Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is yfbS [C]

Identifier: 160877134

GI number: 160877134

Start: 4739779

End: 4741179

Strand: Reverse

Name: yfbS [C]

Synonym: Sbal195_4030

Alternate gene names: 160877134

Gene position: 4741179-4739779 (Counterclockwise)

Preceding gene: 160877138

Following gene: 160877132

Centisome position: 88.67

GC content: 47.75

Gene sequence:

>1401_bases
ATGTCATCAACAGATTCAAGCACTGTTCCACCTAACAAAGCTCCGGTCAGCGAGGGGCTCGATAAAAAGAAAATGCTGAT
CCTAGCGGCGGATATTGTGCTGTTATTTGCACTCTATTACGGCTTACCTTTCGAACAAGGGGTGAACACGGGTCTGGCGA
TTCTGGTTTTCGCTGGCATTCTTTGGTTGACCGAAGCAATCCACATCAGTATCACTGCGATTCTCGTGCCTATACTTGCC
GTATTCTTTGGGGTGTTTGAAACCAAGGAAGCAATGAGTAGCTTTGCTAATCCCATCATTTATTTATTCTTCGGTGGCTT
CGTTCTGGCTGCGGCCTTGCACCATCAAAAGATTGATACCTTAATCGCACAAAAGTTGTTGTTAGCCTCTAAGGGCAAAC
TCAGTATCGCTTGCTTTATGCTGTTCGGGGTAACGGCGCTGCTCTCAATGTGGATCAGTAATACCGCCACCACGGCGATG
ATGTTGCCATTGGCTCTCGGGATTTTGCAGCAACTAGATCGTGACAAATATCACAGCACGTATGTTTTCTTACTGCTCGG
GATTGCCTATTCGGCCAACATCGGCGGTATCGGTACTTTAGTGGGCAGCCCACCGAATGCGATTGCTGCGGCGCAAGTTG
GCTTGAGTTTTAGTGACTGGCTCAAGTTTGGTATTCCGACCGTTATCCTCATGTTGCCGTTAATGTTGATTGCCTTGTAT
TGGTATTTTAAGCCGGATCTTTCTGCCAAGTTCGATGTGCAAGTTGAAGCGCAGAAGCTGACGTTCCAAGGTAAATTCAC
CCTGCTTATCTTCCTCGCGACAGTATGTTGCTGGATTTTCAGTGTGCCATTAGCTAAAGCATTAGGTGGCATTACTCAGT
TCGATACCATAGTAGCGTTAGGCGCGGTTGTTTTGCTCGCGGGCTTAGGCTTAGTCGGTTGGAAGAAGATTGAATCGACC
ACAGATTGGGGTGTACTAATACTGTTTGGCGGCGGTTTAACGCTAAGCGCAGTGTTGAAAACCACAGGTACTAGTGTGTT
TTTAGCCCACTGGATGACAGATATTTTCGGCAGTACGCACATGTCGTTGTTCGTCTTTGCAGTGATTGCCTTTGTGGTGA
TGCTGACCGAGTTTGCCAGTAACACCGCCAGTGCCGCACTGTTAGTGCCTGTATTTGCTGCAATTGCCGAGGCATTAGGC
GTATCGCCTGTGATGTTATCTGTGCTGATTGGTATTGCCGCATCCTGCGCCTTTATGCTGCCAGTGGCGACGCCGCCCAA
TGCGATCGTTTATGGTTCTGGCCATATCAAGCAATCGGAAATGGTGCGAGTAGGTATGATCATCAACTTTATCAGCATGA
TAGTGCTAGGCATTATCGCCCATGTTTTTTGGGATATCTGA

Upstream 100 bases:

>100_bases
TGTTGTTGCTGGGTGATAAAATTACAAAATAAACCGCTTTGCCAAGTGTGATCTATGCCCTAAATTTGCGTCAAAATAAA
ATGGTATTAAGGTTGTAACC

Downstream 100 bases:

>100_bases
TGTCAGTAGATTGAGATCCACGTAAAACAAAATACCCAGCGAGTCTGGGTATTTTTATGGGAGCGAAATAGTTATCTGCG
ATTAACTATGGCTTTTTAAC

Product: anion transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILA
VFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAM
MLPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY
WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIEST
TDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALG
VSPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI

Sequences:

>Translated_466_residues
MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILA
VFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAM
MLPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY
WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIEST
TDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALG
VSPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI
>Mature_465_residues
SSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGILWLTEAIHISITAILVPILAV
FFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDTLIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMM
LPLALGILQQLDRDKYHSTYVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALYW
YFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVALGAVVLLAGLGLVGWKKIESTT
DWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTHMSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGV
SPVMLSVLIGIAASCAFMLPVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=499, Percent_Identity=27.4549098196393, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI4506979, Length=515, Percent_Identity=26.7961165048544, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI225637549, Length=468, Percent_Identity=27.3504273504274, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI225637552, Length=468, Percent_Identity=27.3504273504274, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI19923838, Length=348, Percent_Identity=28.448275862069, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI301069349, Length=338, Percent_Identity=27.5147928994083, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI31795546, Length=351, Percent_Identity=26.7806267806268, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI219802232, Length=445, Percent_Identity=24.7191011235955, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI31377715, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI58761541, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI301069346, Length=151, Percent_Identity=37.0860927152318, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI301069353, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI1788629, Length=163, Percent_Identity=31.9018404907975, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71988385, Length=460, Percent_Identity=30.2173913043478, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI32565804, Length=456, Percent_Identity=30.2631578947368, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI71989118, Length=500, Percent_Identity=27.8, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17551790, Length=508, Percent_Identity=24.6062992125984, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32564681, Length=520, Percent_Identity=22.5, Blast_Score=129, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6324340, Length=407, Percent_Identity=25.7985257985258, Blast_Score=106, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6322263, Length=396, Percent_Identity=26.5151515151515, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319885, Length=454, Percent_Identity=25.3303964757709, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI281362114, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281362112, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281362116, Length=202, Percent_Identity=26.7326732673267, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45551633, Length=136, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281366409, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17737623, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24666468, Length=136, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 49789; Mature: 49658

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGI
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
LWLTEAIHISITAILVPILAVFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMMLPLALGILQQLDRDKYHST
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY
HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVAL
HHHCCCCCCEEEEEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GAVVLLAGLGLVGWKKIESTTDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTH
HHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHH
MSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGVSPVMLSVLIGIAASCAFML
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE
PVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI
ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSTDSSTVPPNKAPVSEGLDKKKMLILAADIVLLFALYYGLPFEQGVNTGLAILVFAGI
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
LWLTEAIHISITAILVPILAVFFGVFETKEAMSSFANPIIYLFFGGFVLAAALHHQKIDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LIAQKLLLASKGKLSIACFMLFGVTALLSMWISNTATTAMMLPLALGILQQLDRDKYHST
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YVFLLLGIAYSANIGGIGTLVGSPPNAIAAAQVGLSFSDWLKFGIPTVILMLPLMLIALY
HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYFKPDLSAKFDVQVEAQKLTFQGKFTLLIFLATVCCWIFSVPLAKALGGITQFDTIVAL
HHHCCCCCCEEEEEEEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GAVVLLAGLGLVGWKKIESTTDWGVLILFGGGLTLSAVLKTTGTSVFLAHWMTDIFGSTH
HHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCHH
MSLFVFAVIAFVVMLTEFASNTASAALLVPVFAAIAEALGVSPVMLSVLIGIAASCAFML
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE
PVATPPNAIVYGSGHIKQSEMVRVGMIINFISMIVLGIIAHVFWDI
ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]