Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160876970
Identifier: 160876970
GI number: 160876970
Start: 4555707
End: 4556102
Strand: Reverse
Name: 160876970
Synonym: Sbal195_3866
Alternate gene names: NA
Gene position: 4556102-4555707 (Counterclockwise)
Preceding gene: 160876971
Following gene: 160876969
Centisome position: 85.2
GC content: 48.48
Gene sequence:
>396_bases ATGACCTTTAGTTTTAATACCGAAGATGCGAGCCAAGTTTGCGTGGGGGCATTTGCGCTGGCGGTGCCCGTGGCGTTTTC AGAGGAAGCCTGGCATCTCGGCGAAACCTTGCCTGTGCTCAATCTCGCCATGCTCTTTAGTTTATCGTTGTTATTTCTAG GGGTTTTTACTTATCACAGTGTGTTCCAGCAAAATATTAGTGCCCGAGTCCCTGTGTTTATTTTCCGCATCGTGGTGGCG TATTTGCTCACCGCGCTGGTGGTTTTCCTCGTCTTGCTGTGCCTCGATAAAGTGCCATTTTTTGAAGATCCGCTGACCTC GATAAAACGGATTATCGTCATCACTATGCCAGCCTCTATGGGCGCCATTGTTGTGGATAGCTTCGATAAGGAATGA
Upstream 100 bases:
>100_bases TCGCACTTAATACTGCAGGATTAAGCCCTTATGTAGCGCGTCTTAGTCGCACGTCATTTTCGGCTAATCAAATGGATTGG AATATTAAGGAGCGATGAGC
Downstream 100 bases:
>100_bases TGCACCTTAGCCAAACCTCATGACTTTTGTCACTGGTGGATTAGGGTTATTTTGCGCATACTCATTCCCATACTCTGACT TTGATTGATGTCTAGAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTFSFNTEDASQVCVGAFALAVPVAFSEEAWHLGETLPVLNLAMLFSLSLLFLGVFTYHSVFQQNISARVPVFIFRIVVA YLLTALVVFLVLLCLDKVPFFEDPLTSIKRIIVITMPASMGAIVVDSFDKE
Sequences:
>Translated_131_residues MTFSFNTEDASQVCVGAFALAVPVAFSEEAWHLGETLPVLNLAMLFSLSLLFLGVFTYHSVFQQNISARVPVFIFRIVVA YLLTALVVFLVLLCLDKVPFFEDPLTSIKRIIVITMPASMGAIVVDSFDKE >Mature_130_residues TFSFNTEDASQVCVGAFALAVPVAFSEEAWHLGETLPVLNLAMLFSLSLLFLGVFTYHSVFQQNISARVPVFIFRIVVAY LLTALVVFLVLLCLDKVPFFEDPLTSIKRIIVITMPASMGAIVVDSFDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14495; Mature: 14364
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSFNTEDASQVCVGAFALAVPVAFSEEAWHLGETLPVLNLAMLFSLSLLFLGVFTYHS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VFQQNISARVPVFIFRIVVAYLLTALVVFLVLLCLDKVPFFEDPLTSIKRIIVITMPASM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCC GAIVVDSFDKE CCCEECCCCCC >Mature Secondary Structure TFSFNTEDASQVCVGAFALAVPVAFSEEAWHLGETLPVLNLAMLFSLSLLFLGVFTYHS CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VFQQNISARVPVFIFRIVVAYLLTALVVFLVLLCLDKVPFFEDPLTSIKRIIVITMPASM HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCC GAIVVDSFDKE CCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA