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The map label for this gene is yadE [H]

Identifier: 160877423

GI number: 160877423

Start: 5102835

End: 5103881

Strand: Reverse

Name: yadE [H]

Synonym: Sbal195_4321

Alternate gene names: 160877423

Gene position: 5103881-5102835 (Counterclockwise)

Preceding gene: 160877426

Following gene: 160877417

Centisome position: 95.45

GC content: 48.9

Gene sequence:

>1047_bases
ATGGTTAAACGTGTGCTGTTGGCACTCATAGGGCTAATGACGTTTTCTGCCCATGCCGTGGTCATTCTGCAATATCACCA
TGTGTCAGAAACCACTCCGGCGGCCACAAGCGTGACGCCCGCGCAATTTCGTGAGCAAATGCAGTTTCTAGCCGATGATG
GCTTTAAGGTGATCCCGCTTTCTCAGGTAGTTGAAGCGATAAAGCAAAAACAAGATTTACCTGCGAAAACAGTCGCGATT
ACCTTCGACGATGGTTATCGCAGCATAGCCACTACGGCGCATCCTATCCTAAAGGAATTTGGATTTCCCTACACCTTGTT
TGTGGCAATTGAGCCGATTAAACAAAAGTTTACCGAGATGATGACTTGGGATGAGCTGATAACGCTATCCAAGGAAGGCG
CCGATATTGCTAACCACAGTTGGGCGCACGAACATTTGATCCGCGCCTTAGAAAATGAATCACAGGCGCAGTGGCTAGCG
AGGGTAAAGGCCAATGTTTTAGACACAGAAAAAGCCATTTTGGATGCCACAGGTCACAATTTCAAAATGCTGGCTTATCC
CTACGGTGAGTACAATCAAGCCTTGCAGGATATGTTAACTGAGAACGGCTTTGTCGCCTTGGGGCAACAATCGGGTGCCG
CTGGGCCCTATTCGCCATTAACGGCGCTGCCGCGTTTCCCTGTTGCAGGACAATATGCTGATTTAAAAAGCCTTAAGGCC
AAGCTATACAGTTTAAATATGCCTGTGATTGCGCAGAGTCCTAGTGATCCTGAGTTAAAGGGCGGCCATTGGCGCCCAGA
GCTTAAAGTCACCCTAGATATGAGCGATATCTCGGCTAAGCAAGTGATGTGTTATATCCAAGGCCAAGGTTCAAAACAGC
CGACTTGGTTGAGTGAGAACGAGTTTAGTGTTCAAGCGGATTTAGCCTTACCTGCGGGTCGTTCGCGTTACAACTGCACT
GCGCCGAGTAAGGCGCGCAATGGCTACTATTGGTTTTCTCAGCCTTGGGTGAGGCCAAAGGACGATGGCTCTTGGGTCAA
AGAGTGA

Upstream 100 bases:

>100_bases
CAGGGCAAGCGCCAGTAATTGACGATTTTTCGCGCCGTTAAGCATTAGGTCGAGCCAAGTTGATTTAGCAGTATTCATTA
ATTTCAGAGGTGTTCACATT

Downstream 100 bases:

>100_bases
TCAACGGCTAGGTTTGTATTGCGCCACTATTTTTCTAAAATCGCTAATCATTTCATCATTTAACACCTGCGGCGGTTTGC
CTAACGCTGCCGTAGGCTTA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFREQMQFLADDGFKVIPLSQVVEAIKQKQDLPAKTVAI
TFDDGYRSIATTAHPILKEFGFPYTLFVAIEPIKQKFTEMMTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLA
RVKANVLDTEKAILDATGHNFKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYSPLTALPRFPVAGQYADLKSLKA
KLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSDISAKQVMCYIQGQGSKQPTWLSENEFSVQADLALPAGRSRYNCT
APSKARNGYYWFSQPWVRPKDDGSWVKE

Sequences:

>Translated_348_residues
MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFREQMQFLADDGFKVIPLSQVVEAIKQKQDLPAKTVAI
TFDDGYRSIATTAHPILKEFGFPYTLFVAIEPIKQKFTEMMTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLA
RVKANVLDTEKAILDATGHNFKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYSPLTALPRFPVAGQYADLKSLKA
KLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSDISAKQVMCYIQGQGSKQPTWLSENEFSVQADLALPAGRSRYNCT
APSKARNGYYWFSQPWVRPKDDGSWVKE
>Mature_348_residues
MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFREQMQFLADDGFKVIPLSQVVEAIKQKQDLPAKTVAI
TFDDGYRSIATTAHPILKEFGFPYTLFVAIEPIKQKFTEMMTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLA
RVKANVLDTEKAILDATGHNFKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYSPLTALPRFPVAGQYADLKSLKA
KLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSDISAKQVMCYIQGQGSKQPTWLSENEFSVQADLALPAGRSRYNCT
APSKARNGYYWFSQPWVRPKDDGSWVKE

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=217, Percent_Identity=27.6497695852535, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787260, Length=259, Percent_Identity=23.9382239382239, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 38826; Mature: 38826

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFREQMQFLADDGFKVIPL
CHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEH
SQVVEAIKQKQDLPAKTVAITFDDGYRSIATTAHPILKEFGFPYTLFVAIEPIKQKFTEM
HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHH
MTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLARVKANVLDTEKAILDATGHN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
FKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYSPLTALPRFPVAGQYADLKSLKA
EEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHH
KLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSDISAKQVMCYIQGQGSKQPTWLSEN
HHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEECCC
EFSVQADLALPAGRSRYNCTAPSKARNGYYWFSQPWVRPKDDGSWVKE
CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKRVLLALIGLMTFSAHAVVILQYHHVSETTPAATSVTPAQFREQMQFLADDGFKVIPL
CHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEH
SQVVEAIKQKQDLPAKTVAITFDDGYRSIATTAHPILKEFGFPYTLFVAIEPIKQKFTEM
HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHH
MTWDELITLSKEGADIANHSWAHEHLIRALENESQAQWLARVKANVLDTEKAILDATGHN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
FKMLAYPYGEYNQALQDMLTENGFVALGQQSGAAGPYSPLTALPRFPVAGQYADLKSLKA
EEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHH
KLYSLNMPVIAQSPSDPELKGGHWRPELKVTLDMSDISAKQVMCYIQGQGSKQPTWLSEN
HHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEECCC
EFSVQADLALPAGRSRYNCTAPSKARNGYYWFSQPWVRPKDDGSWVKE
CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]