Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160876968
Identifier: 160876968
GI number: 160876968
Start: 4554405
End: 4555106
Strand: Reverse
Name: 160876968
Synonym: Sbal195_3864
Alternate gene names: NA
Gene position: 4555106-4554405 (Counterclockwise)
Preceding gene: 160876969
Following gene: 160876963
Centisome position: 85.19
GC content: 44.59
Gene sequence:
>702_bases ATGTTTCTAGCGCCTTATTTTTCCGAGCAAAATCAAGCCATTTCCGTATCCGCACAACAAGCCAGCGACTTCGCGAAGAA AATTGCGCAGGACTTTAATCCCATACACAATGTGGGCGCAAAACGCTTTTGCGTGCCGGGAGATTTACTGTTTGCCATAG TATTGACTCAATATGGTCTGAGTCAGAGCATGAAATTTAGCTTTGCGGGTATGGTGGGCGCGAGTGTCGAACTGCAATTC CCGGAACAAGTGAGCGAGAGTTTTTCAATTCGCGATGGCCGCGAAAAAACCTATCTTAATGTGAGCCGTCAAGGCGATGT AAGTTGTTGCGATGCGCAGACAGAATCCTTTATTCGTCAATATGTTGCTTTCTCTGGGCATAATTTTATCGATATCCTGA TCCCTTTGATGAAACAACATCAAGTGATGATCAACCCAGACCGACCTTTAGTGATTTACGAAAGCATGTCGTTTGACTTA ACCACCCTCGATTTTGTGCAAGTGACCTTATCACTCGTTGACCAAGATTTAAAAATCGATGGTAAACGTGGCGATGTGAC ACTGCACTTTGAATTACACAGTGGCGATACTTTAGTCGGCACAGGTATCAAAACCTTAGTCATGAGTGGATTACGTCCTT ATGACGAGGCGCTGGCGCAGCAAATGTGCGCCACCTATGAAGGTAGTAAAACTGATTATTGA
Upstream 100 bases:
>100_bases TGGGATCAAGTCATCGGGTGAGTTAAATACCTAATTTAAGGTAGACTCGTGATAATTTTGTTATCCATCCCTGTATTGAG TTATTACAAATAGAGTTTAT
Downstream 100 bases:
>100_bases TTGACGGAACAGTCACATGGCGTTTTGTCTGCAGATAAAGCGCCATGCAATCCTTGATAGCGCGATGAAATGCGAGGGGA TTAATGACCGTTGATTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MFLAPYFSEQNQAISVSAQQASDFAKKIAQDFNPIHNVGAKRFCVPGDLLFAIVLTQYGLSQSMKFSFAGMVGASVELQF PEQVSESFSIRDGREKTYLNVSRQGDVSCCDAQTESFIRQYVAFSGHNFIDILIPLMKQHQVMINPDRPLVIYESMSFDL TTLDFVQVTLSLVDQDLKIDGKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYDEALAQQMCATYEGSKTDY
Sequences:
>Translated_233_residues MFLAPYFSEQNQAISVSAQQASDFAKKIAQDFNPIHNVGAKRFCVPGDLLFAIVLTQYGLSQSMKFSFAGMVGASVELQF PEQVSESFSIRDGREKTYLNVSRQGDVSCCDAQTESFIRQYVAFSGHNFIDILIPLMKQHQVMINPDRPLVIYESMSFDL TTLDFVQVTLSLVDQDLKIDGKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYDEALAQQMCATYEGSKTDY >Mature_233_residues MFLAPYFSEQNQAISVSAQQASDFAKKIAQDFNPIHNVGAKRFCVPGDLLFAIVLTQYGLSQSMKFSFAGMVGASVELQF PEQVSESFSIRDGREKTYLNVSRQGDVSCCDAQTESFIRQYVAFSGHNFIDILIPLMKQHQVMINPDRPLVIYESMSFDL TTLDFVQVTLSLVDQDLKIDGKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYDEALAQQMCATYEGSKTDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25969; Mature: 25969
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLAPYFSEQNQAISVSAQQASDFAKKIAQDFNPIHNVGAKRFCVPGDLLFAIVLTQYGL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCCCEEECCHHHHHHHHHHHHCC SQSMKFSFAGMVGASVELQFPEQVSESFSIRDGREKTYLNVSRQGDVSCCDAQTESFIRQ CCCCCEEEHEEECCEEEEECHHHHHHCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHH YVAFSGHNFIDILIPLMKQHQVMINPDRPLVIYESMSFDLTTLDFVQVTLSLVDQDLKID HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEC GKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYDEALAQQMCATYEGSKTDY CCCCCEEEEEEECCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLAPYFSEQNQAISVSAQQASDFAKKIAQDFNPIHNVGAKRFCVPGDLLFAIVLTQYGL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHCCCCEEECCHHHHHHHHHHHHCC SQSMKFSFAGMVGASVELQFPEQVSESFSIRDGREKTYLNVSRQGDVSCCDAQTESFIRQ CCCCCEEEHEEECCEEEEECHHHHHHCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHH YVAFSGHNFIDILIPLMKQHQVMINPDRPLVIYESMSFDLTTLDFVQVTLSLVDQDLKID HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEC GKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYDEALAQQMCATYEGSKTDY CCCCCEEEEEEECCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA