| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877054
Identifier: 160877054
GI number: 160877054
Start: 4653313
End: 4654275
Strand: Reverse
Name: 160877054
Synonym: Sbal195_3950
Alternate gene names: NA
Gene position: 4654275-4653313 (Counterclockwise)
Preceding gene: 160877056
Following gene: 160877052
Centisome position: 87.04
GC content: 45.38
Gene sequence:
>963_bases ATGGCAGCGATGAGTTATTTGAGTGTGATCGAGCGGTATCACGAATACGAAGCCACAGTGCATGAACTGATGGAATCGAT TTTAACGGGGATTGCCGACGCCGAGTTATTTAAACAACCTAAGGTCGATGTCAAAGCGATGAAAGGAATCGCGAAGAGCT ATCCCTTTGTCGAGCTGATGTATTTACTCGATAGCCAAGGCTTGCAGATAAGCCAAAATATCGCCGTGGTAGATCATCAG ATCGAGTTAATTCCGTTAGGTGGCAATCGCGATCGCAGCCAAAGACCCTATTTCATTAATCGTGATGAGTCCGATGGCGT GAACATTACGCGTCCCTATTTATCCAATGCCAGCGGTAATTTATGCCTTTCTGCCTCCCTAGCGATTTATCAACAGGAGC AAAAACTGGGTTATTTAGTGGTAGATGTGGACTTGACCCGTTTGATTGAATTTATGATGGGCGACAGTGCCCGGCGGCGC GTAACGCCGGCATTTAAAGCGGTTTATGGCGTTATAGTGGCGGGGTTATTTGTGCTGGTTACTGTATTACTCTGGACCGC ATTGCGGGATATTTACGGACTCTTTACGGTCGAGCGAATTGGCCAAGATCCGCTGCAACCTTTTGGGATCATTATTTTTA TGACGTTAGCTTTAGCGATTTTTGATCTCGGGAAAACCATTCTCGAAGAAGAAGTGCTAATGCATAAGGATATCTTTCGC CACAGCTCAACGCGGCGAACCATTACACGGTTTGTGTCTACCATCCTTATTGCCATTTCCATTGAGGCGTTATTGACTAT GTTCAAGGCGTCACTCGGTGAGAAACAATATATTGAACCCGCAATTTGGATGATGTTAGCCGTAGTTGGTTTACTCGTGG GATTAGGTGCTTACGTTTACTTAGGTGCTAAGGCCGAATGGTTGCTGATAAAAACGCAAGCCTATAAAAGCGGTAAAAAG TGA
Upstream 100 bases:
>100_bases TGAGCCATAAATTAGTAACTATTTGTTTAATAGTATTTTATTGATATGGCATTAAAGCTGCTTTGTTCTGGACTTAGAAA TCGGTTGATTGGAGCGAAAC
Downstream 100 bases:
>100_bases CAAGGATGATGTAGCTTTGAAGGTGGTGATTAAGAGGGCTAAACAAGGTAACACCCAGCACTGAGGGCTGGGTGAGATAT TAGGTCTGAGTGGACACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: General Glycosylation Pathway Protein PglG; Inner Membrane Protein; Cache Domain Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAAMSYLSVIERYHEYEATVHELMESILTGIADAELFKQPKVDVKAMKGIAKSYPFVELMYLLDSQGLQISQNIAVVDHQ IELIPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIYQQEQKLGYLVVDVDLTRLIEFMMGDSARRR VTPAFKAVYGVIVAGLFVLVTVLLWTALRDIYGLFTVERIGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Sequences:
>Translated_320_residues MAAMSYLSVIERYHEYEATVHELMESILTGIADAELFKQPKVDVKAMKGIAKSYPFVELMYLLDSQGLQISQNIAVVDHQ IELIPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIYQQEQKLGYLVVDVDLTRLIEFMMGDSARRR VTPAFKAVYGVIVAGLFVLVTVLLWTALRDIYGLFTVERIGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK >Mature_319_residues AAMSYLSVIERYHEYEATVHELMESILTGIADAELFKQPKVDVKAMKGIAKSYPFVELMYLLDSQGLQISQNIAVVDHQI ELIPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIYQQEQKLGYLVVDVDLTRLIEFMMGDSARRRV TPAFKAVYGVIVAGLFVLVTVLLWTALRDIYGLFTVERIGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFRH SSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35929; Mature: 35798
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMSYLSVIERYHEYEATVHELMESILTGIADAELFKQPKVDVKAMKGIAKSYPFVELM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH YLLDSQGLQISQNIAVVDHQIELIPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGN HHHCCCCCEEECCEEEEECEEEEEECCCCCCCCCCCEEECCCCCCCCEEECHHHCCCCCC LCLSASLAIYQQEQKLGYLVVDVDLTRLIEFMMGDSARRRVTPAFKAVYGVIVAGLFVLV EEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH TVLLWTALRDIYGLFTVERIGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC >Mature Secondary Structure AAMSYLSVIERYHEYEATVHELMESILTGIADAELFKQPKVDVKAMKGIAKSYPFVELM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH YLLDSQGLQISQNIAVVDHQIELIPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGN HHHCCCCCEEECCEEEEECEEEEEECCCCCCCCCCCEEECCCCCCCCEEECHHHCCCCCC LCLSASLAIYQQEQKLGYLVVDVDLTRLIEFMMGDSARRRVTPAFKAVYGVIVAGLFVLV EEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH TVLLWTALRDIYGLFTVERIGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA