| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877097
Identifier: 160877097
GI number: 160877097
Start: 4703121
End: 4703996
Strand: Reverse
Name: 160877097
Synonym: Sbal195_3993
Alternate gene names: NA
Gene position: 4703996-4703121 (Counterclockwise)
Preceding gene: 160877098
Following gene: 160877096
Centisome position: 87.97
GC content: 41.89
Gene sequence:
>876_bases ATGAGTCAATCAGAGGTTTGGCAGTGCGGCCATTTAAGTGCCCTAAGTATAGTGAGTACCATAGCTACCAAGGAGTTTAA GGACAATTTGCGTAATCGATGGTTATGGATGATGGCGGGCATATTGCTGCTGCTTTCCCTCAGCGTGAGCTTTATGGGTA GCGTAATATCGGGCAGCTTAGTGATACTTGAGCCTGCGCAGATCCTTTCTGGGCTTGTTACTTTATCGGTATTTATGCTG CCATTAGGTGCGATCTTGTTGAGTTATGACAGCTTTGTTGGTGAGAAAGAATCTGGCACTTTATTGTTATTACTAACCTA TCCATTGGAGCGTTGGCATCTTGTCTGCGGCAAGTTTTTGGGCCATGCGTGCGTGATGGCTATCGCCTGTATCTTAGGTT TTGGTTTGACTGGATTATTACTGATACTACTTGGCGATGCTCAGGCTCAATTCGCGATAGTTATCGGATTTATCCATTTG ATAATAAGTAGTATTTTGCTGTCATTAGTGTTTGTTCTATTGGGGTATTGGGTTAGTTTGTGTGTGCGAGAAAAAGCTAA GGCATTGGGGATGTTACTTATTTTATGGTTTGTGCTCGTGCTAGTTTATGATCTTATTTTGCTCAGTGTTTTGGTTGGAA TGAGTGAAATGCTTAATCGCAATCTATTTAATCTACTCATTCTATTGAACCCTACCGACTTGTTTCGTGCCTTAAATTTG CTTGCCACATCGTCGGATACACTAGCAGCTAAAAGTAGCCTTTCCTTAATCGCGCAAACTGGATTGGGATTACCTATGAT GTATGGTTTGTTAGGCGGCTGGATTATTGTTCTATTATTGGGGTGCTCTTGGGTCTTCAAACGTCAAGAAATTTAG
Upstream 100 bases:
>100_bases ACTATATGGAAACCGTTTGTCATTCTCAGCCTCAGGTTTTATCTACAGATACCATGCAAGTAACACATATGGCTCAAGGC GTTAAGTGGGAGGCCGCCGT
Downstream 100 bases:
>100_bases TTTAGCAAATTCTGTATTAGTCTAATTTTGTGCTTATTAAACAATAACTAAACTGAGTATGTAGTCACAGTATTTTATGT TGTTAAAAAGTAAAATAAAC
Product: copper ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSQSEVWQCGHLSALSIVSTIATKEFKDNLRNRWLWMMAGILLLLSLSVSFMGSVISGSLVILEPAQILSGLVTLSVFML PLGAILLSYDSFVGEKESGTLLLLLTYPLERWHLVCGKFLGHACVMAIACILGFGLTGLLLILLGDAQAQFAIVIGFIHL IISSILLSLVFVLLGYWVSLCVREKAKALGMLLILWFVLVLVYDLILLSVLVGMSEMLNRNLFNLLILLNPTDLFRALNL LATSSDTLAAKSSLSLIAQTGLGLPMMYGLLGGWIIVLLLGCSWVFKRQEI
Sequences:
>Translated_291_residues MSQSEVWQCGHLSALSIVSTIATKEFKDNLRNRWLWMMAGILLLLSLSVSFMGSVISGSLVILEPAQILSGLVTLSVFML PLGAILLSYDSFVGEKESGTLLLLLTYPLERWHLVCGKFLGHACVMAIACILGFGLTGLLLILLGDAQAQFAIVIGFIHL IISSILLSLVFVLLGYWVSLCVREKAKALGMLLILWFVLVLVYDLILLSVLVGMSEMLNRNLFNLLILLNPTDLFRALNL LATSSDTLAAKSSLSLIAQTGLGLPMMYGLLGGWIIVLLLGCSWVFKRQEI >Mature_290_residues SQSEVWQCGHLSALSIVSTIATKEFKDNLRNRWLWMMAGILLLLSLSVSFMGSVISGSLVILEPAQILSGLVTLSVFMLP LGAILLSYDSFVGEKESGTLLLLLTYPLERWHLVCGKFLGHACVMAIACILGFGLTGLLLILLGDAQAQFAIVIGFIHLI ISSILLSLVFVLLGYWVSLCVREKAKALGMLLILWFVLVLVYDLILLSVLVGMSEMLNRNLFNLLILLNPTDLFRALNLL ATSSDTLAAKSSLSLIAQTGLGLPMMYGLLGGWIIVLLLGCSWVFKRQEI
Specific function: Involved in copper processing [H]
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31803; Mature: 31672
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSEVWQCGHLSALSIVSTIATKEFKDNLRNRWLWMMAGILLLLSLSVSFMGSVISGSL CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VILEPAQILSGLVTLSVFMLPLGAILLSYDSFVGEKESGTLLLLLTYPLERWHLVCGKFL EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHH GHACVMAIACILGFGLTGLLLILLGDAQAQFAIVIGFIHLIISSILLSLVFVLLGYWVSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVREKAKALGMLLILWFVLVLVYDLILLSVLVGMSEMLNRNLFNLLILLNPTDLFRALNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECHHHHHHHHHH LATSSDTLAAKSSLSLIAQTGLGLPMMYGLLGGWIIVLLLGCSWVFKRQEI HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSEVWQCGHLSALSIVSTIATKEFKDNLRNRWLWMMAGILLLLSLSVSFMGSVISGSL CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VILEPAQILSGLVTLSVFMLPLGAILLSYDSFVGEKESGTLLLLLTYPLERWHLVCGKFL EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHH GHACVMAIACILGFGLTGLLLILLGDAQAQFAIVIGFIHLIISSILLSLVFVLLGYWVSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVREKAKALGMLLILWFVLVLVYDLILLSVLVGMSEMLNRNLFNLLILLNPTDLFRALNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECHHHHHHHHHH LATSSDTLAAKSSLSLIAQTGLGLPMMYGLLGGWIIVLLLGCSWVFKRQEI HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2170125 [H]