| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876862
Identifier: 160876862
GI number: 160876862
Start: 4427462
End: 4427896
Strand: Reverse
Name: 160876862
Synonym: Sbal195_3758
Alternate gene names: NA
Gene position: 4427896-4427462 (Counterclockwise)
Preceding gene: 160876863
Following gene: 160876857
Centisome position: 82.81
GC content: 45.98
Gene sequence:
>435_bases ATGAGTGAATTATCAGCTGTTTACCGTGAAACTGCCGAGCAGATTTCTTACAATGTTGCGAATAAAGTGCTGCCAATGGC AAAACTTCCGGATGGATTATTGGCTGCATATCAAAGCCTGTGCGCTGAACTGTTGGAAGACAGAGAGGGCAAATTTAGCC AAGCTTGGGCATCTTTACCTGCTAGCGCGCGTAATCTTATGGAGCAAGCCGCATTCCACGGTTTTTATATTGCGAATGCT TGGTTGCAGTTGAGCCGTGTTGCCCAAGAGATTTCTGAGCAGGCCGATACCGATGGTGAAATCCAAGAGCAAGAATATAA CGGTATCTTCACCCGTTTAGCCGATGAGTCGCTCAAAGAAAGTCTACGCAAATTGAAAAAAGCACGTACCGATCGCTCTA TGCTCAATAGCTTTAAACAGGTGATGGCGCCTTAG
Upstream 100 bases:
>100_bases AATTACTGTCACACCGATAGCAGGTAACGGCGTTTATGGTTTATATGTGAGTGGTCAGTTTTAAGTCTATTTTTTGAATG AATGTTAATCGAGATTTTTT
Downstream 100 bases:
>100_bases TTTTTATTGAAATAAGCGCTGAGTCTGAAAATTAAAAAGCCCGTCACTTTGCAGTGACGGGCTTTTTGCTGGCACAAACC CTTAGCTAAAGCTGCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSELSAVYRETAEQISYNVANKVLPMAKLPDGLLAAYQSLCAELLEDREGKFSQAWASLPASARNLMEQAAFHGFYIANA WLQLSRVAQEISEQADTDGEIQEQEYNGIFTRLADESLKESLRKLKKARTDRSMLNSFKQVMAP
Sequences:
>Translated_144_residues MSELSAVYRETAEQISYNVANKVLPMAKLPDGLLAAYQSLCAELLEDREGKFSQAWASLPASARNLMEQAAFHGFYIANA WLQLSRVAQEISEQADTDGEIQEQEYNGIFTRLADESLKESLRKLKKARTDRSMLNSFKQVMAP >Mature_143_residues SELSAVYRETAEQISYNVANKVLPMAKLPDGLLAAYQSLCAELLEDREGKFSQAWASLPASARNLMEQAAFHGFYIANAW LQLSRVAQEISEQADTDGEIQEQEYNGIFTRLADESLKESLRKLKKARTDRSMLNSFKQVMAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16194; Mature: 16063
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELSAVYRETAEQISYNVANKVLPMAKLPDGLLAAYQSLCAELLEDREGKFSQAWASLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC ASARNLMEQAAFHGFYIANAWLQLSRVAQEISEQADTDGEIQEQEYNGIFTRLADESLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SLRKLKKARTDRSMLNSFKQVMAP HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SELSAVYRETAEQISYNVANKVLPMAKLPDGLLAAYQSLCAELLEDREGKFSQAWASLP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC ASARNLMEQAAFHGFYIANAWLQLSRVAQEISEQADTDGEIQEQEYNGIFTRLADESLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SLRKLKKARTDRSMLNSFKQVMAP HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA