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The map label for this gene is nosD [H]

Identifier: 160877099

GI number: 160877099

Start: 4705027

End: 4706322

Strand: Reverse

Name: nosD [H]

Synonym: Sbal195_3995

Alternate gene names: 160877099

Gene position: 4706322-4705027 (Counterclockwise)

Preceding gene: 160877100

Following gene: 160877098

Centisome position: 88.01

GC content: 45.6

Gene sequence:

>1296_bases
GTGAAAATGAAGCTGCGTCCACTCCTGTTTTGGTTGCTGTACATTACTTCTTTTAATAGTTGGGCGGCACTGATCCGGGT
GACAGACACAGATGCGCTTACACTTGCCCTTAGTAAGGCTCAAAATGGTGACACGTTATTGCTGGCTAATGGCGTGTATA
CCGGCTCTTTTCGAGTCACTCAATCCATTAATTTACAAGGCGAAGTTGGCGCTACCTTAGATGCACAGTATCAAGGTAGT
GCGCTGATTGTTACCGCGGCGAAGGTGAGGATTGAGGGGCTTAATATTCGGCATTGGGGGAAGGATCTCTATTACCGCGA
TGCGGGGATCTTGCTGCAACAAGGAGCGGATAAAGTACAAATTAAAGAAAATCATTTTGTAGGTGATGGCTTTGGTATTT
ATGGTGAGCAAATCTATGCCCCTGAGATCGTAGGTAATAGTATCAGCGGCAACGGTGCTATGTATGTGTTAGACAGAGGG
GATGGCATTTATCTTAAGCAGGTCGTTGCCCCGCAAATCCATAAAAACCAGCTCATTTTTGTCCGCGATGGGGTGTATTT
AGAGTCAGTCACCCGCAGCCGCATTTCTGAAAATCAATTTACTAAACTGCAATACGGCATTCACTACATGTATACCCAAG
CCGATGAAGCATGGCAAAACCAAGCTATTGCGGTTGATGGTGGCTATGCCTTAATGAATTCAACGAATATTTACCTGCAC
CACAACCGCGTGACTCAGGCTCGGGACTTCGGCATTTTGCTCAATATTACTGAGTCTTCCCATGTGCAGGCCAATGTTGC
CAGTGACATCCATAATCCTAAGGGCACAGTGGAGTTGGGTAATGAGGGCAAAGGTATTTTTATTTATGCTGCTCAAAAGA
ATCGTATTGAAGATAACGAGTTTAGCCAAAGTGATACTGGGATCAGTATGGCCATGGGCGGAGAGAAAAACCGTCTTTGG
CATAATCGAATTATTGCGAATCAAACCCAAGTGAAATATGTCGGTGACACACAGTTAGAGTGGAGTTATCAGGGACAAGG
CAACTATTGGTCCGAATACCAAGGCTGGGATCTGAATCTAGATGGGGTTGGCGATCTGGCCCACAGACCCAATGACAGCT
TAGACAAACTATTTTGGCTTTATCCTGAAGCAAAACTGTTAATGGAAAGTCCAGTTGTTTTACTGCTGCGTTGGGTTGAA
CGCCAATTTCAACCCCAAATGACGACGGGGATTAGCGATAGTTTTCCCTTAATGCAATCGGTCTCGCCCGCACTTATTGA
TGGAGGTCCGCAATGA

Upstream 100 bases:

>100_bases
ACTAAGGCTGCAGCCGAAGCTTTTGCCACAGAATACGGCGGCCGAGTTTTGGCCTTCAACGAGATTACCCTAGAACTGCT
CGCAGGTGATAAGTAAGGCT

Downstream 100 bases:

>100_bases
ATCAGACTTTCACATTCTCGACGAATAAGCCTGTGGCTAGTGCTGATATTGCCGTTAAAGCGATAAATGTCAGTAAGTTT
TATAACAACTTTAAGGCATT

Product: periplasmic copper-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKMKLRPLLFWLLYITSFNSWAALIRVTDTDALTLALSKAQNGDTLLLANGVYTGSFRVTQSINLQGEVGATLDAQYQGS
ALIVTAAKVRIEGLNIRHWGKDLYYRDAGILLQQGADKVQIKENHFVGDGFGIYGEQIYAPEIVGNSISGNGAMYVLDRG
DGIYLKQVVAPQIHKNQLIFVRDGVYLESVTRSRISENQFTKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTNIYLH
HNRVTQARDFGILLNITESSHVQANVASDIHNPKGTVELGNEGKGIFIYAAQKNRIEDNEFSQSDTGISMAMGGEKNRLW
HNRIIANQTQVKYVGDTQLEWSYQGQGNYWSEYQGWDLNLDGVGDLAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTTGISDSFPLMQSVSPALIDGGPQ

Sequences:

>Translated_431_residues
MKMKLRPLLFWLLYITSFNSWAALIRVTDTDALTLALSKAQNGDTLLLANGVYTGSFRVTQSINLQGEVGATLDAQYQGS
ALIVTAAKVRIEGLNIRHWGKDLYYRDAGILLQQGADKVQIKENHFVGDGFGIYGEQIYAPEIVGNSISGNGAMYVLDRG
DGIYLKQVVAPQIHKNQLIFVRDGVYLESVTRSRISENQFTKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTNIYLH
HNRVTQARDFGILLNITESSHVQANVASDIHNPKGTVELGNEGKGIFIYAAQKNRIEDNEFSQSDTGISMAMGGEKNRLW
HNRIIANQTQVKYVGDTQLEWSYQGQGNYWSEYQGWDLNLDGVGDLAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTTGISDSFPLMQSVSPALIDGGPQ
>Mature_431_residues
MKMKLRPLLFWLLYITSFNSWAALIRVTDTDALTLALSKAQNGDTLLLANGVYTGSFRVTQSINLQGEVGATLDAQYQGS
ALIVTAAKVRIEGLNIRHWGKDLYYRDAGILLQQGADKVQIKENHFVGDGFGIYGEQIYAPEIVGNSISGNGAMYVLDRG
DGIYLKQVVAPQIHKNQLIFVRDGVYLESVTRSRISENQFTKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTNIYLH
HNRVTQARDFGILLNITESSHVQANVASDIHNPKGTVELGNEGKGIFIYAAQKNRIEDNEFSQSDTGISMAMGGEKNRLW
HNRIIANQTQVKYVGDTQLEWSYQGQGNYWSEYQGWDLNLDGVGDLAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVE
RQFQPQMTTGISDSFPLMQSVSPALIDGGPQ

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 48283; Mature: 48283

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKLRPLLFWLLYITSFNSWAALIRVTDTDALTLALSKAQNGDTLLLANGVYTGSFRVT
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEECCEEECEEEEE
QSINLQGEVGATLDAQYQGSALIVTAAKVRIEGLNIRHWGKDLYYRDAGILLQQGADKVQ
EEEEECCCCCCEEECCCCCCEEEEEEEEEEEEEEEEEECCCCEEEECCCEEEECCCCEEE
IKENHFVGDGFGIYGEQIYAPEIVGNSISGNGAMYVLDRGDGIYLKQVVAPQIHKNQLIF
EECCEEECCCCCCCCCEEECHHHCCCCCCCCCEEEEEECCCCEEEEEHHCCCCCCCEEEE
VRDGVYLESVTRSRISENQFTKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTNIYLH
EECCEEEHHHHHHHCCCCCCEEEEECEEEEEECCCHHHCCCEEEEECCEEEEECCEEEEE
HNRVTQARDFGILLNITESSHVQANVASDIHNPKGTVELGNEGKGIFIYAAQKNRIEDNE
ECCCCCCCCCEEEEEECCCCCEEEEHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCC
FSQSDTGISMAMGGEKNRLWHNRIIANQTQVKYVGDTQLEWSYQGQGNYWSEYQGWDLNL
CCCCCCCEEEEECCCCCCEEHHHEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCEECC
DGVGDLAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVERQFQPQMTTGISDSFPLMQS
CCCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHC
VSPALIDGGPQ
CCCCEECCCCC
>Mature Secondary Structure
MKMKLRPLLFWLLYITSFNSWAALIRVTDTDALTLALSKAQNGDTLLLANGVYTGSFRVT
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEECCEEECEEEEE
QSINLQGEVGATLDAQYQGSALIVTAAKVRIEGLNIRHWGKDLYYRDAGILLQQGADKVQ
EEEEECCCCCCEEECCCCCCEEEEEEEEEEEEEEEEEECCCCEEEECCCEEEECCCCEEE
IKENHFVGDGFGIYGEQIYAPEIVGNSISGNGAMYVLDRGDGIYLKQVVAPQIHKNQLIF
EECCEEECCCCCCCCCEEECHHHCCCCCCCCCEEEEEECCCCEEEEEHHCCCCCCCEEEE
VRDGVYLESVTRSRISENQFTKLQYGIHYMYTQADEAWQNQAIAVDGGYALMNSTNIYLH
EECCEEEHHHHHHHCCCCCCEEEEECEEEEEECCCHHHCCCEEEEECCEEEEECCEEEEE
HNRVTQARDFGILLNITESSHVQANVASDIHNPKGTVELGNEGKGIFIYAAQKNRIEDNE
ECCCCCCCCCEEEEEECCCCCEEEEHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCC
FSQSDTGISMAMGGEKNRLWHNRIIANQTQVKYVGDTQLEWSYQGQGNYWSEYQGWDLNL
CCCCCCCEEEEECCCCCCEEHHHEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCEECC
DGVGDLAHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVERQFQPQMTTGISDSFPLMQS
CCCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHC
VSPALIDGGPQ
CCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]