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The map label for this gene is ytfE [C]

Identifier: 160877187

GI number: 160877187

Start: 4817379

End: 4818188

Strand: Direct

Name: ytfE [C]

Synonym: Sbal195_4083

Alternate gene names: 160877187

Gene position: 4817379-4818188 (Clockwise)

Preceding gene: 160877186

Following gene: 160877188

Centisome position: 90.09

GC content: 46.67

Gene sequence:

>810_bases
ATGTCTGCTACTTCTACCCCAAAAGATGCACAAGCCACTGGCCATGGAGTGGATTCTCAACCTCGCCATGATGCACAACT
TGGTCAAGGTTTTCCGCTTAGTGAGAGCGCTCAGGATAACCACTGGCTAGAACGAAAAGTCGGTGAGTTAGTTGCCGAAG
ATTTTCGCCGTGCCCATGTGTTTAGCCAATTCGGTATCGATTTTTGTTGTGGAGGCGGTAAACCGCTGGCGGTTGCCTGT
GAACGCGCAGACATAGATCCCGCAAAAGTGGTTGCTGCGCTGAATGCCGTCACACTGACCGGCAGCAAAGAAGATGAGTT
GAATCAATTACCCTTAGATCAACTTGTCGATTATATCGAGTCGACACATCATCAATACGTGCGCGAAAAAGCGCCATTAT
TAGTCGAATATTCTGAGAAAATGGTCCGCGCCCATGGTGAGCACTATGCCGAAATTATTCCCTTTGCGGGTTGGGTGCGC
GCTTTAGTTGAAGACCTGATGCCGCATTTAATGAAAGAAGAAAAAATACTGTTTCCGGCGATCCGCGGCTTAAGTCAAGC
AGAGCACATTGAAACTTGCTTTGGTCATATTGGTAATCCCATCAATGCGATGCAACATGAGCATGAAGAAGTCGGTTTAA
TTTTGCAAAAATTACGCGAGCTCACGAACGACTTCACGCCACCGGAACATGCTTGCACTACGTGGCTAGTGTGTTATGCC
ACACTAGCGGAGTTTGAGACCGACTTACATCAGCATATTCACTTAGAAAACAATATTCTATTTCCTAAGGCATTAGGTCT
CGCTCAATAA

Upstream 100 bases:

>100_bases
CATCATCAGCAAATCCTGAGTATTTTAGTCGGGTTTAGTTGCCACGCATTAAAGCTGCAAATAATATGAATGTAAATTTA
TTGCTGCTTTGGAGCTATTT

Downstream 100 bases:

>100_bases
TCAATTGAATATTGCTGCTGTGATGCCCCTGAATTACGGATCATCCGCAGAATCTTGAGGCCGGACCTAAGTCTGGCCTT
TCAATTGTTGACGTGCTACA

Product: hemerythrin HHE cation-binding domain-containing protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSATSTPKDAQATGHGVDSQPRHDAQLGQGFPLSESAQDNHWLERKVGELVAEDFRRAHVFSQFGIDFCCGGGKPLAVAC
ERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVR
ALVEDLMPHLMKEEKILFPAIRGLSQAEHIETCFGHIGNPINAMQHEHEEVGLILQKLRELTNDFTPPEHACTTWLVCYA
TLAEFETDLHQHIHLENNILFPKALGLAQ

Sequences:

>Translated_269_residues
MSATSTPKDAQATGHGVDSQPRHDAQLGQGFPLSESAQDNHWLERKVGELVAEDFRRAHVFSQFGIDFCCGGGKPLAVAC
ERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVR
ALVEDLMPHLMKEEKILFPAIRGLSQAEHIETCFGHIGNPINAMQHEHEEVGLILQKLRELTNDFTPPEHACTTWLVCYA
TLAEFETDLHQHIHLENNILFPKALGLAQ
>Mature_268_residues
SATSTPKDAQATGHGVDSQPRHDAQLGQGFPLSESAQDNHWLERKVGELVAEDFRRAHVFSQFGIDFCCGGGKPLAVACE
RADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIESTHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRA
LVEDLMPHLMKEEKILFPAIRGLSQAEHIETCFGHIGNPINAMQHEHEEVGLILQKLRELTNDFTPPEHACTTWLVCYAT
LAEFETDLHQHIHLENNILFPKALGLAQ

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=227, Percent_Identity=35.6828193832599, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 30037; Mature: 29906

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSTPKDAQATGHGVDSQPRHDAQLGQGFPLSESAQDNHWLERKVGELVAEDFRRAHV
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FSQFGIDFCCGGGKPLAVACERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIE
HHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
STHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRALVEDLMPHLMKEEKILFPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGLSQAEHIETCFGHIGNPINAMQHEHEEVGLILQKLRELTNDFTPPEHACTTWLVCYA
HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLAEFETDLHQHIHLENNILFPKALGLAQ
HHHHHHHHHHHHHHHCCCEECHHHHCCCC
>Mature Secondary Structure 
SATSTPKDAQATGHGVDSQPRHDAQLGQGFPLSESAQDNHWLERKVGELVAEDFRRAHV
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FSQFGIDFCCGGGKPLAVACERADIDPAKVVAALNAVTLTGSKEDELNQLPLDQLVDYIE
HHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCCHHHHCCCHHHHHHHHH
STHHQYVREKAPLLVEYSEKMVRAHGEHYAEIIPFAGWVRALVEDLMPHLMKEEKILFPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRGLSQAEHIETCFGHIGNPINAMQHEHEEVGLILQKLRELTNDFTPPEHACTTWLVCYA
HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLAEFETDLHQHIHLENNILFPKALGLAQ
HHHHHHHHHHHHHHHCCCEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA