Click here to switch to the map view.

The map label for this gene is ctaA [H]

Identifier: 160877420

GI number: 160877420

Start: 5100257

End: 5101234

Strand: Direct

Name: ctaA [H]

Synonym: Sbal195_4318

Alternate gene names: 160877420

Gene position: 5100257-5101234 (Clockwise)

Preceding gene: 160877419

Following gene: 160877421

Centisome position: 95.38

GC content: 49.9

Gene sequence:

>978_bases
ATGCAGCTAACTTGGGTTCTACGCTTAACCTTAGTCTTTACTTTGTTGGTGATCTTAATGGGCGCTTACACTCGCCTATC
GGACGCAGGGCTAGGCTGCCCAGATTGGCCGGGTTGCTACGGCCATATCAAGGTGCCAACCCAAGACCATGAAATCGCCC
ATGCACAAACCATCTTCCCAGATCACGATATCCATCCTGAGAAAGCTTGGCTGGAGATGATCCACAGATATATCGCCGGC
GGACTTGGCTTACTAGTATTGTTCATCTTAGTGCTGTGTTTAAAAACGCCGGAAGCGCCGAAAAAATTGCCGCTCATCAT
AGTGTTATTGATCCTCTTTCAAGCGGCACTCGGCATGTGGACAGTGACGATGAAACTCATGCCTATAGTGGTGATGTCGC
ATCTTATTGGTGGCTTCAGCCTGATTTCCCTGCTGTTACTCCTCTATCTGCGAACCCGACCACGGCGGATCTTTAATAGC
GAAACCCATGCCCGTAATCTGGCACCGCTGGCACTGGTGAGCCTATTCGTTCTTGTAGGACAGATTATGTTGGGCGCTTG
GACATCATCTAATTATGCGGCGCTCGCCTGCACCGCTTTACCCATTTGCGAAGGCAACTGGGTGGATAATTTGGCAATAG
CGGAAGCTTTTTCGCCGTTTCAAGGCCAACACCACAGTTTCGAATTTGGAGTGCTCGATTACCCAGCCCGTATGACTATC
CATATCGCCCACCGAATTGGCGCTATCGTTACCGCGAGTTTATTACTCGTGCTCGCCTATCGATTATTTGTTGGCGCTGC
AGGGATGAGGGCCTTAAGCCTCTTATTGGCAGGGCTAGTGATCCTACAAGTGAGCTTAGGTATTTCTAACGTAGTAATGC
ATTTACCACTGGGTATTGCCGTGTCTCACAACGGCGGGGCGGCACTACTGCTGCTGACCTTAGTCGCAATCAACTATTTC
TTATGGCGCAAAGCCTAA

Upstream 100 bases:

>100_bases
TGCGCTATCCCCAAGTGCAGAGCAAAGAAGCCCATTTAGCTCAAGGCAAGGCCTTGGTTGCGGATCTGCGTAAGTTGTTA
AAACTGTCGAGGGTAGATTG

Downstream 100 bases:

>100_bases
GCGAGGGCTCCAAGATGGCAAAACCACTCTCAATCACCAGTAGCCTACCCACGTTCAGCGTGACATGGCGCGCCTATTTT
GAAATGACTAAACCTAAAGT

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHEIAHAQTIFPDHDIHPEKAWLEMIHRYIAG
GLGLLVLFILVLCLKTPEAPKKLPLIIVLLILFQAALGMWTVTMKLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNS
ETHARNLAPLALVSLFVLVGQIMLGAWTSSNYAALACTALPICEGNWVDNLAIAEAFSPFQGQHHSFEFGVLDYPARMTI
HIAHRIGAIVTASLLLVLAYRLFVGAAGMRALSLLLAGLVILQVSLGISNVVMHLPLGIAVSHNGGAALLLLTLVAINYF
LWRKA

Sequences:

>Translated_325_residues
MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHEIAHAQTIFPDHDIHPEKAWLEMIHRYIAG
GLGLLVLFILVLCLKTPEAPKKLPLIIVLLILFQAALGMWTVTMKLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNS
ETHARNLAPLALVSLFVLVGQIMLGAWTSSNYAALACTALPICEGNWVDNLAIAEAFSPFQGQHHSFEFGVLDYPARMTI
HIAHRIGAIVTASLLLVLAYRLFVGAAGMRALSLLLAGLVILQVSLGISNVVMHLPLGIAVSHNGGAALLLLTLVAINYF
LWRKA
>Mature_325_residues
MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHEIAHAQTIFPDHDIHPEKAWLEMIHRYIAG
GLGLLVLFILVLCLKTPEAPKKLPLIIVLLILFQAALGMWTVTMKLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNS
ETHARNLAPLALVSLFVLVGQIMLGAWTSSNYAALACTALPICEGNWVDNLAIAEAFSPFQGQHHSFEFGVLDYPARMTI
HIAHRIGAIVTASLLLVLAYRLFVGAAGMRALSLLLAGLVILQVSLGISNVVMHLPLGIAVSHNGGAALLLLTLVAINYF
LWRKA

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 35627; Mature: 35627

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHEIAHAQTIFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCC
DHDIHPEKAWLEMIHRYIAGGLGLLVLFILVLCLKTPEAPKKLPLIIVLLILFQAALGMW
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TVTMKLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNSETHARNLAPLALVSLFVLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHHHHH
QIMLGAWTSSNYAALACTALPICEGNWVDNLAIAEAFSPFQGQHHSFEFGVLDYPARMTI
HHHHHHCCCCCCEEEHEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
HIAHRIGAIVTASLLLVLAYRLFVGAAGMRALSLLLAGLVILQVSLGISNVVMHLPLGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEE
VSHNGGAALLLLTLVAINYFLWRKA
EECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLTWVLRLTLVFTLLVILMGAYTRLSDAGLGCPDWPGCYGHIKVPTQDHEIAHAQTIFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCC
DHDIHPEKAWLEMIHRYIAGGLGLLVLFILVLCLKTPEAPKKLPLIIVLLILFQAALGMW
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
TVTMKLMPIVVMSHLIGGFSLISLLLLLYLRTRPRRIFNSETHARNLAPLALVSLFVLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHHHHH
QIMLGAWTSSNYAALACTALPICEGNWVDNLAIAEAFSPFQGQHHSFEFGVLDYPARMTI
HHHHHHCCCCCCEEEHEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
HIAHRIGAIVTASLLLVLAYRLFVGAAGMRALSLLLAGLVILQVSLGISNVVMHLPLGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEE
VSHNGGAALLLLTLVAINYFLWRKA
EECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA