| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876865
Identifier: 160876865
GI number: 160876865
Start: 4430532
End: 4431329
Strand: Reverse
Name: 160876865
Synonym: Sbal195_3761
Alternate gene names: NA
Gene position: 4431329-4430532 (Counterclockwise)
Preceding gene: 160876867
Following gene: 160876863
Centisome position: 82.87
GC content: 47.62
Gene sequence:
>798_bases ATGCTGAGTGCGTTTTCTCCTAGGGCATTTCTTCTTGCGATGAGTCTGTTAGGCCTAATGCCTAATCTTGTTTTTGCTGT GCCTGATAAGTTGAAATTGGTGACCGAAGCTTGGCCTCCCATGAGTTACGAGCAAGATGGCGTTCCCCATGGTTTTGCAG TGGACTTAGTGAATACCCTGCAATCGAGACTGGGACAGAGCGAGAAAATCGAGGTCTTACCTTGGGCACGGGCGTATTCG ATTGCTAATACCGCGGCGAATGTCTTACTTTTTGCGACGTCTATTAATGACGAGCGTGAAGATCATTTCGATTTTATCGG CCCGATTGCAACCAGCAAAATTGCTTTGTATGCGAGGGCGGCAGATCCCATCGCGCTCGAGCAACTTGCTGAACTGCAAT CTAAAGATATTGTCGGGGTTTATCGAGAATCTGCTGGGGCGCAGCTGTTACAACAAGCGGGCGTGGATAATTTGCTGGTG GCGAGTTTTCCGCAGCAATCGGCTAAGCAATTACTGTTCTCTCGAATTCGTTTATGGTGCCAAGCGGATCTTGCGGTTAA GCAGATACTCGAAGAAGTGGGCGCTAGTGAGGCCGATATACGCCAAGTGTATGTCGTATCAGAGATTAATCTGTATTTAG CCTTTTCTAAAGGGACGTCGGCGGCTACGGTCACGAGTTGGCAAACAGAGCTTGAGAAAATGAAAGACTCAGGGGAGTTT AGTCGTTTATATCAGACATGGTTTGGTGCTTTACCGCCGCCATTACAGCATCAAGTGTTTTGGCATAAAAGCGTTTAA
Upstream 100 bases:
>100_bases AGTGAGCATGAATGAGGCGCGATTTTCTTTAGGCAATATGTTTATTTGCAGTTGAGATTGAGTCTATGATTAGGTTTAAT GTTTCGCTTTTGGTATCAGT
Downstream 100 bases:
>100_bases CTCTCGCTCACAGCTTCATTTCTGGCAGCTTTAACACAATTCCTTCCCGCATTTTTAGCCTCATAAAGGGCGTCGTCGGC ACGTTTCAGTAGGCTGGCAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; Periplasmic Protein; Amino Acid ABC Transporter; ABC-Type Amino Acid Transporter; Cache Sensor Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF SRLYQTWFGALPPPLQHQVFWHKSV
Sequences:
>Translated_265_residues MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF SRLYQTWFGALPPPLQHQVFWHKSV >Mature_265_residues MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTLQSRLGQSEKIEVLPWARAYS IANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARAADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLV ASFPQQSAKQLLFSRIRLWCQADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF SRLYQTWFGALPPPLQHQVFWHKSV
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29359; Mature: 29359
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH QSRLGQSEKIEVLPWARAYSIANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARA HHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEC ADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLVASFPQQSAKQLLFSRIRLWC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH QADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF HHHHHHHHHHHHHCCCCCHHHEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCHH SRLYQTWFGALPPPLQHQVFWHKSV HHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure MLSAFSPRAFLLAMSLLGLMPNLVFAVPDKLKLVTEAWPPMSYEQDGVPHGFAVDLVNTL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH QSRLGQSEKIEVLPWARAYSIANTAANVLLFATSINDEREDHFDFIGPIATSKIALYARA HHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEC ADPIALEQLAELQSKDIVGVYRESAGAQLLQQAGVDNLLVASFPQQSAKQLLFSRIRLWC CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH QADLAVKQILEEVGASEADIRQVYVVSEINLYLAFSKGTSAATVTSWQTELEKMKDSGEF HHHHHHHHHHHHHCCCCCHHHEEEEEEEEEEEEEECCCCCCEEHHHHHHHHHHHHCCCHH SRLYQTWFGALPPPLQHQVFWHKSV HHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA