| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfbS [C]
Identifier: 160877134
GI number: 160877134
Start: 4739779
End: 4741179
Strand: Reverse
Name: yfbS [C]
Synonym: Sbal195_4030
Alternate gene names: 160877134
Gene position: 4741179-4739779 (Counterclockwise)
Preceding gene: 160877138
Following gene: 160877132
Centisome position: 88.67
GC content: 47.75
Gene sequence:
>1401_bases ATGTCATCAACAGATTCAAGCACTGTTCCACCTAACAAAGCTCCGGTCAGCGAGGGGCTCGATAAAAAGAAAATGCTGAT CCTAGCGGCGGATATTGTGCTGTTATTTGCACTCTATTACGGCTTACCTTTCGAACAAGGGGTGAACACGGGTCTGGCGA TTCTGGTTTTCGCTGGCATTCTTTGGTTGACCGAAGCAATCCACATCAGTATCACTGCGATTCTCGTGCCTATACTTGCC GTATTCTTTGGGGTGTTTGAAACCAAGGAAGCAATGAGTAGCTTTGCTAATCCCATCATTTATTTATTCTTCGGTGGCTT CGTTCTGGCTGCGGCCTTGCACCATCAAAAGATTGATACCTTAATCGCACAAAAGTTGTTGTTAGCCTCTAAGGGCAAAC TCAGTATCGCTTGCTTTATGCTGTTCGGGGTAACGGCGCTGCTCTCAATGTGGATCAGTAATACCGCCACCACGGCGATG ATGTTGCCATTGGCTCTCGGGATTTTGCAGCAACTAGATCGTGACAAATATCACAGCACGTATGTTTTCTTACTGCTCGG GATTGCCTATTCGGCCAACATCGGCGGTATCGGTACTTTAGTGGGCAGCCCACCGAATGCGATTGCTGCGGCGCAAGTTG GCTTGAGTTTTAGTGACTGGCTCAAGTTTGGTATTCCGACCGTTATCCTCATGTTGCCGTTAATGTTGATTGCCTTGTAT TGGTATTTTAAGCCGGATCTTTCTGCCAAGTTCGATGTGCAAGTTGAAGCGCAGAAGCTGACGTTCCAAGGTAAATTCAC CCTGCTTATCTTCCTCGCGACAGTATGTTGCTGGATTTTCAGTGTGCCATTAGCTAAAGCATTAGGTGGCATTACTCAGT TCGATACCATAGTAGCGTTAGGCGCGGTTGTTTTGCTCGCGGGCTTAGGCTTAGTCGGTTGGAAGAAGATTGAATCGACC ACAGATTGGGGTGTACTAATACTGTTTGGCGGCGGTTTAACGCTAAGCGCAGTGTTGAAAACCACAGGTACTAGTGTGTT TTTAGCCCACTGGATGACAGATATTTTCGGCAGTACGCACATGTCGTTGTTCGTCTTTGCAGTGATTGCCTTTGTGGTGA TGCTGACCGAGTTTGCCAGTAACACCGCCAGTGCCGCACTGTTAGTGCCTGTATTTGCTGCAATTGCCGAGGCATTAGGC GTATCGCCTGTGATGTTATCTGTGCTGATTGGTATTGCCGCATCCTGCGCCTTTATGCTGCCAGTGGCGACGCCGCCCAA TGCGATCGTTTATGGTTCTGGCCATATCAAGCAATCGGAAATGGTGCGAGTAGGTATGATCATCAACTTTATCAGCATGA TAGTGCTAGGCATTATCGCCCATGTTTTTTGGGATATCTGA
Upstream 100 bases:
>100_bases TGTTGTTGCTGGGTGATAAAATTACAAAATAAACCGCTTTGCCAAGTGTGATCTATGCCCTAAATTTGCGTCAAAATAAA ATGGTATTAAGGTTGTAACC
Downstream 100 bases:
>100_bases TGTCAGTAGATTGAGATCCACGTAAAACAAAATACCCAGCGAGTCTGGGTATTTTTATGGGAGCGAAATAGTTATCTGCG ATTAACTATGGCTTTTTAAC
Product: anion transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILA VFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAM MLPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIEST TDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALG VSPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI
Sequences:
>Translated_466_residues MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILA VFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAM MLPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIEST TDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALG VSPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI >Mature_465_residues SSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILAV FFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMM LPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALYW YFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIESTT DWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGV SPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]
Homologues:
Organism=Homo sapiens, GI29171306, Length=499, Percent_Identity=27.4549098196393, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI4506979, Length=515, Percent_Identity=26.7961165048544, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI225637549, Length=468, Percent_Identity=27.3504273504274, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI225637552, Length=468, Percent_Identity=27.3504273504274, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI19923838, Length=348, Percent_Identity=28.448275862069, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI301069349, Length=338, Percent_Identity=27.5147928994083, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI31795546, Length=351, Percent_Identity=26.7806267806268, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI219802232, Length=445, Percent_Identity=24.7191011235955, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI31377715, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI58761541, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI301069346, Length=151, Percent_Identity=37.0860927152318, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI301069353, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=4e-21, Organism=Escherichia coli, GI1788629, Length=163, Percent_Identity=31.9018404907975, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71988385, Length=460, Percent_Identity=30.2173913043478, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI32565804, Length=456, Percent_Identity=30.2631578947368, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI71989118, Length=500, Percent_Identity=27.8, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17551790, Length=508, Percent_Identity=24.6062992125984, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32564681, Length=520, Percent_Identity=22.5, Blast_Score=129, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6324340, Length=407, Percent_Identity=25.7985257985258, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6322263, Length=396, Percent_Identity=26.5151515151515, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319885, Length=454, Percent_Identity=25.3303964757709, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI281362114, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI281362112, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI281362116, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI45551633, Length=136, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI281366409, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI17737623, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24666468, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 [H]
Pfam domain/function: PF00939 Na_sulph_symp [H]
EC number: NA
Molecular weight: Translated: 49789; Mature: 49658
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS01271 NA_SULFATE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGI CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH LWLTEAIHISITAILVPILAVFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMMLPLALGILQQLDRDKYHST HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVAL HHHCCCCCCEEEEEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAVVLLAGLGLVGWKKIESTTDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTH HHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHH MSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGVSPVMLSVLIGIAASCAFML HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE PVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGI CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH LWLTEAIHISITAILVPILAVFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMMLPLALGILQQLDRDKYHST HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVAL HHHCCCCCCEEEEEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GAVVLLAGLGLVGWKKIESTTDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTH HHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHH MSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGVSPVMLSVLIGIAASCAFML HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE PVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]