| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876873
Identifier: 160876873
GI number: 160876873
Start: 4442430
End: 4443872
Strand: Reverse
Name: 160876873
Synonym: Sbal195_3769
Alternate gene names: NA
Gene position: 4443872-4442430 (Counterclockwise)
Preceding gene: 160876877
Following gene: 160876872
Centisome position: 83.11
GC content: 48.72
Gene sequence:
>1443_bases ATGCTCACTCATCGAATCACTTGGCCTAAGGCTTTACTCGCGGGCATGGTTGCCATGCCGATCTCTGGCTGCAGCAATCC TCAACCTATGGCCATTATTGAAAGCAATAACGAGTCATTGCTGCAGTTCGATAACGGTAAACTCATCCAATTTAAGGAAA AACCGAGTCCGCAGTATCGCCATATTCCCTGTGATTTACCGGCAGTAAGTTCCGTGATAGCAAATGATATGGCAGTGGCT GCCATCACCCAAAATGGCGATGTGATCACTTGGGGAAATAGTTTTAGCGGCGGCGATAGCCGCGAAGTTGCTGCGGAGCT TAAACACATTAAACAAGTCGTGCCTGTAAAGGAAGGTTTTGCCGCCCTGCGTGAAGATGGCACTGTGGTGTACTGGGGAC GTGCAGGGAAACTGAGTCTCGACAAAGCCCTGCAAAGCCGTATGACAAACATCACTAAACTCTATGCTAACCGTGAGGCG GTAGCCGCACTCGATGCCAGTGGAAAAGTGCACACTTGGGGTTATGGGCCCGAAGGCGGCAATAGCCAGCATGTGCAGGA TAAACTGGTGGATATAGTTGATATCTTTGCCGAAGGACGAAGTTTTACGGCACTTAAGAAAGACGGCAGCACTGTGATTT GGGGGCAAGTTGAACGTTCAACCAATATGAAAAAGCTGCTGCCGCAGTTAATGGATGTTGTGCGTGTTGAGTATACCCAA GGGACCTATGCCGCTTTGAAAAAGGATGGCAGTGTCGTGACTTGGGGGCAGAGTAGCGATATTTACCCTATTCGCAGTGC GCTTCAGGATGTCGTGAGTATTACGTCAAATAGCTGTGCTTTTGCAATCTTAAGTCCAGCGGGAGAAGCGCACTTTTGGG GCAATGAAACGAACTGCGGTATCGATTGGCTCAAACAAACAGATATTAAAGGCGTGAACAGTATTGTCAGTGTCGGCACG GGATTTCTGTTGCTGCGTGACAATGCCGTACCGCAAATCCTCGTCGATAACAGTGACTACGCCTATTTATATGGTTTTCA CTATGCCCAAGAGATCCTCAATCAATATTGGCAGGAGGGAAGCAAAATCACCATAGGTTCAGCATCATTTGTATTCACCC GTCCTGACGGCAAAGTCGTGCCAGTAGGCTATAGGGCTAACCTAGAAAATGTCGAGAAGCTCATAGAACGCATCCCGCGA TTAACTTGGTTAGCGAGGGCGGGTGAGGGTTATGTCGGGATCAGTGAAAAGGGGGAATGGGTCTCTTGGTCGATGAATAA CGAGATGTTCGCCAAATCTCCGCTGCAGCCAGCCGATTCGTTGGTGATTAAGCCGCTGGATTTTACCCCTGTTACCCAAT GCGAAACGCAAGAGCAACGGCAGGCGATTCTGAGTCAGGAAAGGCCTAAACCTGAAGTAAAAATGTGGTTATTTAGCGAA TAG
Upstream 100 bases:
>100_bases GCCCGTTTTTGACACTAGGCGATGTTAGGTTAATCCATTCTTGCTCTGTCTGCTGCACAACATTGAATGACATATCCAAG CAAATACAAGGAAATAAGTA
Downstream 100 bases:
>100_bases CATTCACCTCTTTTACCATCACGGCGCAGATAAACGGAGTATTTCTCTGTTATTTACACCGTGATAGTGATTATTTCTTT TAAAGTGGCAGTTAATCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MLTHRITWPKALLAGMVAMPISGCSNPQPMAIIESNNESLLQFDNGKLIQFKEKPSPQYRHIPCDLPAVSSVIANDMAVA AITQNGDVITWGNSFSGGDSREVAAELKHIKQVVPVKEGFAALREDGTVVYWGRAGKLSLDKALQSRMTNITKLYANREA VAALDASGKVHTWGYGPEGGNSQHVQDKLVDIVDIFAEGRSFTALKKDGSTVIWGQVERSTNMKKLLPQLMDVVRVEYTQ GTYAALKKDGSVVTWGQSSDIYPIRSALQDVVSITSNSCAFAILSPAGEAHFWGNETNCGIDWLKQTDIKGVNSIVSVGT GFLLLRDNAVPQILVDNSDYAYLYGFHYAQEILNQYWQEGSKITIGSASFVFTRPDGKVVPVGYRANLENVEKLIERIPR LTWLARAGEGYVGISEKGEWVSWSMNNEMFAKSPLQPADSLVIKPLDFTPVTQCETQEQRQAILSQERPKPEVKMWLFSE
Sequences:
>Translated_480_residues MLTHRITWPKALLAGMVAMPISGCSNPQPMAIIESNNESLLQFDNGKLIQFKEKPSPQYRHIPCDLPAVSSVIANDMAVA AITQNGDVITWGNSFSGGDSREVAAELKHIKQVVPVKEGFAALREDGTVVYWGRAGKLSLDKALQSRMTNITKLYANREA VAALDASGKVHTWGYGPEGGNSQHVQDKLVDIVDIFAEGRSFTALKKDGSTVIWGQVERSTNMKKLLPQLMDVVRVEYTQ GTYAALKKDGSVVTWGQSSDIYPIRSALQDVVSITSNSCAFAILSPAGEAHFWGNETNCGIDWLKQTDIKGVNSIVSVGT GFLLLRDNAVPQILVDNSDYAYLYGFHYAQEILNQYWQEGSKITIGSASFVFTRPDGKVVPVGYRANLENVEKLIERIPR LTWLARAGEGYVGISEKGEWVSWSMNNEMFAKSPLQPADSLVIKPLDFTPVTQCETQEQRQAILSQERPKPEVKMWLFSE >Mature_480_residues MLTHRITWPKALLAGMVAMPISGCSNPQPMAIIESNNESLLQFDNGKLIQFKEKPSPQYRHIPCDLPAVSSVIANDMAVA AITQNGDVITWGNSFSGGDSREVAAELKHIKQVVPVKEGFAALREDGTVVYWGRAGKLSLDKALQSRMTNITKLYANREA VAALDASGKVHTWGYGPEGGNSQHVQDKLVDIVDIFAEGRSFTALKKDGSTVIWGQVERSTNMKKLLPQLMDVVRVEYTQ GTYAALKKDGSVVTWGQSSDIYPIRSALQDVVSITSNSCAFAILSPAGEAHFWGNETNCGIDWLKQTDIKGVNSIVSVGT GFLLLRDNAVPQILVDNSDYAYLYGFHYAQEILNQYWQEGSKITIGSASFVFTRPDGKVVPVGYRANLENVEKLIERIPR LTWLARAGEGYVGISEKGEWVSWSMNNEMFAKSPLQPADSLVIKPLDFTPVTQCETQEQRQAILSQERPKPEVKMWLFSE
Specific function: Unknown
COG id: COG5184
COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53010; Mature: 53010
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHRITWPKALLAGMVAMPISGCSNPQPMAIIESNNESLLQFDNGKLIQFKEKPSPQYR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCE HIPCDLPAVSSVIANDMAVAAITQNGDVITWGNSFSGGDSREVAAELKHIKQVVPVKEGF ECCCCCHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHH AALREDGTVVYWGRAGKLSLDKALQSRMTNITKLYANREAVAALDASGKVHTWGYGPEGG HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCC NSQHVQDKLVDIVDIFAEGRSFTALKKDGSTVIWGQVERSTNMKKLLPQLMDVVRVEYTQ CCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEECC GTYAALKKDGSVVTWGQSSDIYPIRSALQDVVSITSNSCAFAILSPAGEAHFWGNETNCG CHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCC IDWLKQTDIKGVNSIVSVGTGFLLLRDNAVPQILVDNSDYAYLYGFHYAQEILNQYWQEG HHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCC SKITIGSASFVFTRPDGKVVPVGYRANLENVEKLIERIPRLTWLARAGEGYVGISEKGEW CEEEEECEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCHHEEEHHCCCCEEEECCCCCE VSWSMNNEMFAKSPLQPADSLVIKPLDFTPVTQCETQEQRQAILSQERPKPEVKMWLFSE EEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MLTHRITWPKALLAGMVAMPISGCSNPQPMAIIESNNESLLQFDNGKLIQFKEKPSPQYR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCE HIPCDLPAVSSVIANDMAVAAITQNGDVITWGNSFSGGDSREVAAELKHIKQVVPVKEGF ECCCCCHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHH AALREDGTVVYWGRAGKLSLDKALQSRMTNITKLYANREAVAALDASGKVHTWGYGPEGG HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCC NSQHVQDKLVDIVDIFAEGRSFTALKKDGSTVIWGQVERSTNMKKLLPQLMDVVRVEYTQ CCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEECC GTYAALKKDGSVVTWGQSSDIYPIRSALQDVVSITSNSCAFAILSPAGEAHFWGNETNCG CHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCC IDWLKQTDIKGVNSIVSVGTGFLLLRDNAVPQILVDNSDYAYLYGFHYAQEILNQYWQEG HHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCC SKITIGSASFVFTRPDGKVVPVGYRANLENVEKLIERIPRLTWLARAGEGYVGISEKGEW CEEEEECEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCHHEEEHHCCCCEEEECCCCCE VSWSMNNEMFAKSPLQPADSLVIKPLDFTPVTQCETQEQRQAILSQERPKPEVKMWLFSE EEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA