| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877368
Identifier: 160877368
GI number: 160877368
Start: 5045691
End: 5046242
Strand: Reverse
Name: 160877368
Synonym: Sbal195_4266
Alternate gene names: NA
Gene position: 5046242-5045691 (Counterclockwise)
Preceding gene: 160877369
Following gene: 160877367
Centisome position: 94.37
GC content: 44.57
Gene sequence:
>552_bases ATGGACGTTAAGACCTATCTACAGGCATTGAACGCGCTCTACGCCAATGTGAATCAAACATTCGCATTGAATCATGGTTT ATCCAACTCAGCCTTAGATGAAGCTGAAAAACAATTAGGTTTTACACTTGCTCCCCCGCTCAGGGAGCTTTGGGGATATG CCAATGGTGGCAACGAGTGGAGCACGGTATTTGCCCGAAAAGATTACTTTTGCCGATATGATTTTTTGTCATTAGCCTCG TCACTTAAATATCGTGACCGAATGCAAAAACAGGCTCAGCACTATGTGGGTTACCACGAGCCAGAAGTTCGGGATCCTAA AATCCAATCCGGATGGTATCAAGAAGGTTGGTTGCCCTTCGCTCAATTTGGGGGCGGCACATTACTCTTGATTGCGGATC ATTCACCCTCAGCACTAGGCCAAATGGGGCAAGTGATCGCATACACCCATGACCCCGATATGATGGACTTTATTTGTCCA AACCTAAGCCAATTTTTTGAACAATCCTTAGCGCAAATCAGTTTATATCCAGATGAATTAATTGAGGACTAA
Upstream 100 bases:
>100_bases TCTAATTCGATTAAATAAGTTCCCATAAGTGCATATGCGAGCGGTATAAACCAAAAGGATTAACACTGCTGCTAAGTGTC AGGATGAAGGGGTAAATACA
Downstream 100 bases:
>100_bases GGATAACGAAAATGAACGTCCACTACTCGATAAGCCTAGTAAACCTATGATTACATTTTGAACTTCAGGGCAACATGAAG TGAGGTATGATGTGAAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MDVKTYLQALNALYANVNQTFALNHGLSNSALDEAEKQLGFTLAPPLRELWGYANGGNEWSTVFARKDYFCRYDFLSLAS SLKYRDRMQKQAQHYVGYHEPEVRDPKIQSGWYQEGWLPFAQFGGGTLLLIADHSPSALGQMGQVIAYTHDPDMMDFICP NLSQFFEQSLAQISLYPDELIED
Sequences:
>Translated_183_residues MDVKTYLQALNALYANVNQTFALNHGLSNSALDEAEKQLGFTLAPPLRELWGYANGGNEWSTVFARKDYFCRYDFLSLAS SLKYRDRMQKQAQHYVGYHEPEVRDPKIQSGWYQEGWLPFAQFGGGTLLLIADHSPSALGQMGQVIAYTHDPDMMDFICP NLSQFFEQSLAQISLYPDELIED >Mature_183_residues MDVKTYLQALNALYANVNQTFALNHGLSNSALDEAEKQLGFTLAPPLRELWGYANGGNEWSTVFARKDYFCRYDFLSLAS SLKYRDRMQKQAQHYVGYHEPEVRDPKIQSGWYQEGWLPFAQFGGGTLLLIADHSPSALGQMGQVIAYTHDPDMMDFICP NLSQFFEQSLAQISLYPDELIED
Specific function: Unknown
COG id: COG4282
COG function: function code G; Protein involved in beta-1,3-glucan synthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20831; Mature: 20831
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKTYLQALNALYANVNQTFALNHGLSNSALDEAEKQLGFTLAPPLRELWGYANGGNEW CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCH STVFARKDYFCRYDFLSLASSLKYRDRMQKQAQHYVGYHEPEVRDPKIQSGWYQEGWLPF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH AQFGGGTLLLIADHSPSALGQMGQVIAYTHDPDMMDFICPNLSQFFEQSLAQISLYPDEL HHCCCCEEEEEECCCCHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHEECCHHHH IED HCC >Mature Secondary Structure MDVKTYLQALNALYANVNQTFALNHGLSNSALDEAEKQLGFTLAPPLRELWGYANGGNEW CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCH STVFARKDYFCRYDFLSLASSLKYRDRMQKQAQHYVGYHEPEVRDPKIQSGWYQEGWLPF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH AQFGGGTLLLIADHSPSALGQMGQVIAYTHDPDMMDFICPNLSQFFEQSLAQISLYPDEL HHCCCCEEEEEECCCCHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHEECCHHHH IED HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA