| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877401
Identifier: 160877401
GI number: 160877401
Start: 5079549
End: 5079911
Strand: Direct
Name: 160877401
Synonym: Sbal195_4299
Alternate gene names: NA
Gene position: 5079549-5079911 (Clockwise)
Preceding gene: 160877399
Following gene: 160877402
Centisome position: 94.99
GC content: 48.76
Gene sequence:
>363_bases ATGGCTAAATTTTGGATCACCATAGCAGTGCTATTTTCGCTAATCGCCCAATCGGCGATGGTGAGTGCTATGCCAACTTC AGCCAATACCAATGGCCACAGCGGTCAAACCATGCTGATGATGGATGCAGAAATGAACTGCACCATGCCAGATTGTTCTG CATCCGATTGCTTGCAACACTGCCAAGATAGCATGACAAATCATTGCCAAATCCATTGCCTATCATCACTTTTCATTGAG CCTGCAGCGCTAAAACTGGCCTTCGCCAACCCAGCAAGCAAGCGTATTGCCATCCAAGGCTGGGCGATGCAAACTGCCGA TCTTGGACTCATCACACCGCCTCCCACCTCTAATTCACTGTAA
Upstream 100 bases:
>100_bases CAGGAAATAAATCATTAGAAATTAAAAATTGAACGCGATATGAAACTTTATCGGGTTAGCTAAGGTCTCTAAGGGTAAGC AATCAATTTTCCGAGTTCTC
Downstream 100 bases:
>100_bases CGTCTTTCGTTTTTTACAACGTAAAACCGACTAAACACCTTTGATTGCGCCGCTGCATATTCGCACCGCAACGAGGTACA GAGAATTTTTGGAGTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAKFWITIAVLFSLIAQSAMVSAMPTSANTNGHSGQTMLMMDAEMNCTMPDCSASDCLQHCQDSMTNHCQIHCLSSLFIE PAALKLAFANPASKRIAIQGWAMQTADLGLITPPPTSNSL
Sequences:
>Translated_120_residues MAKFWITIAVLFSLIAQSAMVSAMPTSANTNGHSGQTMLMMDAEMNCTMPDCSASDCLQHCQDSMTNHCQIHCLSSLFIE PAALKLAFANPASKRIAIQGWAMQTADLGLITPPPTSNSL >Mature_119_residues AKFWITIAVLFSLIAQSAMVSAMPTSANTNGHSGQTMLMMDAEMNCTMPDCSASDCLQHCQDSMTNHCQIHCLSSLFIEP AALKLAFANPASKRIAIQGWAMQTADLGLITPPPTSNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12850; Mature: 12719
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 12.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFWITIAVLFSLIAQSAMVSAMPTSANTNGHSGQTMLMMDAEMNCTMPDCSASDCLQH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH CQDSMTNHCQIHCLSSLFIEPAALKLAFANPASKRIAIQGWAMQTADLGLITPPPTSNSL HHHHHCCCEEEEEHHHHHCCCCCEEEEECCCCCCEEEEECCEEECCCCCEECCCCCCCCC >Mature Secondary Structure AKFWITIAVLFSLIAQSAMVSAMPTSANTNGHSGQTMLMMDAEMNCTMPDCSASDCLQH CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH CQDSMTNHCQIHCLSSLFIEPAALKLAFANPASKRIAIQGWAMQTADLGLITPPPTSNSL HHHHHCCCEEEEEHHHHHCCCCCEEEEECCCCCCEEEEECCEEECCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA