAATCCACATGGATA CAGCAAGGCCATTATCGGTAGACCGCGAGATTATACCTTTACTGGCAGAGCGAGCTGAGGGGGCAAAAGCTTGGACTATA GTGCTACCCGCTGAGCGCAGACCTTTTTTGACATTGGCTTATGATTCTGCAAAGTCACACATAGCACAGCGAAATAGTTT CCACCCGATCACGCTCGAACCGCTTCCGGCTCCAAACACCCGAGGAGCGAGTAACTTTATTTACCCCTTCCATCACAATT TAACCTTACGCCAAAACAACATTGGCGCCCTACTGGTTGGTATTGCGAGCATGGGTATGCTTTGCCTGTTAATTTCCGGC ATAGTCATACACCGTAGAATATTTGCCGATTTCTTTACCCTTAGGCTGCTTCGTGGCTTTGGCAGAGCCAATCTCGATAT TCATAACCTCACAGGCGTTGTGCTGCTGCCTTTCACTATCGTCATCACCTTGTCTGGGCTAATGATTGCGCACTTGATCT ATTTCCCCAAGGCGCCCGATGCCGTTTTCGCACAGCTCAACCCACCATCCGTGACGCAGGAACGACCCAAATCCAAAGTA AGAGAAGCTTCACGCAAACGTGAGCAAGATGTTAGCAGTGAAAATGAAGACGAAATTACCGATGCCAGAGAAGGTTCACG CAATAGTCCTGCACGGAGCCGTTTTATCGCCGAATCACAGGGGCGTGTTAGACCACAAGCAATAGGCCAACCCGCCAATG TTGTCGCAATTGATCCTATGATTGCGGCGACCGAAAACGAACTAGGTCAAGGGGCTGTCTATATGATTCGGGTTAGCAAT CCTGGAGATGCAGGTGGTGTCGTCGCACTCAGGCTAAATGGCGATAACAGCGTATCTCAGAATATTGATAATAGGAGATT TTCTACCGCCACTGGAGAGGAACTAGCACATTTCAACTCATCCTCGACGACCAATGTATTTAACTTTATTGCTGGTATGC ATTACATCAAATTTAAACACTGGCCACTGCGCTGGCTTTATTTTATCGCAGGGCTGGGTGCTTGCGCGTTAATCGCCACT GGCCTACTGCATTGGACTCAGGCACGTAACCAAAAGCAAGGCAGCACTGGCTTCAATGTGTCTTTTATGAATGCACATAA CATCGCTGCGATCACTGGCATTATTTCTGCGACCGGGGCTTTTTTAGTGATCAATCGCTTGCTCAATAATAGAGAACAAT TTGCAGGTATCTCCAGCCGCGATTTAGAGGTATATGCCTTCTTTGGTGTATGGCTAGCTTGCTTACTTCATGCGTTGATC AGAGTATTTTTGAACAAACAGCATGGTTACCGAAAGGCTTGGGCAGAACAATGCTGGGCGATTGCTCTGATTGCTATCGC AGCTGTGGGACTGAACTGGATAACCACAGGCGACCATCTGCTTAAGACCCTATTCACCCATACCTATTGGCCCGTTGCGA CCCTAGACTTAGTGCTTGTTACTAGTGCAGTGATGGCCATTTACGCAGCGCGGAAACTATCCGTTATCCGTGAGAGTTAG
Upstream 100 bases:
>100_bases TGTGGGCATTTTCCCGTAACGGCGTCCTGCGAACTTGGCTGAATGTAAGCAGCCTGACTGGCCTCTCCATCTTCATGGCT TGGATAATTGGAGCATTAGT
Downstream 100 bases:
>100_bases ATGTTAAAAGGAGAGGATTAATGCCTAAAGACCTGCTGTTAGTCGCCATATTTAGCACGGCCTACCTCAGCTTTTCTTTG TTCGCCCTGAGCCAAGTACG
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Aspartate Kinase; PepSY-Associated Membrane Protein; Iron Uptake Protein; PepSY-Associated TM Helix Family Protein; Iron-Regulated Membrane Protein DUF; Transmembrane Protein; Transmembrane PepSY Domain-Containing Protein; PepSY Domain Protein; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKDGFRTRMSLLHTWAGLMLSGLLFAIFWTGTLSVFDKEIDRWMMPHTRIHMDTARPLSVDREIIPLLAERAEGAKAWTI VLPAERRPFLTLAYDSAKSHIAQRNSFHPITLEPLPAPNTRGASNFIYPFHHNLTLRQNNIGALLVGIASMGMLCLLISG IVIHRRIFADFFTLRLLRGFGRANLDIHNLTGVVLLPFTIVITLSGLMIAHLIYFPKAPDAVFAQLNPPSVTQERPKSKV REASRKREQDVSSENEDEITDAREGSRNSPARSRFIAESQGRVRPQAIGQPANVVAIDPMIAATENELGQGAVYMIRVSN PGDAGGVVALRLNGDNSVSQNIDNRRFSTATGEELAHFNSSSTTNVFNFIAGMHYIKFKHWPLRWLYFIAGLGACALIAT GLLHWTQARNQKQGSTGFNVSFMNAHNIAAITGIISATGAFLVINRLLNNREQFAGISSRDLEVYAFFGVWLACLLHALI RVFLNKQHGYRKAWAEQCWAIALIAIAAVGLNWITTGDHLLKTLFTHTYWPVATLDLVLVTSAVMAIYAARKLSVIRES
Sequences:
>Translated_559_residues MKDGFRTRMSLLHTWAGLMLSGLLFAIFWTGTLSVFDKEIDRWMMPHTRIHMDTARPLSVDREIIPLLAERAEGAKAWTI VLPAERRPFLTLAYDSAKSHIAQRNSFHPITLEPLPAPNTRGASNFIYPFHHNLTLRQNNIGALLVGIASMGMLCLLISG IVIHRRIFADFFTLRLLRGFGRANLDIHNLTGVVLLPFTIVITLSGLMIAHLIYFPKAPDAVFAQLNPPSVTQERPKSKV REASRKREQDVSSENEDEITDAREGSRNSPARSRFIAESQGRVRPQAIGQPANVVAIDPMIAATENELGQGAVYMIRVSN PGDAGGVVALRLNGDNSVSQNIDNRRFSTATGEELAHFNSSSTTNVFNFIAGMHYIKFKHWPLRWLYFIAGLGACALIAT GLLHWTQARNQKQGSTGFNVSFMNAHNIAAITGIISATGAFLVINRLLNNREQFAGISSRDLEVYAFFGVWLACLLHALI RVFLNKQHGYRKAWAEQCWAIALIAIAAVGLNWITTGDHLLKTLFTHTYWPVATLDLVLVTSAVMAIYAARKLSVIRES >Mature_559_residues MKDGFRTRMSLLHTWAGLMLSGLLFAIFWTGTLSVFDKEIDRWMMPHTRIHMDTARPLSVDREIIPLLAERAEGAKAWTI VLPAERRPFLTLAYDSAKSHIAQRNSFHPITLEPLPAPNTRGASNFIYPFHHNLTLRQNNIGALLVGIASMGMLCLLISG IVIHRRIFADFFTLRLLRGFGRANLDIHNLTGVVLLPFTIVITLSGLMIAHLIYFPKAPDAVFAQLNPPSVTQERPKSKV REASRKREQDVSSENEDEITDAREGSRNSPARSRFIAESQGRVRPQAIGQPANVVAIDPMIAATENELGQGAVYMIRVSN PGDAGGVVALRLNGDNSVSQNIDNRRFSTATGEELAHFNSSSTTNVFNFIAGMHYIKFKHWPLRWLYFIAGLGACALIAT GLLHWTQARNQKQGSTGFNVSFMNAHNIAAITGIISATGAFLVINRLLNNREQFAGISSRDLEVYAFFGVWLACLLHALI RVFLNKQHGYRKAWAEQCWAIALIAIAAVGLNWITTGDHLLKTLFTHTYWPVATLDLVLVTSAVMAIYAARKLSVIRES
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62117; Mature: 62117
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDGFRTRMSLLHTWAGLMLSGLLFAIFWTGTLSVFDKEIDRWMMPHTRIHMDTARPLSV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC DREIIPLLAERAEGAKAWTIVLPAERRPFLTLAYDSAKSHIAQRNSFHPITLEPLPAPNT CHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCEEECCCCCCCC RGASNFIYPFHHNLTLRQNNIGALLVGIASMGMLCLLISGIVIHRRIFADFFTLRLLRGF CCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRANLDIHNLTGVVLLPFTIVITLSGLMIAHLIYFPKAPDAVFAQLNPPSVTQERPKSKV CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH REASRKREQDVSSENEDEITDAREGSRNSPARSRFIAESQGRVRPQAIGQPANVVAIDPM HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCCCCCEEEECCE IAATENELGQGAVYMIRVSNPGDAGGVVALRLNGDNSVSQNIDNRRFSTATGEELAHFNS EECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHCCC SSTTNVFNFIAGMHYIKFKHWPLRWLYFIAGLGACALIATGLLHWTQARNQKQGSTGFNV CCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE SFMNAHNIAAITGIISATGAFLVINRLLNNREQFAGISSRDLEVYAFFGVWLACLLHALI EEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH RVFLNKQHGYRKAWAEQCWAIALIAIAAVGLNWITTGDHLLKTLFTHTYWPVATLDLVLV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCHHHHHHHHHH TSAVMAIYAARKLSVIRES HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDGFRTRMSLLHTWAGLMLSGLLFAIFWTGTLSVFDKEIDRWMMPHTRIHMDTARPLSV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC DREIIPLLAERAEGAKAWTIVLPAERRPFLTLAYDSAKSHIAQRNSFHPITLEPLPAPNT CHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCEEECCCCCCCC RGASNFIYPFHHNLTLRQNNIGALLVGIASMGMLCLLISGIVIHRRIFADFFTLRLLRGF CCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRANLDIHNLTGVVLLPFTIVITLSGLMIAHLIYFPKAPDAVFAQLNPPSVTQERPKSKV CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH REASRKREQDVSSENEDEITDAREGSRNSPARSRFIAESQGRVRPQAIGQPANVVAIDPM HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCCCCCEEEECCE IAATENELGQGAVYMIRVSNPGDAGGVVALRLNGDNSVSQNIDNRRFSTATGEELAHFNS EECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHCCC SSTTNVFNFIAGMHYIKFKHWPLRWLYFIAGLGACALIATGLLHWTQARNQKQGSTGFNV CCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE SFMNAHNIAAITGIISATGAFLVINRLLNNREQFAGISSRDLEVYAFFGVWLACLLHALI EEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH RVFLNKQHGYRKAWAEQCWAIALIAIAAVGLNWITTGDHLLKTLFTHTYWPVATLDLVLV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCHHHHHHHHHH TSAVMAIYAARKLSVIRES HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA