| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is creD [H]
Identifier: 160877216
GI number: 160877216
Start: 4869794
End: 4871272
Strand: Direct
Name: creD [H]
Synonym: Sbal195_4112
Alternate gene names: 160877216
Gene position: 4869794-4871272 (Clockwise)
Preceding gene: 160877215
Following gene: 160877217
Centisome position: 91.07
GC content: 47.33
Gene sequence:
>1479_bases ATGTTCAACATTATCGTGGGCGTCATCGCCCTATTCACTTTGGCATTATTTGGTGGTGCAGCCTACTTAGTCGTACGCGC ACTGCTAAAAAAATTCAATCGAGATCAAGGAATAGACATGGAATCGCCACAGGCACAGTCCTCACACAGCAAAGGGACAC CACTCGCCAAAAACACCACCCTATTGAAAGCGTTAACCATAGGCATACTGTCGATCTTAGCTATGATCCCATTAGGGATC ATCATGGATATGACCTCAGATCGCGAAGCCTTGTACCACAGTGTTGTCGATGAAATTGGCCGTTCATGGGGCGAGCAGCA AACCCTCTCAGGCCCTGTGCTTGTCATTCCCTATAGCTATTTTGTGATGCAGGAAGAAGTCAGCGCCGATGGCAAAAATC GCCATCAAGTGAAGCGTACCTATCAAGATGAATTAGTCATACTGCCAAAAAAACTCAAGCTCGATTTAGATCTTAAGCAT GACTTTCGTACTCGCGGGATTTATCAATCCTTAGTCTATAACGCCACTTTGCAAGGCAAGGCAGATTTCAGTTTAAGTAA TTATGAAATCCCTAACCTCATTGCCTTTGACAATAAAAATGCGCGCCTCGCCTTTGGTGTTTCATCAAATCAAGCCATTG ATAAAGTGGATAGACTTGAATTAACGGGTGATGCGGTCACGCTTTCAGGCTCACTGATGTCGGGCACCGGATTAGGCAGC ACAGGCGGTCTAGAAAAGGGCTTTAACCAAGGCGTACAAGTCGCCGAAGCCAGTGACTTTAGCGTGGACTTTGCAATGAC ACTGCGCGGTTCTCAGTCCATCAGCGCCCTGCCACTGGGTGAGCAAACCTTAATTAACATTCACGCCGACTGGCCACACC CTAGCTTTAAGGGATTGTTACCTGCAGAGCGGGATATTAACGCGCAGGGCTTTACGGCAAGCTGGAATATCAGTCACTTA ACCCGTAACTATCCGCAGGAGTTCATTAAGAGTAATCAATCGAGCCTGACCGAAGTATCGGCCAATGCGATTTTATTCGA ACCTGTGACTCACTATGGCAAGATTGAACGCTCAGTGAAATACGGCCTGCTGTTTATCGTACTGACTTTTATCATGTTGT TCATTTTTGAGCTTGGGCAAAAAACCAGCCTCAGCACGATTCAATATGTGTTAGTCGGCAGCGCCATGGCTTTGTTCTAT TTGCTACTGCTGTCGCTGTCTGAGCATTTAGCCTTCTTGCATGCCTATTTAATTGCCGCCTGTATTCCCGTGTTGTCGGT ATCCGCCTACGTGGGCAGTGCTACCACAAGCATCAAGCGCGGCGGGATAGTGGGCATTATGCTGGTGAGTTTATATGCCG TGCTGTACTCGATACTGCAACTGGAAGACTACGCCCTGCTGATGGGCACAGGATTACTGTTAGTCGTCCTACTGATTTTG ATGTTTGTCACAAGGCATCAACCCAAGAACACGGCGTAA
Upstream 100 bases:
>100_bases AAATCTGTTTTAATACTTGCCGTTAATGCTTAGCCTTCTTGGCGAAACATGGCATAAAAACTTAAGGCTCAGTACTGTAT TTCATAGGGAATGAAATCAC
Downstream 100 bases:
>100_bases CAGCGCCCAACCGATCCACCCTTGAAGACCCCCGACAGCGCCACTTTTTGCTGTCGGGATTTTTTTATTGGCAAAGCCAT TGCCGCGTTGTAGCCTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MFNIIVGVIALFTLALFGGAAYLVVRALLKKFNRDQGIDMESPQAQSSHSKGTPLAKNTTLLKALTIGILSILAMIPLGI IMDMTSDREALYHSVVDEIGRSWGEQQTLSGPVLVIPYSYFVMQEEVSADGKNRHQVKRTYQDELVILPKKLKLDLDLKH DFRTRGIYQSLVYNATLQGKADFSLSNYEIPNLIAFDNKNARLAFGVSSNQAIDKVDRLELTGDAVTLSGSLMSGTGLGS TGGLEKGFNQGVQVAEASDFSVDFAMTLRGSQSISALPLGEQTLINIHADWPHPSFKGLLPAERDINAQGFTASWNISHL TRNYPQEFIKSNQSSLTEVSANAILFEPVTHYGKIERSVKYGLLFIVLTFIMLFIFELGQKTSLSTIQYVLVGSAMALFY LLLLSLSEHLAFLHAYLIAACIPVLSVSAYVGSATTSIKRGGIVGIMLVSLYAVLYSILQLEDYALLMGTGLLLVVLLIL MFVTRHQPKNTA
Sequences:
>Translated_492_residues MFNIIVGVIALFTLALFGGAAYLVVRALLKKFNRDQGIDMESPQAQSSHSKGTPLAKNTTLLKALTIGILSILAMIPLGI IMDMTSDREALYHSVVDEIGRSWGEQQTLSGPVLVIPYSYFVMQEEVSADGKNRHQVKRTYQDELVILPKKLKLDLDLKH DFRTRGIYQSLVYNATLQGKADFSLSNYEIPNLIAFDNKNARLAFGVSSNQAIDKVDRLELTGDAVTLSGSLMSGTGLGS TGGLEKGFNQGVQVAEASDFSVDFAMTLRGSQSISALPLGEQTLINIHADWPHPSFKGLLPAERDINAQGFTASWNISHL TRNYPQEFIKSNQSSLTEVSANAILFEPVTHYGKIERSVKYGLLFIVLTFIMLFIFELGQKTSLSTIQYVLVGSAMALFY LLLLSLSEHLAFLHAYLIAACIPVLSVSAYVGSATTSIKRGGIVGIMLVSLYAVLYSILQLEDYALLMGTGLLLVVLLIL MFVTRHQPKNTA >Mature_492_residues MFNIIVGVIALFTLALFGGAAYLVVRALLKKFNRDQGIDMESPQAQSSHSKGTPLAKNTTLLKALTIGILSILAMIPLGI IMDMTSDREALYHSVVDEIGRSWGEQQTLSGPVLVIPYSYFVMQEEVSADGKNRHQVKRTYQDELVILPKKLKLDLDLKH DFRTRGIYQSLVYNATLQGKADFSLSNYEIPNLIAFDNKNARLAFGVSSNQAIDKVDRLELTGDAVTLSGSLMSGTGLGS TGGLEKGFNQGVQVAEASDFSVDFAMTLRGSQSISALPLGEQTLINIHADWPHPSFKGLLPAERDINAQGFTASWNISHL TRNYPQEFIKSNQSSLTEVSANAILFEPVTHYGKIERSVKYGLLFIVLTFIMLFIFELGQKTSLSTIQYVLVGSAMALFY LLLLSLSEHLAFLHAYLIAACIPVLSVSAYVGSATTSIKRGGIVGIMLVSLYAVLYSILQLEDYALLMGTGLLLVVLLIL MFVTRHQPKNTA
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=409, Percent_Identity=30.8068459657702, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 53886; Mature: 53886
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNIIVGVIALFTLALFGGAAYLVVRALLKKFNRDQGIDMESPQAQSSHSKGTPLAKNTT CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LLKALTIGILSILAMIPLGIIMDMTSDREALYHSVVDEIGRSWGEQQTLSGPVLVIPYSY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH FVMQEEVSADGKNRHQVKRTYQDELVILPKKLKLDLDLKHDFRTRGIYQSLVYNATLQGK HHHHHHHCCCCCCHHHHHHHHCCCEEEECHHEEEEEECCCHHHHHHHHHHHHHCCEECCC ADFSLSNYEIPNLIAFDNKNARLAFGVSSNQAIDKVDRLELTGDAVTLSGSLMSGTGLGS CCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHEEECCCEEEEECCEECCCCCCC TGGLEKGFNQGVQVAEASDFSVDFAMTLRGSQSISALPLGEQTLINIHADWPHPSFKGLL CCCCHHHHHHCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC PAERDINAQGFTASWNISHLTRNYPQEFIKSNQSSLTEVSANAILFEPVTHYGKIERSVK CCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHHHH YGLLFIVLTFIMLFIFELGQKTSLSTIQYVLVGSAMALFYLLLLSLSEHLAFLHAYLIAA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CIPVLSVSAYVGSATTSIKRGGIVGIMLVSLYAVLYSILQLEDYALLMGTGLLLVVLLIL HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFVTRHQPKNTA HHHHCCCCCCCC >Mature Secondary Structure MFNIIVGVIALFTLALFGGAAYLVVRALLKKFNRDQGIDMESPQAQSSHSKGTPLAKNTT CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LLKALTIGILSILAMIPLGIIMDMTSDREALYHSVVDEIGRSWGEQQTLSGPVLVIPYSY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHH FVMQEEVSADGKNRHQVKRTYQDELVILPKKLKLDLDLKHDFRTRGIYQSLVYNATLQGK HHHHHHHCCCCCCHHHHHHHHCCCEEEECHHEEEEEECCCHHHHHHHHHHHHHCCEECCC ADFSLSNYEIPNLIAFDNKNARLAFGVSSNQAIDKVDRLELTGDAVTLSGSLMSGTGLGS CCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHEEECCCEEEEECCEECCCCCCC TGGLEKGFNQGVQVAEASDFSVDFAMTLRGSQSISALPLGEQTLINIHADWPHPSFKGLL CCCCHHHHHHCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC PAERDINAQGFTASWNISHLTRNYPQEFIKSNQSSLTEVSANAILFEPVTHYGKIERSVK CCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHHHH YGLLFIVLTFIMLFIFELGQKTSLSTIQYVLVGSAMALFYLLLLSLSEHLAFLHAYLIAA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CIPVLSVSAYVGSATTSIKRGGIVGIMLVSLYAVLYSILQLEDYALLMGTGLLLVVLLIL HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFVTRHQPKNTA HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]