| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yibF [C]
Identifier: 160876923
GI number: 160876923
Start: 4500457
End: 4501053
Strand: Reverse
Name: yibF [C]
Synonym: Sbal195_3819
Alternate gene names: 160876923
Gene position: 4501053-4500457 (Counterclockwise)
Preceding gene: 160876924
Following gene: 160876921
Centisome position: 84.17
GC content: 45.9
Gene sequence:
>597_bases ATGAAGTTGTTAAGTTCTCAAGCTTCACCCTATGCCCGTTGTGTTAGAGCCTTAATCCAGTATTTAGGGATTAACAATAT TGAAGAGCTGCTAGTCAATCCCTTTGAAAACAGTGCCGAATTACTCGATGCCAACCCGTTAGGACAGATCCCGTGTCTTA TCACCAACGATGGCGTGGCACTATTCGATAGCGAAGTGATTATGCGTTACCTAGATGCTGAGCTTGGCGATCGTAAGATG TTTGGGATCTCAAGTCATAACTGGGTGTTGGAGTGTCAGTATTCCTTGATAAAAGGTTTAATCGATAGCGCGGTAAAATT GCGCCAAGAGCAGATGCGTGAAGATGAAGGTGTGAGATCGGCTTTTTGGACGGCCCGTTTTGAACAAGCATTGCTGCGTG GACTTATGCAGGTTGAACTGCAAACCGTGATCACACAAACCACGATTCAGGCACCGCAATTAGCCTTGATTTGCTTGCTT GATTATGTGGACTTTAGACATCCAGAGTTAGATTGGCGCAAGGTTGCCCCAGCGACGGCACTTTGGTTTAGTGAGATGCG TGATCTACCCGCATTTATTCAAACACGTCCCCAGTAA
Upstream 100 bases:
>100_bases GAAAAATATTGGTGATCCCATTTTATATGGGCGGTGAGAGTAAACAGTTTTCACCCCTTAATAGCCATAGCGTTTAATGC AAATAAAAGGAAATTTTTTG
Downstream 100 bases:
>100_bases CTGGATGAAGATGCTCAGCCGTCGGTTGCGCGTCTTCCCTTTGGTCTATCACGGCGGTTTTGTTCTCCAAAAGCGCCGAA TAAATCCCGCGTGACCCCGT
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Related Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Gst Glutathione S-Transferase; Gst Protein; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione Transferase
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKLLSSQASPYARCVRALIQYLGINNIEELLVNPFENSAELLDANPLGQIPCLITNDGVALFDSEVIMRYLDAELGDRKM FGISSHNWVLECQYSLIKGLIDSAVKLRQEQMREDEGVRSAFWTARFEQALLRGLMQVELQTVITQTTIQAPQLALICLL DYVDFRHPELDWRKVAPATALWFSEMRDLPAFIQTRPQ
Sequences:
>Translated_198_residues MKLLSSQASPYARCVRALIQYLGINNIEELLVNPFENSAELLDANPLGQIPCLITNDGVALFDSEVIMRYLDAELGDRKM FGISSHNWVLECQYSLIKGLIDSAVKLRQEQMREDEGVRSAFWTARFEQALLRGLMQVELQTVITQTTIQAPQLALICLL DYVDFRHPELDWRKVAPATALWFSEMRDLPAFIQTRPQ >Mature_198_residues MKLLSSQASPYARCVRALIQYLGINNIEELLVNPFENSAELLDANPLGQIPCLITNDGVALFDSEVIMRYLDAELGDRKM FGISSHNWVLECQYSLIKGLIDSAVKLRQEQMREDEGVRSAFWTARFEQALLRGLMQVELQTVITQTTIQAPQLALICLL DYVDFRHPELDWRKVAPATALWFSEMRDLPAFIQTRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22603; Mature: 22603
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLSSQASPYARCVRALIQYLGINNIEELLVNPFENSAELLDANPLGQIPCLITNDGVA CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCH LFDSEVIMRYLDAELGDRKMFGISSHNWVLECQYSLIKGLIDSAVKLRQEQMREDEGVRS HHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWTARFEQALLRGLMQVELQTVITQTTIQAPQLALICLLDYVDFRHPELDWRKVAPATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHH LWFSEMRDLPAFIQTRPQ HHHHHHHCCHHHHCCCCC >Mature Secondary Structure MKLLSSQASPYARCVRALIQYLGINNIEELLVNPFENSAELLDANPLGQIPCLITNDGVA CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCH LFDSEVIMRYLDAELGDRKMFGISSHNWVLECQYSLIKGLIDSAVKLRQEQMREDEGVRS HHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWTARFEQALLRGLMQVELQTVITQTTIQAPQLALICLLDYVDFRHPELDWRKVAPATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHH LWFSEMRDLPAFIQTRPQ HHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA