| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is torT [C]
Identifier: 160877116
GI number: 160877116
Start: 4721799
End: 4722128
Strand: Direct
Name: torT [C]
Synonym: Sbal195_4012
Alternate gene names: 160877116
Gene position: 4721799-4722128 (Clockwise)
Preceding gene: 160877111
Following gene: 160877117
Centisome position: 88.3
GC content: 50.3
Gene sequence:
>330_bases ATGCTTAGTTCACTGTTCACTTACCATGATGAGCCTATGCACTTGACTGCATTCTTCGCCCGTTCCCTCAGGATTTGCCT CCTCTTAACCCTCAGTAGTTTCGTCTTTGCAGTGCAGGCAGCTTGGTATCCCGCCGATGTCATTGCCGACGGTCAAAAGA CCCTCTACACGCCACTCACTAAGGCCAATAAAGCATGGCGGATCTGCGCCTTACTTCCCCACGGTAAAGATCAATATTGG TGGGGCGTCGCCTTTGGATTATCACAAGAAGCCGAGCGCCAAGGCGTAACGCTTGGCATTTATGATGCTGGTGGATATGA CAAGATTTAG
Upstream 100 bases:
>100_bases ATCTTTGCGACCAAACCATAACAGTACTGCTTTACGCTTGTTATTAAACAATAAATTAGCTTTATTTAACTATGATTAAG CAACTACGGATCCTTGTTCT
Downstream 100 bases:
>100_bases CAGCAAAAACAGCAACTCCATGATTGTTATGCACTCAAGGCTCAAGCTTATATTATTGCCGCCAATACCGCTGACGGACT GATTGCGGATATTGAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MLSSLFTYHDEPMHLTAFFARSLRICLLLTLSSFVFAVQAAWYPADVIADGQKTLYTPLTKANKAWRICALLPHGKDQYW WGVAFGLSQEAERQGVTLGIYDAGGYDKI
Sequences:
>Translated_109_residues MLSSLFTYHDEPMHLTAFFARSLRICLLLTLSSFVFAVQAAWYPADVIADGQKTLYTPLTKANKAWRICALLPHGKDQYW WGVAFGLSQEAERQGVTLGIYDAGGYDKI >Mature_109_residues MLSSLFTYHDEPMHLTAFFARSLRICLLLTLSSFVFAVQAAWYPADVIADGQKTLYTPLTKANKAWRICALLPHGKDQYW WGVAFGLSQEAERQGVTLGIYDAGGYDKI
Specific function: Upon Binding A Putative Inducer It Probably Interacts With Tors And Allows It To Play A Role In The Induction Of The Torcad Operon For Trimethylamine N-Oxide Reductase. [C]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12248; Mature: 12248
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSLFTYHDEPMHLTAFFARSLRICLLLTLSSFVFAVQAAWYPADVIADGQKTLYTPLT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEECCCC KANKAWRICALLPHGKDQYWWGVAFGLSQEAERQGVTLGIYDAGGYDKI CCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MLSSLFTYHDEPMHLTAFFARSLRICLLLTLSSFVFAVQAAWYPADVIADGQKTLYTPLT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEECCCC KANKAWRICALLPHGKDQYWWGVAFGLSQEAERQGVTLGIYDAGGYDKI CCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA