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The map label for this gene is ftsY [H]

Identifier: 160877397

GI number: 160877397

Start: 5075685

End: 5077307

Strand: Reverse

Name: ftsY [H]

Synonym: Sbal195_4295

Alternate gene names: 160877397

Gene position: 5077307-5075685 (Counterclockwise)

Preceding gene: 160877400

Following gene: 160877396

Centisome position: 94.95

GC content: 50.59

Gene sequence:

>1623_bases
ATGGCAAAGAAAGGTTTTTTCTCCTGGTTTCGTAAAGATAAGTCACAAGATGAGGTCGTCGCTGAAACTCCAGTTGTTAC
TCCAACACCAGACACTGAAGCAACAGAGCGTTTAGAACAGGAACGCGCAGAGGCGCAACGTTTAGCTGTTGAGGCAGAGG
CTCAAGCGGCCGCAGCAAAGCTGGCAGCAGAACAGTTAGCTGCCGAGCAGGCGCAAGCCGAGCGTATTGTCCAAGAGCAA
GCGCAAATTGAAGCTCAGCGTTTAGCCGAGCAACAAGCCGAAGCAGCGCGTCTGGCTGCCGCTCAGCAAGAGGCCGAACA
ACTTGCAGCAAATAAGTTAGCCGCTGAACAAGCAGTTGCAGAGCAATTAGCTCAAGCACAAGCTATGGCTGAAGCCGAGC
GTATTGCCCACGAACAAGCACAAATCGAAGCTCAACGTTTAGCCGAGCAACAGGCCGAAGCGGCACGACTTGCGAAAGTG
CAAGCCGAGCACGTTGCTCAAGAGCAAGCACAAATCGAAGCCCAACTTTTAGCCGAACAACAGGCAGAAGCGGCACGACT
GGCGGCAGCTCAGTTAGAAGCTGAACGTGCTCGTGTTGCCGCCGAACAAGCTGCCGCTGAAGCGTTAGCTGCGGAGCAAC
CCGCTGAGCCTGTTGTTGAATTGCAGCCTGAGCCGCAGGCGAGACCCGTTAAGGAAGGGCTATTTGCTCGCTTGAAGCGC
GGTTTGATGCGTACCAGCGAGAATATTGGCAGTGGTTTTATCGGCCTATTCCGCGGCAAGAAAATTGATGACGATCTGTT
TGAAGAACTCGAAGAACAGTTATTAATCGCCGATGTTGGCGTCGAAACAACCACGCGTTTGATCAAGAATTTGACCGAGC
AAGCGTCGCGTAAGCAATTGAAAGATGCTGAAGCTTTATATGACTTGCTGCGGGAGGAAATGCAGAAGACGCTCGATCCT
GTCGCAATTCCGTTAGTGCCAGACAATGCAAATGGCCCATTTGTGATCTTAATGGTCGGCGTTAATGGTGTGGGTAAAAC
CACCACTATCGGCAAATTAGCCAAACAATATCAGAGCCAAGGTAAATCGGTGATGTTAGCCGCGGGCGACACCTTCCGCG
CAGCGGCGGTAGAGCAGCTACAGGTTTGGGGCCAACGTAATGATATTACTGTGATTGCCCAACACACAGGTGCCGATAGT
GCCTCTGTACTGTTCGATGCTTTGCAAGCGGCTAAAGCCCGTAAAGTGGATGTGTTGATCGCCGACACAGCCGGTCGTCT
GCAAAACAAAGCGCACTTGATGGAAGAATTGAAGAAAGTGGTGCGAGTGATGAAAAAACTCGACCCAGATACGCCACATG
AGGTCATGCTGACATTAGATGCGAGCACAGGGCAAAACGCGATTAGCCAAGCACAATTATTTCAGGAAGCCGTAGGTGTA
ACGGGTATTACCATCAGCAAGTTAGATGGAACGGCTAAGGGCGGCGTGGTGTTTGCGATTGCAGACAAGTTTAATATTCC
GATCCGTTACATAGGCGTGGGTGAGCAAATTGATGATTTGCGTACTTTTAATTCGAAAGAATTTATCGATGCCTTGTTCA
CTCAAGAAAAAGCGGATAGCTAA

Upstream 100 bases:

>100_bases
GCTAATTGCCGACTTTTTGGGCGTAATTGCCGAGGCAATCTGGTATAACATCAGGGTCTTATTCAAAATTCAACACTGAA
GTAGAGCGCTGGAATCACAC

Downstream 100 bases:

>100_bases
TTTATGATTGATTTTCAGCAGGTCAGTAAGATTTATCCTGGCGGCCAAATGGCGCTGGAAGATGTGAATTTTCATCTACA
ACAAGGTGAAATGGCATTTT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MAKKGFFSWFRKDKSQDEVVAETPVVTPTPDTEATERLEQERAEAQRLAVEAEAQAAAAKLAAEQLAAEQAQAERIVQEQ
AQIEAQRLAEQQAEAARLAAAQQEAEQLAANKLAAEQAVAEQLAQAQAMAEAERIAHEQAQIEAQRLAEQQAEAARLAKV
QAEHVAQEQAQIEAQLLAEQQAEAARLAAAQLEAERARVAAEQAAAEALAAEQPAEPVVELQPEPQARPVKEGLFARLKR
GLMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDAEALYDLLREEMQKTLDP
VAIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQLQVWGQRNDITVIAQHTGADS
ASVLFDALQAAKARKVDVLIADTAGRLQNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGV
TGITISKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS

Sequences:

>Translated_540_residues
MAKKGFFSWFRKDKSQDEVVAETPVVTPTPDTEATERLEQERAEAQRLAVEAEAQAAAAKLAAEQLAAEQAQAERIVQEQ
AQIEAQRLAEQQAEAARLAAAQQEAEQLAANKLAAEQAVAEQLAQAQAMAEAERIAHEQAQIEAQRLAEQQAEAARLAKV
QAEHVAQEQAQIEAQLLAEQQAEAARLAAAQLEAERARVAAEQAAAEALAAEQPAEPVVELQPEPQARPVKEGLFARLKR
GLMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDAEALYDLLREEMQKTLDP
VAIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQLQVWGQRNDITVIAQHTGADS
ASVLFDALQAAKARKVDVLIADTAGRLQNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGV
TGITISKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS
>Mature_539_residues
AKKGFFSWFRKDKSQDEVVAETPVVTPTPDTEATERLEQERAEAQRLAVEAEAQAAAAKLAAEQLAAEQAQAERIVQEQA
QIEAQRLAEQQAEAARLAAAQQEAEQLAANKLAAEQAVAEQLAQAQAMAEAERIAHEQAQIEAQRLAEQQAEAARLAKVQ
AEHVAQEQAQIEAQLLAEQQAEAARLAAAQLEAERARVAAEQAAAEALAAEQPAEPVVELQPEPQARPVKEGLFARLKRG
LMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQLKDAEALYDLLREEMQKTLDPV
AIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQLQVWGQRNDITVIAQHTGADSA
SVLFDALQAAKARKVDVLIADTAGRLQNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGVT
GITISKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=278, Percent_Identity=32.3741007194245, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI226371618, Length=222, Percent_Identity=33.7837837837838, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI295424842, Length=225, Percent_Identity=32.4444444444444, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI23308697, Length=224, Percent_Identity=32.5892857142857, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI89061728, Length=143, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1789874, Length=477, Percent_Identity=62.0545073375262, Blast_Score=497, Evalue=1e-142,
Organism=Escherichia coli, GI1788963, Length=306, Percent_Identity=32.3529411764706, Blast_Score=138, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=222, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=319, Percent_Identity=27.8996865203762, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=199, Percent_Identity=37.1859296482412, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=314, Percent_Identity=26.4331210191083, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17647949, Length=286, Percent_Identity=31.1188811188811, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=26.2458471760797, Blast_Score=110, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 58553; Mature: 58422

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGFFSWFRKDKSQDEVVAETPVVTPTPDTEATERLEQERAEAQRLAVEAEAQAAAAK
CCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAEQLAAEQAQAERIVQEQAQIEAQRLAEQQAEAARLAAAQQEAEQLAANKLAAEQAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLAQAQAMAEAERIAHEQAQIEAQRLAEQQAEAARLAKVQAEHVAQEQAQIEAQLLAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAARLAAAQLEAERARVAAEQAAAEALAAEQPAEPVVELQPEPQARPVKEGLFARLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
GLMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQL
HHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KDAEALYDLLREEMQKTLDPVAIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQ
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC
GKSVMLAAGDTFRAAAVEQLQVWGQRNDITVIAQHTGADSASVLFDALQAAKARKVDVLI
CCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
ADTAGRLQNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGV
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
TGITISKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS
CCEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKKGFFSWFRKDKSQDEVVAETPVVTPTPDTEATERLEQERAEAQRLAVEAEAQAAAAK
CCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAEQLAAEQAQAERIVQEQAQIEAQRLAEQQAEAARLAAAQQEAEQLAANKLAAEQAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLAQAQAMAEAERIAHEQAQIEAQRLAEQQAEAARLAKVQAEHVAQEQAQIEAQLLAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAARLAAAQLEAERARVAAEQAAAEALAAEQPAEPVVELQPEPQARPVKEGLFARLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
GLMRTSENIGSGFIGLFRGKKIDDDLFEELEEQLLIADVGVETTTRLIKNLTEQASRKQL
HHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KDAEALYDLLREEMQKTLDPVAIPLVPDNANGPFVILMVGVNGVGKTTTIGKLAKQYQSQ
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC
GKSVMLAAGDTFRAAAVEQLQVWGQRNDITVIAQHTGADSASVLFDALQAAKARKVDVLI
CCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
ADTAGRLQNKAHLMEELKKVVRVMKKLDPDTPHEVMLTLDASTGQNAISQAQLFQEAVGV
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
TGITISKLDGTAKGGVVFAIADKFNIPIRYIGVGEQIDDLRTFNSKEFIDALFTQEKADS
CCEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]