| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877444
Identifier: 160877444
GI number: 160877444
Start: 5132479
End: 5133435
Strand: Reverse
Name: 160877444
Synonym: Sbal195_4342
Alternate gene names: NA
Gene position: 5133435-5132479 (Counterclockwise)
Preceding gene: 160877449
Following gene: 160877443
Centisome position: 96.0
GC content: 52.14
Gene sequence:
>957_bases ATGAGCACACTCAATAAACAAGGTATGGCAGCCACAGTTAACAGTCAGGTTAACACCCATTTCGTTAAAGCGACGGCCAT TGCCGCGCTGTTTTTAGCGTCCACTGCCGTCAGCGCTCAGCCCCGCGAACTGGAATCATCGCAAAGCTTAACGCCATTTA CTGCGGCCAGTGTCGGCATTGCCAAAAAAGCTGAAAACAGCGAGCAAGCAGCCGAGCAGGAACAGCAAGCTTTAGCCCTG TTACAACAAGCTGCGCCCGCAAAAAATGTCACTGAAGCCGCTGCTGCAGCCGTTAAATCCTTGGCGCCCGCGTTATCCTC TAAAGCGCCGACGGCAAACCGCGTGCAACTAATGGGCGCATCGCCGATGACGCGTGAGCAAGTGACTGCGAAACATGCGA GCCAAGGCATGCCGAGTTCGAGCGCGACCAGTGAAGATCCCTACCGCGCCCCTGTGTATCACAGCTTTTCGATTTTTGAT GCCAGCAGTCGTTTGTTCGAAGACTTTGACTACGATGGGTTTTATCAAACCTTTAGCGTGACCTTCGACGTCGATGTTAA CGGCGCGTATCTTAATGAAAGAGCTGACTTATTTGCCGAGCTTTATCTCAGTCGTGATGGCGGCCCTTGGGTGCATTACT ACACCACGGACGTGTTTACTATTTATGGCGATTCAACACAGGACGATTATGAAGTGCTGACCACGCTCTACACGGGTTAT GCGACGGACCACTACGATGTGCTAATCGATGTGTACGAAGTGGGTTACAGCGATATTGTCGCGACCATCAGTGCCGATGA AACCGATGGTTTGTATGCGTTGCCACTGGAAAGTAGCGATCGAGACAGAGAGCCTGAAGTTATCGTCGTCGAAGAAAGTG GCGGTGCCTTCTCGGTATTGGGTCTGTTGTTCCTCGGTTTGTGTGCTGGGCTGCGGATGAATCGTACTCGCGGCTAA
Upstream 100 bases:
>100_bases TGTCGCGCTAAGAACACTAAATGTTGATGTTCAGCTTATGTTCACCTTCATTGCACTTTAATGGCTCCAATTTGAACGGA TTATCCATGGGGTATTCAAG
Downstream 100 bases:
>100_bases TCACCCTTTTTTCTCTCTGTGTTTATCTCAGGTAAATAGGGCTAGTATGGTCAGGTTAATTTAACTAAATGGAGATAAAT ATGATTGCTCAAGGTCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSTLNKQGMAATVNSQVNTHFVKATAIAALFLASTAVSAQPRELESSQSLTPFTAASVGIAKKAENSEQAAEQEQQALAL LQQAAPAKNVTEAAAAAVKSLAPALSSKAPTANRVQLMGASPMTREQVTAKHASQGMPSSSATSEDPYRAPVYHSFSIFD ASSRLFEDFDYDGFYQTFSVTFDVDVNGAYLNERADLFAELYLSRDGGPWVHYYTTDVFTIYGDSTQDDYEVLTTLYTGY ATDHYDVLIDVYEVGYSDIVATISADETDGLYALPLESSDRDREPEVIVVEESGGAFSVLGLLFLGLCAGLRMNRTRG
Sequences:
>Translated_318_residues MSTLNKQGMAATVNSQVNTHFVKATAIAALFLASTAVSAQPRELESSQSLTPFTAASVGIAKKAENSEQAAEQEQQALAL LQQAAPAKNVTEAAAAAVKSLAPALSSKAPTANRVQLMGASPMTREQVTAKHASQGMPSSSATSEDPYRAPVYHSFSIFD ASSRLFEDFDYDGFYQTFSVTFDVDVNGAYLNERADLFAELYLSRDGGPWVHYYTTDVFTIYGDSTQDDYEVLTTLYTGY ATDHYDVLIDVYEVGYSDIVATISADETDGLYALPLESSDRDREPEVIVVEESGGAFSVLGLLFLGLCAGLRMNRTRG >Mature_317_residues STLNKQGMAATVNSQVNTHFVKATAIAALFLASTAVSAQPRELESSQSLTPFTAASVGIAKKAENSEQAAEQEQQALALL QQAAPAKNVTEAAAAAVKSLAPALSSKAPTANRVQLMGASPMTREQVTAKHASQGMPSSSATSEDPYRAPVYHSFSIFDA SSRLFEDFDYDGFYQTFSVTFDVDVNGAYLNERADLFAELYLSRDGGPWVHYYTTDVFTIYGDSTQDDYEVLTTLYTGYA TDHYDVLIDVYEVGYSDIVATISADETDGLYALPLESSDRDREPEVIVVEESGGAFSVLGLLFLGLCAGLRMNRTRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34299; Mature: 34168
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLNKQGMAATVNSQVNTHFVKATAIAALFLASTAVSAQPRELESSQSLTPFTAASVGI CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHH AKKAENSEQAAEQEQQALALLQQAAPAKNVTEAAAAAVKSLAPALSSKAPTANRVQLMGA HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC SPMTREQVTAKHASQGMPSSSATSEDPYRAPVYHSFSIFDASSRLFEDFDYDGFYQTFSV CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEEEE TFDVDVNGAYLNERADLFAELYLSRDGGPWVHYYTTDVFTIYGDSTQDDYEVLTTLYTGY EEEEECCCHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCC ATDHYDVLIDVYEVGYSDIVATISADETDGLYALPLESSDRDREPEVIVVEESGGAFSVL CCCCHHEEEEHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHH GLLFLGLCAGLRMNRTRG HHHHHHHHCCCCCCCCCC >Mature Secondary Structure STLNKQGMAATVNSQVNTHFVKATAIAALFLASTAVSAQPRELESSQSLTPFTAASVGI CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHH AKKAENSEQAAEQEQQALALLQQAAPAKNVTEAAAAAVKSLAPALSSKAPTANRVQLMGA HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC SPMTREQVTAKHASQGMPSSSATSEDPYRAPVYHSFSIFDASSRLFEDFDYDGFYQTFSV CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEEEE TFDVDVNGAYLNERADLFAELYLSRDGGPWVHYYTTDVFTIYGDSTQDDYEVLTTLYTGY EEEEECCCHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCC ATDHYDVLIDVYEVGYSDIVATISADETDGLYALPLESSDRDREPEVIVVEESGGAFSVL CCCCHHEEEEHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHH GLLFLGLCAGLRMNRTRG HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA