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The map label for this gene is ycgG [H]

Identifier: 160877040

GI number: 160877040

Start: 4640455

End: 4642212

Strand: Direct

Name: ycgG [H]

Synonym: Sbal195_3936

Alternate gene names: 160877040

Gene position: 4640455-4642212 (Clockwise)

Preceding gene: 160877039

Following gene: 160877042

Centisome position: 86.78

GC content: 46.99

Gene sequence:

>1758_bases
ATGACAAGTTTAGATCTGGCTAAAGAGCTCGATAAGATAATTTCTAAATCGGCAATTAATCCCTTATTTCAGCCAATTTT
CAATATATTAGAACATAAGATCCACGGTTTTGAAGCCCTGAGTCGCGGCCCTGAACACAGCCCGTTATACTCTCCAGTGC
CGCTATTTCAGACAGCAGAGCATGAAGGCAAGTTAAGCGAGTTAGAAACCCTTTGTCGGCGCATTTCACTCGAGCAATTT
AAGCTGCGTCAGTTTCAAGGCAAGCTGTTTATCAATATTTCACCCAAGGCATTATTAGATCCCGCGCACCCCAAGGGCAT
GACCTTACAGCTGTTGCAACAACTCGGCATAGCGCCATCGCAGGTGGTGATTGAGCTGTCGGAGCAATATCCCGCCGATG
ATATCGACTTACTCAAATCTTGCTTGAATCATTATCGCAGCCAAGGTTTTTTAACGGCCATCGATGACTTAGGCGCAGGT
TATTCGGGTCTAAGACTCTGGTCAGAATTGTCGCCCGACTATGTCAAAATCGACCGCCACTTTATCCATGAAATTGATTC
GACCCCTGTCAAACAAGAGTTTGTCCGCTCGATTGTGGAGTTATGCCAAAGCTTAACCTGCAAAGTGATAGCCGAAGGGA
TTGAAACGCAAGAGGAATTAGCCGTACTCAAACAACTGGGTATCGTCTATTGCCAAGGCTATTTGCTAGGGCGTCCAGAA
GTGCTCCCCTGCCGCGCGATGAAAGCGACCTTAGTGCCAAACAATACTCAAATTCAACCTAGATACAGCGAATCCGCCGA
AAGCCTGTGCACGAATGCCATCACAGTGGCGCCCACACTCAAACTCAAATTTTTAAGTGACACCTTTAGCTCGCAACCCG
CACTGCAGGCGGTTGTGGTAGTCGATAATCAGTTGCCGCTAGGGATTATCAGCCGCGCGACCTTACTCGAACTTTTCAGT
ACGCCCTATGGTCGTGCCTTGCATGAAAATCATGCCGTAAGTGAAGTGATGGACCCGCAGGTTATCCAAATTGAGGCCAA
CGAACCCTTATCTACTGTGAGCCAATTGCTGACCTCAGAGACGGCCAATACAGTTGCTCAGCAGTTCATTATCCTTCGCC
GTGGCAAACTGCTCGGCATAGGCCACACCAAAGATTTACTGCAAAGGATCACAGAGCACAGAATTAAGATGGCCCGCCAC
GCGAATCCTCTGACAGACTTGCCGGGCAATGTGCCCATTCAAGAGGAATTAAAACGCCTTAAAATCCAAAAGAAACACTT
TTACCTGGCCTATTTTGATTTGTGTAACTTTAAGCCCTATAACGATATTTATGGCTTTTGTCGCGGCGATGAAGTGATTT
GTGAAGTGACTAATCTGTTACTGAAATATAAAAGTGACAATTGCTTTGTCGGCCATGTCGGCGGCGATGACTTTGTGATT
ATCAGCACCTGTGAACATATGATCAGCCGTTGCCAACGAATCCTTGCGGACTTTGAAACCCATAAGCATTTGTTTTACAG
CGCCGAGCATTGGCAAGCCCAAGAGATGCTCGCCGACGATAGACAAGGTGAAGCCTGTTACCATCAGTTGATCAGCCTGT
GCGTGGGTATCTTGCCACCAGCACTCACCTTTAACGCCAATGAACACAGCCTGTCGACCTTAAGTGCTAAGGCAAAAAAA
CAGGCAAAATCCGCGAATAACGGATTTTACCTGTTAGAAAATCACCTTGCTATCGAAACCCAAGCGCTCAGTGCTTGA

Upstream 100 bases:

>100_bases
AAAACCCCCGCATAGCTGGCGTTAAGCTCCCTAAAAATTGTCATCATTTTGTCATTTCTAAGTCATAGACTCCGCTCACA
TAGACGAAAGGGCTGACGTA

Downstream 100 bases:

>100_bases
GTCTTAAGTGACCAATTTAACGATTGAAGGATTAAAGCTGTGGGGCAATCGTCTTCTTTAACCAATCAGTCAACATTTTG
GTTTCGTAGATAAAAGGTTT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MTSLDLAKELDKIISKSAINPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPVPLFQTAEHEGKLSELETLCRRISLEQF
KLRQFQGKLFINISPKALLDPAHPKGMTLQLLQQLGIAPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAG
YSGLRLWSELSPDYVKIDRHFIHEIDSTPVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRPE
VLPCRAMKATLVPNNTQIQPRYSESAESLCTNAITVAPTLKLKFLSDTFSSQPALQAVVVVDNQLPLGIISRATLLELFS
TPYGRALHENHAVSEVMDPQVIQIEANEPLSTVSQLLTSETANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARH
ANPLTDLPGNVPIQEELKRLKIQKKHFYLAYFDLCNFKPYNDIYGFCRGDEVICEVTNLLLKYKSDNCFVGHVGGDDFVI
ISTCEHMISRCQRILADFETHKHLFYSAEHWQAQEMLADDRQGEACYHQLISLCVGILPPALTFNANEHSLSTLSAKAKK
QAKSANNGFYLLENHLAIETQALSA

Sequences:

>Translated_585_residues
MTSLDLAKELDKIISKSAINPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPVPLFQTAEHEGKLSELETLCRRISLEQF
KLRQFQGKLFINISPKALLDPAHPKGMTLQLLQQLGIAPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAG
YSGLRLWSELSPDYVKIDRHFIHEIDSTPVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRPE
VLPCRAMKATLVPNNTQIQPRYSESAESLCTNAITVAPTLKLKFLSDTFSSQPALQAVVVVDNQLPLGIISRATLLELFS
TPYGRALHENHAVSEVMDPQVIQIEANEPLSTVSQLLTSETANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARH
ANPLTDLPGNVPIQEELKRLKIQKKHFYLAYFDLCNFKPYNDIYGFCRGDEVICEVTNLLLKYKSDNCFVGHVGGDDFVI
ISTCEHMISRCQRILADFETHKHLFYSAEHWQAQEMLADDRQGEACYHQLISLCVGILPPALTFNANEHSLSTLSAKAKK
QAKSANNGFYLLENHLAIETQALSA
>Mature_584_residues
TSLDLAKELDKIISKSAINPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPVPLFQTAEHEGKLSELETLCRRISLEQFK
LRQFQGKLFINISPKALLDPAHPKGMTLQLLQQLGIAPSQVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGY
SGLRLWSELSPDYVKIDRHFIHEIDSTPVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRPEV
LPCRAMKATLVPNNTQIQPRYSESAESLCTNAITVAPTLKLKFLSDTFSSQPALQAVVVVDNQLPLGIISRATLLELFST
PYGRALHENHAVSEVMDPQVIQIEANEPLSTVSQLLTSETANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARHA
NPLTDLPGNVPIQEELKRLKIQKKHFYLAYFDLCNFKPYNDIYGFCRGDEVICEVTNLLLKYKSDNCFVGHVGGDDFVII
STCEHMISRCQRILADFETHKHLFYSAEHWQAQEMLADDRQGEACYHQLISLCVGILPPALTFNANEHSLSTLSAKAKKQ
AKSANNGFYLLENHLAIETQALSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=236, Percent_Identity=29.2372881355932, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1790496, Length=259, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1787410, Length=236, Percent_Identity=27.5423728813559, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI87082096, Length=152, Percent_Identity=33.5526315789474, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787055, Length=227, Percent_Identity=30.3964757709251, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787541, Length=214, Percent_Identity=29.9065420560748, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI87081743, Length=220, Percent_Identity=30.9090909090909, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI226510982, Length=175, Percent_Identity=33.1428571428571, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788502, Length=245, Percent_Identity=27.7551020408163, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI87081921, Length=244, Percent_Identity=26.2295081967213, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788849, Length=155, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786507, Length=149, Percent_Identity=29.5302013422819, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081980, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 65636; Mature: 65505

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLDLAKELDKIISKSAINPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPVPLFQTAE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCC
HEGKLSELETLCRRISLEQFKLRQFQGKLFINISPKALLDPAHPKGMTLQLLQQLGIAPS
CCCCHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCHHHCCCCCCCCHHHHHHHHHCCCHH
QVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGYSGLRLWSELSPDYVKIDRH
HHHEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCCCHHHHHHH
FIHEIDSTPVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRPE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCC
VLPCRAMKATLVPNNTQIQPRYSESAESLCTNAITVAPTLKLKFLSDTFSSQPALQAVVV
CCCCHHHEEEECCCCCCCCCCHHHHHHHHHHCCEEECCEEEEEEHHHHCCCCCCEEEEEE
VDNQLPLGIISRATLLELFSTPYGRALHENHAVSEVMDPQVIQIEANEPLSTVSQLLTSE
ECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEEECCCCHHHHHHHHHHH
TANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARHANPLTDLPGNVPIQEELKRL
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
KIQKKHFYLAYFDLCNFKPYNDIYGFCRGDEVICEVTNLLLKYKSDNCFVGHVGGDDFVI
HHHHHHEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEE
ISTCEHMISRCQRILADFETHKHLFYSAEHWQAQEMLADDRQGEACYHQLISLCVGILPP
HHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
ALTFNANEHSLSTLSAKAKKQAKSANNGFYLLENHLAIETQALSA
CEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHCCC
>Mature Secondary Structure 
TSLDLAKELDKIISKSAINPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPVPLFQTAE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCC
HEGKLSELETLCRRISLEQFKLRQFQGKLFINISPKALLDPAHPKGMTLQLLQQLGIAPS
CCCCHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCHHHCCCCCCCCHHHHHHHHHCCCHH
QVVIELSEQYPADDIDLLKSCLNHYRSQGFLTAIDDLGAGYSGLRLWSELSPDYVKIDRH
HHHEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCCCHHHHHHH
FIHEIDSTPVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRPE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCC
VLPCRAMKATLVPNNTQIQPRYSESAESLCTNAITVAPTLKLKFLSDTFSSQPALQAVVV
CCCCHHHEEEECCCCCCCCCCHHHHHHHHHHCCEEECCEEEEEEHHHHCCCCCCEEEEEE
VDNQLPLGIISRATLLELFSTPYGRALHENHAVSEVMDPQVIQIEANEPLSTVSQLLTSE
ECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEEECCCCHHHHHHHHHHH
TANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARHANPLTDLPGNVPIQEELKRL
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
KIQKKHFYLAYFDLCNFKPYNDIYGFCRGDEVICEVTNLLLKYKSDNCFVGHVGGDDFVI
HHHHHHEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEE
ISTCEHMISRCQRILADFETHKHLFYSAEHWQAQEMLADDRQGEACYHQLISLCVGILPP
HHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
ALTFNANEHSLSTLSAKAKKQAKSANNGFYLLENHLAIETQALSA
CEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]