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The map label for this gene is bkdR [H]

Identifier: 160877219

GI number: 160877219

Start: 4873149

End: 4873649

Strand: Direct

Name: bkdR [H]

Synonym: Sbal195_4115

Alternate gene names: 160877219

Gene position: 4873149-4873649 (Clockwise)

Preceding gene: 160877217

Following gene: 160877220

Centisome position: 91.13

GC content: 47.5

Gene sequence:

>501_bases
ATGACAGAAACTCACCCATACAAACTCGATCAACTCGATTTAACCATTTTGCGTTTACTGCAAACCCACGGCAGATTGTC
CAACCTCGAACTGGCCAATAAAGTCGGCCTGTCGCCGTCCCCTTGCTCGCGCCGTGTTAAAGCCTTAGAAGAAGCGGGTT
ATATTGCCGATTATGCGACGCGTCTGTCGGCGGATAAGTTCAACCTGCATTTGACTGCGTATATCCATGTGCGGATGGAA
AAACACACGCCAGCAATCCTCAATCAATTTGAAGCCAATGTACTAGCCTACGAAGAAGTCCAAGAATGCGCGCTGATCAC
AGGGTCTGAAGCCGACTACCAACTTAAAGTGTTAGTACAAGATATGGCGCACTTTCGCACTTTCCTGTTAGATAAACTCA
CGACCAATGTGCATATCGCAGGTGTGCATTCCAGCTTTGTGTTGAAAAAGGTCAAGGACCACACGGCCATTCCCTTAAGC
CATATCACCATTCAACCATAG

Upstream 100 bases:

>100_bases
TCACTCTCCCAACTTTTAAATCCTGATTTACTCAAGATTTTTGGCAAACTTGGCTAAGGCTGGCAAACTAGGGGCTGACC
CAGCTAACCCTAAGCTTTCG

Downstream 100 bases:

>100_bases
GCTATGTAAAAGATACGGCGTTCAAACACAAAGTGCTGCGACATGACTCAGACTTATCCAGTCACAATCGTGACTCAAGT
AAAGTCATAGCATCAAAATA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTETHPYKLDQLDLTILRLLQTHGRLSNLELANKVGLSPSPCSRRVKALEEAGYIADYATRLSADKFNLHLTAYIHVRME
KHTPAILNQFEANVLAYEEVQECALITGSEADYQLKVLVQDMAHFRTFLLDKLTTNVHIAGVHSSFVLKKVKDHTAIPLS
HITIQP

Sequences:

>Translated_166_residues
MTETHPYKLDQLDLTILRLLQTHGRLSNLELANKVGLSPSPCSRRVKALEEAGYIADYATRLSADKFNLHLTAYIHVRME
KHTPAILNQFEANVLAYEEVQECALITGSEADYQLKVLVQDMAHFRTFLLDKLTTNVHIAGVHSSFVLKKVKDHTAIPLS
HITIQP
>Mature_165_residues
TETHPYKLDQLDLTILRLLQTHGRLSNLELANKVGLSPSPCSRRVKALEEAGYIADYATRLSADKFNLHLTAYIHVRMEK
HTPAILNQFEANVLAYEEVQECALITGSEADYQLKVLVQDMAHFRTFLLDKLTTNVHIAGVHSSFVLKKVKDHTAIPLSH
ITIQP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=152, Percent_Identity=36.1842105263158, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=31.1258278145695, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18730; Mature: 18599

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETHPYKLDQLDLTILRLLQTHGRLSNLELANKVGLSPSPCSRRVKALEEAGYIADYAT
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH
RLSADKFNLHLTAYIHVRMEKHTPAILNQFEANVLAYEEVQECALITGSEADYQLKVLVQ
HCCCCCEEEEEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHH
DMAHFRTFLLDKLTTNVHIAGVHSSFVLKKVKDHTAIPLSHITIQP
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
TETHPYKLDQLDLTILRLLQTHGRLSNLELANKVGLSPSPCSRRVKALEEAGYIADYAT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH
RLSADKFNLHLTAYIHVRMEKHTPAILNQFEANVLAYEEVQECALITGSEADYQLKVLVQ
HCCCCCEEEEEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHH
DMAHFRTFLLDKLTTNVHIAGVHSSFVLKKVKDHTAIPLSHITIQP
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]