Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876865

Identifier: 160876865

GI number: 160876865

Start: 4430532

End: 4431329

Strand: Reverse

Name: 160876865

Synonym: Sbal195_3761

Alternate gene names: NA

Gene position: 4431329-4430532 (Counterclockwise)

Preceding gene: 160876867

Following gene: 160876863

Centisome position: 82.87

GC content: 47.62

Gene sequence:

>798_bases
ATGCTGAGTGCGTTTTCTCCTAGGGCATTTCTTCTTGCGATGAGTCTGTTAGGCCTAATGCCTAATCTTGTTTTTGCTGT
GCCTGATAAGTTGAAATTGGTGACCGAAGCTTGGCCTCCCATGAGTTACGAGCAAGATGGCGTTCCCCATGGTTTTGCAG
TGGACTTAGTGAATACCCTGCAATCGAGACTGGGACAGAGCGAGAAAATCGAGGTCTTACCTTGGGCACGGGCGTATTCG
ATTGCTAATACCGCGGCGAATGTCTTACTTTTTGCGACGTCTATTAATGACGAGCGTGAAGATCATTTCGATTTTATCGG
CCCGATTGCAACCAGCAAAATTGCTTTGTATGCGAGGGCGGCAGATCCCATCGCGCTCGAGCAACTTGCTGAACTGCAAT
CTAAAGATATTGTCGGGGTTTATCGAGAATCTGCTGGGGCGCAGCTGTTACAACAAGCGGGCGTGGATAATTTGCTGGTG
GCGAGTTTTCCGCAGCAATCGGCTAAGCAATTACTGTTCTCTCGAATTCGTTTATGGTGCCAAGCGGATCTTGCGGTTAA
GCAGATACTCGAAGAAGTGGGCGCTAGTGAGGCCGATATACGCCAAGTGTATGTCGTATCAGAGATTAATCTGTATTTAG
CCTTTTCTAAAGGGACGTCGGCGGCTACGGTCACGAGTTGGCAAACAGAGCTTGAGAAAATGAAAGACTCAGGGGAGTTT
AGTCGTTTATATCAGACATGGTTTGGTGCTTTACCGCCGCCATTACAGCATCAAGTGTTTTGGCATAAAAGCGTTTAA

Upstream 100 bases:

>100_bases
AGTGAGCATGAATGAGGCGCGATTTTCTTTAGGCAATATGTTTATTTGCAGTTGAGATTGAGTCTATGATTAGGTTTAAT
GTTTCGCTTTTGGTATCAGT

Downstream 100 bases:

>100_bases
CTCTCGCTCACAGCTTCATTTCTGGCAGCTTTAACACAATTCCTTCCCGCATTTTTAGCCTCATAAAGGGCGTCGTCGGC
ACGTTTCAGTAGGCTGGCAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; Periplasmic Protein; Amino Acid ABC Transporter; ABC-Type Amino Acid Transporter; Cache Sensor Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS
IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV
ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF
SRLYQTWFGALPPPLQHQVFWHKSV

Sequences:

>Translated_265_residues
MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS
IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV
ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF
SRLYQTWFGALPPPLQHQVFWHKSV
>Mature_265_residues
MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS
IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV
ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF
SRLYQTWFGALPPPLQHQVFWHKSV

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29359; Mature: 29359

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
QSRLGQSEKIEVLPWARAYSIANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARA
HHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEC
ADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLVASFPQQSAKQLLFSRIRLWC
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
QADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF
HHHHHHHHHHHHHCCCCCHHHEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCHH
SRLYQTWFGALPPPLQHQVFWHKSV
HHHHHHHHCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
QSRLGQSEKIEVLPWARAYSIANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARA
HHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEC
ADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLVASFPQQSAKQLLFSRIRLWC
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
QADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF
HHHHHHHHHHHHHCCCCCHHHEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCHH
SRLYQTWFGALPPPLQHQVFWHKSV
HHHHHHHHCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA